RNA–Protein interactions for RNA: ENST00000616959.4

CPEB1-212, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 2 BASIC

Gene CPEB1, Length 2,009 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-212ENST00000616959 ZBED9Q6R2W3 1325 aa17.46■□□□□ 0.38
CPEB1-212ENST00000616959 POLR3AO14802 1390 aaPredicted RBP17.45■□□□□ 0.38
CPEB1-212ENST00000616959 TMEM94Q12767 1356 aa17.45■□□□□ 0.38
CPEB1-212ENST00000616959 SALL2Q9Y467 1007 aaPredicted RBP17.44■□□□□ 0.38
CPEB1-212ENST00000616959 ESCO1Q5FWF5 840 aa17.43■□□□□ 0.38
CPEB1-212ENST00000616959 BLMP54132 1417 aaPredicted RBP17.43■□□□□ 0.38
CPEB1-212ENST00000616959 COG3Q96JB2 828 aa17.43■□□□□ 0.38
CPEB1-212ENST00000616959 PHF8Q9UPP1 1060 aa17.43■□□□□ 0.38
CPEB1-212ENST00000616959 SSH2Q76I76 1423 aa17.42■□□□□ 0.38
CPEB1-212ENST00000616959 SHPRHQ149N8 1683 aa17.42■□□□□ 0.38
CPEB1-212ENST00000616959 CFAP53Q96M91 514 aa17.42■□□□□ 0.38
CPEB1-212ENST00000616959 ZNF335Q9H4Z2 1342 aaPredicted RBP17.41■□□□□ 0.38
CPEB1-212ENST00000616959 C19orf44Q9H6X5 657 aa17.41■□□□□ 0.38
CPEB1-212ENST00000616959 PPM1GO15355 546 aaPredicted RBP17.4■□□□□ 0.38
CPEB1-212ENST00000616959 CCDC146Q8IYE0 955 aa17.4■□□□□ 0.38
CPEB1-212ENST00000616959 ORAI2Q96SN7 254 aa17.4■□□□□ 0.38
CPEB1-212ENST00000616959 POLKQ9UBT6 870 aa17.39■□□□□ 0.37
CPEB1-212ENST00000616959 GTF3C3Q9Y5Q9 886 aa17.38■□□□□ 0.37
CPEB1-212ENST00000616959 PAK3O75914 559 aaPredicted RBP17.38■□□□□ 0.37
CPEB1-212ENST00000616959 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
CPEB1-212ENST00000616959 SCAF1Q9H7N4 1312 aaKnown RBP17.38■□□□□ 0.37
CPEB1-212ENST00000616959 MAP2P11137 1827 aaKnown RBP17.38■□□□□ 0.37
CPEB1-212ENST00000616959 INSRP06213 1382 aa17.38■□□□□ 0.37
CPEB1-212ENST00000616959 SOX12O15370 315 aa17.37■□□□□ 0.37
CPEB1-212ENST00000616959 RRS1Q15050 365 aaKnown RBP17.37■□□□□ 0.37
CPEB1-212ENST00000616959 NUTM2GQ5VZR2 741 aa17.37■□□□□ 0.37
CPEB1-212ENST00000616959 TTC21AQ8NDW8 1320 aa17.37■□□□□ 0.37
CPEB1-212ENST00000616959 OVOS2A0A0J9YW53 1432 aa17.37■□□□□ 0.37
CPEB1-212ENST00000616959 OVOS2Q6IE36 1432 aa17.37■□□□□ 0.37
CPEB1-212ENST00000616959 ATF3P18847 181 aa17.37■□□□□ 0.37
CPEB1-212ENST00000616959 COL3A1P02461 1466 aaPredicted RBP17.36■□□□□ 0.37
CPEB1-212ENST00000616959 PIK3C2AO00443 1686 aa17.36■□□□□ 0.37
CPEB1-212ENST00000616959 C1orf167Q5SNV9 1468 aa17.36■□□□□ 0.37
CPEB1-212ENST00000616959 XPCQ01831 940 aaPredicted RBP17.35■□□□□ 0.37
CPEB1-212ENST00000616959 XIRP1Q702N8 1843 aaKnown RBP17.35■□□□□ 0.37
CPEB1-212ENST00000616959 FOXO3O43524 673 aa17.35■□□□□ 0.37
CPEB1-212ENST00000616959 PSME1Q06323 249 aa17.35■□□□□ 0.37
CPEB1-212ENST00000616959 LRRC7Q96NW7 1537 aa17.33■□□□□ 0.37
CPEB1-212ENST00000616959 AATKQ6ZMQ8 1374 aa17.33■□□□□ 0.37
CPEB1-212ENST00000616959 U2SURPO15042 1029 aaKnown RBP17.33■□□□□ 0.37
CPEB1-212ENST00000616959 U2AF1L5P0DN76 240 aaPredicted RBP17.33■□□□□ 0.37
CPEB1-212ENST00000616959 U2AF1Q01081 240 aaKnown RBP eCLIP17.33■□□□□ 0.37
CPEB1-212ENST00000616959 MST1RQ04912 1400 aa17.33■□□□□ 0.36
CPEB1-212ENST00000616959 NCOA3Q9Y6Q9 1424 aa17.33■□□□□ 0.36
CPEB1-212ENST00000616959 MSH6P52701 1360 aa17.33■□□□□ 0.36
CPEB1-212ENST00000616959 PNPLA6Q8IY17 1366 aa17.33■□□□□ 0.36
CPEB1-212ENST00000616959 NLRP6P59044 892 aa17.33■□□□□ 0.36
CPEB1-212ENST00000616959 ABTB2Q8N961 1025 aa17.33■□□□□ 0.36
CPEB1-212ENST00000616959 APAF1O14727 1248 aa17.31■□□□□ 0.36
CPEB1-212ENST00000616959 DIAPH1O60610 1272 aaKnown RBP17.31■□□□□ 0.36
CPEB1-212ENST00000616959 PELP1Q8IZL8 1130 aaKnown RBP17.31■□□□□ 0.36
CPEB1-212ENST00000616959 DCCP43146 1447 aa17.31■□□□□ 0.36
CPEB1-212ENST00000616959 SMG6Q86US8 1419 aaKnown RBP17.31■□□□□ 0.36
CPEB1-212ENST00000616959 USP31Q70CQ4 1352 aa17.31■□□□□ 0.36
CPEB1-212ENST00000616959 CADPS2Q86UW7 1296 aa17.3■□□□□ 0.36
CPEB1-212ENST00000616959 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
CPEB1-212ENST00000616959 CDK12Q9NYV4 1490 aaPredicted RBP17.29■□□□□ 0.36
CPEB1-212ENST00000616959 DDX17Q92841 729 aaKnown RBP17.29■□□□□ 0.36
CPEB1-212ENST00000616959 DMRT2Q9Y5R5 561 aa17.29■□□□□ 0.36
CPEB1-212ENST00000616959 MARF1Q9Y4F3 1742 aaKnown RBP17.29■□□□□ 0.36
CPEB1-212ENST00000616959 PLEKHG5O94827 1062 aa17.28■□□□□ 0.36
CPEB1-212ENST00000616959 CDCA7LQ96GN5 454 aa17.28■□□□□ 0.36
CPEB1-212ENST00000616959 KIF1AQ12756 1690 aa17.27■□□□□ 0.36
CPEB1-212ENST00000616959 PEAK1Q9H792 1746 aa17.27■□□□□ 0.35
CPEB1-212ENST00000616959 KRT28Q7Z3Y7 464 aa17.26■□□□□ 0.35
CPEB1-212ENST00000616959 RUNDC1Q96C34 613 aa17.26■□□□□ 0.35
CPEB1-212ENST00000616959 MAP3K19Q56UN5 1328 aa17.26■□□□□ 0.35
CPEB1-212ENST00000616959 LMOD2Q6P5Q4 547 aa17.26■□□□□ 0.35
CPEB1-212ENST00000616959 RRP7AQ9Y3A4 280 aaKnown RBP17.26■□□□□ 0.35
CPEB1-212ENST00000616959 NEUROD2Q15784 382 aa17.25■□□□□ 0.35
CPEB1-212ENST00000616959 IL13P35225 146 aa17.25■□□□□ 0.35
CPEB1-212ENST00000616959 HSP90AB2PQ58FF8 381 aa17.24■□□□□ 0.35
CPEB1-212ENST00000616959 TCP11L2Q8N4U5 519 aa17.24■□□□□ 0.35
CPEB1-212ENST00000616959 SUPT16HQ9Y5B9 1047 aaKnown RBP17.24■□□□□ 0.35
CPEB1-212ENST00000616959 USP54Q70EL1 1684 aa17.23■□□□□ 0.35
CPEB1-212ENST00000616959 TRPM3Q9HCF6 1732 aaPredicted RBP17.23■□□□□ 0.35
CPEB1-212ENST00000616959 IQSEC2Q5JU85 1478 aa17.23■□□□□ 0.35
CPEB1-212ENST00000616959 HMOX1P09601 288 aa17.23■□□□□ 0.35
CPEB1-212ENST00000616959 PLEKHF1Q96S99 279 aa17.22■□□□□ 0.35
CPEB1-212ENST00000616959 ZNF521Q96K83 1311 aa17.22■□□□□ 0.35
CPEB1-212ENST00000616959 AMPHP49418 695 aa17.21■□□□□ 0.35
CPEB1-212ENST00000616959 EIF4A2Q14240 407 aaKnown RBP17.21■□□□□ 0.35
CPEB1-212ENST00000616959 PDE3BQ13370 1112 aa17.21■□□□□ 0.35
CPEB1-212ENST00000616959 BRINP3Q76B58 766 aa17.2■□□□□ 0.34
CPEB1-212ENST00000616959 SLAIN2Q9P270 581 aa17.2■□□□□ 0.34
CPEB1-212ENST00000616959 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
CPEB1-212ENST00000616959 RSPH6AQ9H0K4 717 aa17.2■□□□□ 0.34
CPEB1-212ENST00000616959 ZBTB7CA1YPR0 619 aa17.19■□□□□ 0.34
CPEB1-212ENST00000616959 PRKAR2BP31323 418 aa17.19■□□□□ 0.34
CPEB1-212ENST00000616959 MAPK8IP3Q9UPT6 1336 aa17.19■□□□□ 0.34
CPEB1-212ENST00000616959 FLT4P35916 1363 aa17.19■□□□□ 0.34
CPEB1-212ENST00000616959 NPHP3Q7Z494 1330 aa17.18■□□□□ 0.34
CPEB1-212ENST00000616959 NFAT5O94916 1531 aa17.18■□□□□ 0.34
CPEB1-212ENST00000616959 FCHSD2O94868 740 aa17.18■□□□□ 0.34
CPEB1-212ENST00000616959 GOLGA2Q08379 1002 aa17.18■□□□□ 0.34
CPEB1-212ENST00000616959 WWC1Q8IX03 1113 aa17.17■□□□□ 0.34
CPEB1-212ENST00000616959 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
CPEB1-212ENST00000616959 HOXC9P31274 260 aa17.16■□□□□ 0.34
CPEB1-212ENST00000616959 AEBP1Q8IUX7 1158 aa17.16■□□□□ 0.34
CPEB1-212ENST00000616959 LTN1O94822 1766 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms