RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 PTPRNQ16849 979 aa9.42□□□□□ -0.9
CUL3-216ENST00000617432 ZNF511Q8NB15 262 aa9.42□□□□□ -0.9
CUL3-216ENST00000617432 DNMT3AQ9Y6K1 912 aaPredicted RBP9.42□□□□□ -0.9
CUL3-216ENST00000617432 KRT76Q01546 638 aa9.4□□□□□ -0.9
CUL3-216ENST00000617432 KCNH2Q12809 1159 aa9.4□□□□□ -0.9
CUL3-216ENST00000617432 GPAT2Q6NUI2 795 aa9.4□□□□□ -0.9
CUL3-216ENST00000617432 CNTNAP3BQ96NU0 1288 aa9.4□□□□□ -0.9
CUL3-216ENST00000617432 CNTNAP3Q9BZ76 1288 aa9.4□□□□□ -0.9
CUL3-216ENST00000617432 UNC13AQ9UPW8 1703 aa9.4□□□□□ -0.91
CUL3-216ENST00000617432 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
CUL3-216ENST00000617432 C6orf118Q5T5N4 469 aa9.39□□□□□ -0.91
CUL3-216ENST00000617432 GPIHBP1Q8IV16 184 aa9.39□□□□□ -0.91
CUL3-216ENST00000617432 ZIC2O95409 532 aaPredicted RBP9.39□□□□□ -0.91
CUL3-216ENST00000617432 FOXK2Q01167 660 aa9.39□□□□□ -0.91
CUL3-216ENST00000617432 NUTM1Q86Y26 1132 aa9.39□□□□□ -0.91
CUL3-216ENST00000617432 FAM174AQ8TBP5 190 aa9.39□□□□□ -0.91
CUL3-216ENST00000617432 C6orf229H3BNL8 230 aa9.38□□□□□ -0.91
CUL3-216ENST00000617432 GPR161Q8N6U8 529 aaKnown RBP9.38□□□□□ -0.91
CUL3-216ENST00000617432 CDK15Q96Q40 435 aa9.38□□□□□ -0.91
CUL3-216ENST00000617432 UPP2O95045 317 aa9.37□□□□□ -0.91
CUL3-216ENST00000617432 FDX1P10109 184 aa9.37□□□□□ -0.91
CUL3-216ENST00000617432 MAP2K5Q13163 448 aa9.37□□□□□ -0.91
CUL3-216ENST00000617432 ZFAND3Q9H8U3 227 aa9.37□□□□□ -0.91
CUL3-216ENST00000617432 BMP2P12643 396 aa9.36□□□□□ -0.91
CUL3-216ENST00000617432 XP32Q5T750 250 aa9.36□□□□□ -0.91
CUL3-216ENST00000617432 ZNF385CQ66K41 422 aaPredicted RBP9.36□□□□□ -0.91
CUL3-216ENST00000617432 MYO15BQ96JP2 1530 aa9.35□□□□□ -0.91
CUL3-216ENST00000617432 SOS2Q07890 1332 aaPredicted RBP9.35□□□□□ -0.91
CUL3-216ENST00000617432 IRS1P35568 1242 aa9.35□□□□□ -0.91
CUL3-216ENST00000617432 KANK3Q6NY19 840 aa9.35□□□□□ -0.91
CUL3-216ENST00000617432 ITPKCQ96DU7 683 aa9.35□□□□□ -0.91
CUL3-216ENST00000617432 RTN4Q9NQC3 1192 aaKnown RBP9.35□□□□□ -0.91
CUL3-216ENST00000617432 PCDHGC3Q9UN70 934 aa9.35□□□□□ -0.91
CUL3-216ENST00000617432 NR5A1Q13285 461 aa9.34□□□□□ -0.91
CUL3-216ENST00000617432 IRF6O14896 467 aa9.33□□□□□ -0.92
CUL3-216ENST00000617432 LINC00528Q8N1L1 170 aa9.33□□□□□ -0.92
CUL3-216ENST00000617432 SVOPQ8N4V2 548 aa9.33□□□□□ -0.92
CUL3-216ENST00000617432 COL25A1Q9BXS0 654 aaPredicted RBP9.33□□□□□ -0.92
CUL3-216ENST00000617432 BICRAQ9NZM4 1560 aa9.33□□□□□ -0.92
CUL3-216ENST00000617432 NANOS1Q8WY41 292 aaKnown RBP9.32□□□□□ -0.92
CUL3-216ENST00000617432 DNMT3LQ9UJW3 386 aa9.32□□□□□ -0.92
CUL3-216ENST00000617432 SPTLC1O15269 473 aa9.31□□□□□ -0.92
CUL3-216ENST00000617432 ARHGEF15O94989 841 aa9.31□□□□□ -0.92
CUL3-216ENST00000617432 ARID5BQ14865 1188 aa9.31□□□□□ -0.92
CUL3-216ENST00000617432 DESI1Q6ICB0 168 aa9.31□□□□□ -0.92
CUL3-216ENST00000617432 FAM217BQ9NTX9 383 aaPredicted RBP9.31□□□□□ -0.92
CUL3-216ENST00000617432 MARSP56192 900 aaKnown RBP9.31□□□□□ -0.92
CUL3-216ENST00000617432 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.31□□□□□ -0.92
CUL3-216ENST00000617432 MEIOBQ8N635 442 aa9.31□□□□□ -0.92
CUL3-216ENST00000617432 GPCPD1Q9NPB8 672 aa9.31□□□□□ -0.92
CUL3-216ENST00000617432 DCAF1Q9Y4B6 1507 aa9.3□□□□□ -0.92
CUL3-216ENST00000617432 NR3C2P08235 984 aa9.3□□□□□ -0.92
CUL3-216ENST00000617432 CLCN1P35523 988 aa9.3□□□□□ -0.92
CUL3-216ENST00000617432 SCARF2Q96GP6 870 aaPredicted RBP9.3□□□□□ -0.92
CUL3-216ENST00000617432 SLURP2P0DP57 97 aa9.29□□□□□ -0.92
CUL3-216ENST00000617432 PRR7Q8TB68 274 aa9.29□□□□□ -0.92
CUL3-216ENST00000617432 MINK1Q8N4C8 1332 aaPredicted RBP9.28□□□□□ -0.92
CUL3-216ENST00000617432 SCRIBQ14160 1630 aa9.28□□□□□ -0.92
CUL3-216ENST00000617432 SPDYE5A6NIY4 337 aa9.27□□□□□ -0.93
CUL3-216ENST00000617432 GRM5P41594 1212 aa9.27□□□□□ -0.93
CUL3-216ENST00000617432 PTSQ03393 145 aa9.27□□□□□ -0.93
CUL3-216ENST00000617432 WHAMMQ8TF30 809 aa9.27□□□□□ -0.93
CUL3-216ENST00000617432 TSEN34Q9BSV6 310 aaKnown RBP9.27□□□□□ -0.93
CUL3-216ENST00000617432 RNFT1Q5M7Z0 435 aa9.26□□□□□ -0.93
CUL3-216ENST00000617432 FOXJ1Q92949 421 aa9.26□□□□□ -0.93
CUL3-216ENST00000617432 CTHP32929 405 aa9.25□□□□□ -0.93
CUL3-216ENST00000617432 TTLL8A6PVC2 850 aa9.24□□□□□ -0.93
CUL3-216ENST00000617432 ADAM23O75077 832 aa9.23□□□□□ -0.93
CUL3-216ENST00000617432 MTMR2Q13614 643 aa9.22□□□□□ -0.93
CUL3-216ENST00000617432 LYPD8Q6UX82 237 aa9.22□□□□□ -0.93
CUL3-216ENST00000617432 CCDC155Q8N6L0 562 aa9.22□□□□□ -0.93
CUL3-216ENST00000617432 SPIRE2Q8WWL2 714 aa9.22□□□□□ -0.93
CUL3-216ENST00000617432 MSTNO14793 375 aa9.21□□□□□ -0.94
CUL3-216ENST00000617432 NDUFV2P19404 249 aa9.21□□□□□ -0.94
CUL3-216ENST00000617432 AGERQ15109 404 aa9.2□□□□□ -0.94
CUL3-216ENST00000617432 BPHLQ86WA6 291 aaPredicted RBP9.2□□□□□ -0.94
CUL3-216ENST00000617432 KRI1Q8N9T8 703 aaKnown RBP9.2□□□□□ -0.94
CUL3-216ENST00000617432 CCDC102AQ96A19 550 aa9.2□□□□□ -0.94
CUL3-216ENST00000617432 KRTAP4-8Q9BYQ9 185 aa9.2□□□□□ -0.94
CUL3-216ENST00000617432 SLC35F4A4IF30 521 aa9.19□□□□□ -0.94
CUL3-216ENST00000617432 MOXD2PA6NHM9 499 aa9.19□□□□□ -0.94
CUL3-216ENST00000617432 C4orf48Q5BLP8 95 aa9.19□□□□□ -0.94
CUL3-216ENST00000617432 SV2AQ7L0J3 742 aa9.19□□□□□ -0.94
CUL3-216ENST00000617432 VWA5B2Q8N398 1253 aa9.19□□□□□ -0.94
CUL3-216ENST00000617432 FIGNL2A6NMB9 653 aa9.18□□□□□ -0.94
CUL3-216ENST00000617432 EMILIN1Q9Y6C2 1016 aa9.18□□□□□ -0.94
CUL3-216ENST00000617432 ITGA6P23229 1130 aa9.17□□□□□ -0.94
CUL3-216ENST00000617432 F12P00748 615 aaPredicted RBP9.16□□□□□ -0.94
CUL3-216ENST00000617432 MAP3K10Q02779 954 aa9.16□□□□□ -0.94
CUL3-216ENST00000617432 MAP4K5Q9Y4K4 846 aa9.16□□□□□ -0.94
CUL3-216ENST00000617432 PLA2G4EQ3MJ16 856 aa9.15□□□□□ -0.94
CUL3-216ENST00000617432 CDC14CA4D256 554 aa9.14□□□□□ -0.95
CUL3-216ENST00000617432 ADAMTS2O95450 1211 aa9.14□□□□□ -0.95
CUL3-216ENST00000617432 FSHRP23945 695 aa9.14□□□□□ -0.95
CUL3-216ENST00000617432 SSTR3P32745 418 aaPredicted RBP9.14□□□□□ -0.95
CUL3-216ENST00000617432 LYPD4Q6UWN0 246 aa9.14□□□□□ -0.95
CUL3-216ENST00000617432 SPOCK3Q9BQ16 436 aa9.14□□□□□ -0.95
CUL3-216ENST00000617432 C1QTNF2Q9BXJ5 285 aa9.14□□□□□ -0.95
CUL3-216ENST00000617432 MAP10Q9P2G4 905 aa9.14□□□□□ -0.95
CUL3-216ENST00000617432 SPINT1O43278 529 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms