RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 C1orf115Q9H7X2 142 aa22.44■■□□□ 1.18
AC008878.3-201ENST00000617428 CCDC61Q9Y6R9 512 aa22.43■■□□□ 1.18
AC008878.3-201ENST00000617428 DNAJC2Q99543 621 aaKnown RBP22.43■■□□□ 1.18
AC008878.3-201ENST00000617428 TBC1D2BQ9UPU7 963 aa22.43■■□□□ 1.18
AC008878.3-201ENST00000617428 PRM3Q9NNZ6 103 aa22.43■■□□□ 1.18
AC008878.3-201ENST00000617428 SPG7Q9UQ90 795 aa22.43■■□□□ 1.18
AC008878.3-201ENST00000617428 CDC45O75419 566 aa22.42■■□□□ 1.18
AC008878.3-201ENST00000617428 SAFBQ15424 915 aaKnown RBP eCLIP22.42■■□□□ 1.18
AC008878.3-201ENST00000617428 DAPK1P53355 1430 aa22.42■■□□□ 1.18
AC008878.3-201ENST00000617428 PPP1R1BQ9UD71 204 aaPredicted RBP22.42■■□□□ 1.18
AC008878.3-201ENST00000617428 CNTROBQ8N137 903 aa22.41■■□□□ 1.18
AC008878.3-201ENST00000617428 CCDC47Q96A33 483 aaKnown RBP22.41■■□□□ 1.18
AC008878.3-201ENST00000617428 NUDT16Q96DE0 195 aaKnown RBP22.4■■□□□ 1.18
AC008878.3-201ENST00000617428 CHMP5Q9NZZ3 219 aa22.4■■□□□ 1.18
AC008878.3-201ENST00000617428 TPM2P07951 284 aa22.4■■□□□ 1.18
AC008878.3-201ENST00000617428 TOP2BQ02880 1626 aa22.4■■□□□ 1.18
AC008878.3-201ENST00000617428 GNAI2P04899 355 aa22.4■■□□□ 1.18
AC008878.3-201ENST00000617428 CWC22Q9HCG8 908 aaKnown RBP22.4■■□□□ 1.18
AC008878.3-201ENST00000617428 CNNM1Q9NRU3 951 aa22.4■■□□□ 1.18
AC008878.3-201ENST00000617428 NOB1Q9ULX3 412 aaKnown RBP22.4■■□□□ 1.18
AC008878.3-201ENST00000617428 TPM1P09493 284 aa22.4■■□□□ 1.18
AC008878.3-201ENST00000617428 PNISRQ8TF01 805 aaKnown RBP22.39■■□□□ 1.18
AC008878.3-201ENST00000617428 MYL6BP14649 208 aa22.39■■□□□ 1.17
AC008878.3-201ENST00000617428 WAPLQ7Z5K2 1190 aa22.39■■□□□ 1.17
AC008878.3-201ENST00000617428 ATAD2Q6PL18 1390 aa22.38■■□□□ 1.17
AC008878.3-201ENST00000617428 BCAR3O75815 825 aa22.38■■□□□ 1.17
AC008878.3-201ENST00000617428 A0A0U1RQG5 324 aaPredicted RBP22.38■■□□□ 1.17
AC008878.3-201ENST00000617428 SF3B2Q13435 895 aaKnown RBP22.38■■□□□ 1.17
AC008878.3-201ENST00000617428 CCDC43Q96MW1 224 aaKnown RBP22.38■■□□□ 1.17
AC008878.3-201ENST00000617428 CD109Q6YHK3 1445 aa22.38■■□□□ 1.17
AC008878.3-201ENST00000617428 CDK13Q14004 1512 aaKnown RBP22.37■■□□□ 1.17
AC008878.3-201ENST00000617428 PCMTD1Q96MG8 357 aaPredicted RBP22.37■■□□□ 1.17
AC008878.3-201ENST00000617428 SRCIN1Q9C0H9 1055 aa22.37■■□□□ 1.17
AC008878.3-201ENST00000617428 DNMBPQ6XZF7 1577 aa22.36■■□□□ 1.17
AC008878.3-201ENST00000617428 NINLQ9Y2I6 1382 aa22.36■■□□□ 1.17
AC008878.3-201ENST00000617428 HECW1Q76N89 1606 aa22.35■■□□□ 1.17
AC008878.3-201ENST00000617428 IKQ13123 557 aaPredicted RBP22.35■■□□□ 1.17
AC008878.3-201ENST00000617428 ARHGEF11O15085 1522 aa22.35■■□□□ 1.17
AC008878.3-201ENST00000617428 SIL1Q9H173 461 aa22.35■■□□□ 1.17
AC008878.3-201ENST00000617428 NUCB2P80303 420 aa22.35■■□□□ 1.17
AC008878.3-201ENST00000617428 EPRSP07814 1512 aaKnown RBP22.34■■□□□ 1.17
AC008878.3-201ENST00000617428 KDM4AO75164 1064 aa22.34■■□□□ 1.17
AC008878.3-201ENST00000617428 ANKRD20A12PQ8NF67 263 aa22.33■■□□□ 1.17
AC008878.3-201ENST00000617428 PDE3AQ14432 1141 aa22.33■■□□□ 1.17
AC008878.3-201ENST00000617428 HOOK1Q9UJC3 728 aaKnown RBP22.33■■□□□ 1.17
AC008878.3-201ENST00000617428 PSMA5P28066 241 aa22.33■■□□□ 1.17
AC008878.3-201ENST00000617428 PDZRN3Q9UPQ7 1066 aa22.33■■□□□ 1.17
AC008878.3-201ENST00000617428 ERC1Q8IUD2 1116 aa22.32■■□□□ 1.16
AC008878.3-201ENST00000617428 CCAR2Q8N163 923 aaKnown RBP22.32■■□□□ 1.16
AC008878.3-201ENST00000617428 CCDC73Q6ZRK6 1079 aa22.32■■□□□ 1.16
AC008878.3-201ENST00000617428 CEBPAP49715 358 aaPredicted RBP22.32■■□□□ 1.16
AC008878.3-201ENST00000617428 CCT4P50991 539 aaKnown RBP22.32■■□□□ 1.16
AC008878.3-201ENST00000617428 SART3Q15020 963 aaKnown RBP22.32■■□□□ 1.16
AC008878.3-201ENST00000617428 CCDC158Q5M9N0 1113 aa22.32■■□□□ 1.16
AC008878.3-201ENST00000617428 RRP12Q5JTH9 1297 aaKnown RBP22.31■■□□□ 1.16
AC008878.3-201ENST00000617428 IPO7O95373 1038 aaKnown RBP22.31■■□□□ 1.16
AC008878.3-201ENST00000617428 FBXO31Q5XUX0 539 aaPredicted RBP22.3■■□□□ 1.16
AC008878.3-201ENST00000617428 WDR63Q8IWG1 891 aa22.3■■□□□ 1.16
AC008878.3-201ENST00000617428 BTBD11A6QL63 1104 aa22.3■■□□□ 1.16
AC008878.3-201ENST00000617428 FCHSD2O94868 740 aa22.3■■□□□ 1.16
AC008878.3-201ENST00000617428 NEK4P51957 841 aa22.29■■□□□ 1.16
AC008878.3-201ENST00000617428 MPHOSPH8Q99549 860 aa22.29■■□□□ 1.16
AC008878.3-201ENST00000617428 PLB1Q6P1J6 1458 aa22.29■■□□□ 1.16
AC008878.3-201ENST00000617428 TIAM1Q13009 1591 aa22.29■■□□□ 1.16
AC008878.3-201ENST00000617428 ATP2B1P20020 1258 aa22.29■■□□□ 1.16
AC008878.3-201ENST00000617428 GNL3LQ9NVN8 582 aaKnown RBP22.29■■□□□ 1.16
AC008878.3-201ENST00000617428 GSE1Q14687 1217 aa22.29■■□□□ 1.16
AC008878.3-201ENST00000617428 MAGI1Q96QZ7 1491 aaPredicted RBP22.29■■□□□ 1.16
AC008878.3-201ENST00000617428 ATF7IPQ6VMQ6 1270 aa22.29■■□□□ 1.16
AC008878.3-201ENST00000617428 GCC1Q96CN9 775 aa22.29■■□□□ 1.16
AC008878.3-201ENST00000617428 TTC39AQ5SRH9 613 aa22.28■■□□□ 1.16
AC008878.3-201ENST00000617428 XBP1P17861 261 aa22.28■■□□□ 1.16
AC008878.3-201ENST00000617428 FOXO3O43524 673 aa22.28■■□□□ 1.16
AC008878.3-201ENST00000617428 GOLGA6L1Q8N7Z2 621 aa22.28■■□□□ 1.16
AC008878.3-201ENST00000617428 KCNH5Q8NCM2 988 aa22.28■■□□□ 1.16
AC008878.3-201ENST00000617428 CCDC57Q2TAC2 916 aa22.27■■□□□ 1.16
AC008878.3-201ENST00000617428 BRMS1Q9HCU9 246 aa22.27■■□□□ 1.16
AC008878.3-201ENST00000617428 SASS6Q6UVJ0 657 aa22.26■■□□□ 1.15
AC008878.3-201ENST00000617428 CCDC141Q6ZP82 1450 aa22.26■■□□□ 1.15
AC008878.3-201ENST00000617428 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
AC008878.3-201ENST00000617428 HIP1O00291 1037 aa22.26■■□□□ 1.15
AC008878.3-201ENST00000617428 IDI1Q13907 227 aa22.26■■□□□ 1.15
AC008878.3-201ENST00000617428 DCAF8L1A6NGE4 600 aa22.25■■□□□ 1.15
AC008878.3-201ENST00000617428 PTCD1O75127 700 aaKnown RBP22.25■■□□□ 1.15
AC008878.3-201ENST00000617428 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.25■■□□□ 1.15
AC008878.3-201ENST00000617428 NAIPQ13075 1403 aa22.25■■□□□ 1.15
AC008878.3-201ENST00000617428 NSD3Q9BZ95 1437 aa22.25■■□□□ 1.15
AC008878.3-201ENST00000617428 LRRCC1Q9C099 1032 aa22.25■■□□□ 1.15
AC008878.3-201ENST00000617428 SRGAP3O43295 1099 aa22.24■■□□□ 1.15
AC008878.3-201ENST00000617428 THUMPD2Q9BTF0 503 aaKnown RBP22.24■■□□□ 1.15
AC008878.3-201ENST00000617428 MIS18AQ9NYP9 233 aa22.24■■□□□ 1.15
AC008878.3-201ENST00000617428 AMOTL2Q9Y2J4 779 aa22.24■■□□□ 1.15
AC008878.3-201ENST00000617428 SDF4Q9BRK5 362 aa22.24■■□□□ 1.15
AC008878.3-201ENST00000617428 SLC3A2P08195 630 aaKnown RBP22.23■■□□□ 1.15
AC008878.3-201ENST00000617428 NFE2L2Q16236 605 aa22.23■■□□□ 1.15
AC008878.3-201ENST00000617428 BICDL1Q6ZP65 573 aa22.23■■□□□ 1.15
AC008878.3-201ENST00000617428 CT47B1P0C2W7 299 aaPredicted RBP22.23■■□□□ 1.15
AC008878.3-201ENST00000617428 CCDC85AQ96PX6 553 aaPredicted RBP22.23■■□□□ 1.15
AC008878.3-201ENST00000617428 CCDC184Q52MB2 194 aa22.23■■□□□ 1.15
AC008878.3-201ENST00000617428 TMPOP42166 694 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms