RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 ARHGAP31Q2M1Z3 1444 aa19.57■□□□□ 0.72
GPN1-212ENST00000616939 TRIM27P14373 513 aa19.56■□□□□ 0.72
GPN1-212ENST00000616939 ATF7IPQ6VMQ6 1270 aa19.56■□□□□ 0.72
GPN1-212ENST00000616939 GBP4Q96PP9 640 aa19.56■□□□□ 0.72
GPN1-212ENST00000616939 CD109Q6YHK3 1445 aa19.56■□□□□ 0.72
GPN1-212ENST00000616939 RPGRIP1LQ68CZ1 1315 aa19.56■□□□□ 0.72
GPN1-212ENST00000616939 ESPNB1AK53 854 aa19.55■□□□□ 0.72
GPN1-212ENST00000616939 GZF1Q9H116 711 aaPredicted RBP19.55■□□□□ 0.72
GPN1-212ENST00000616939 SLC12A5Q9H2X9 1139 aa19.55■□□□□ 0.72
GPN1-212ENST00000616939 SMC4Q9NTJ3 1288 aa19.55■□□□□ 0.72
GPN1-212ENST00000616939 CDC42BPGQ6DT37 1551 aa19.55■□□□□ 0.72
GPN1-212ENST00000616939 KIF3BO15066 747 aa19.55■□□□□ 0.72
GPN1-212ENST00000616939 HSP90AA1P07900 732 aaKnown RBP19.55■□□□□ 0.72
GPN1-212ENST00000616939 RAB3GAP1Q15042 981 aa19.55■□□□□ 0.72
GPN1-212ENST00000616939 PIK3C2BO00750 1634 aa19.54■□□□□ 0.72
GPN1-212ENST00000616939 NUCB1Q02818 461 aa19.54■□□□□ 0.72
GPN1-212ENST00000616939 SPRYD3Q8NCJ5 442 aa19.54■□□□□ 0.72
GPN1-212ENST00000616939 ZBTB40Q9NUA8 1239 aa19.53■□□□□ 0.72
GPN1-212ENST00000616939 IBTKQ9P2D0 1353 aaPredicted RBP19.53■□□□□ 0.72
GPN1-212ENST00000616939 HECW2Q9P2P5 1572 aa19.52■□□□□ 0.72
GPN1-212ENST00000616939 EXOSC9Q06265 439 aaKnown RBP19.52■□□□□ 0.72
GPN1-212ENST00000616939 SSH1Q8WYL5 1049 aa19.52■□□□□ 0.72
GPN1-212ENST00000616939 PLEKHF1Q96S99 279 aa19.52■□□□□ 0.72
GPN1-212ENST00000616939 CLTCQ00610 1675 aaKnown RBP19.52■□□□□ 0.71
GPN1-212ENST00000616939 IPO8O15397 1037 aaKnown RBP19.51■□□□□ 0.71
GPN1-212ENST00000616939 U2AF1L5P0DN76 240 aaPredicted RBP19.51■□□□□ 0.71
GPN1-212ENST00000616939 U2AF1Q01081 240 aaKnown RBP eCLIP19.51■□□□□ 0.71
GPN1-212ENST00000616939 BMP2KLQ5H9B9 411 aa19.51■□□□□ 0.71
GPN1-212ENST00000616939 CLEC17AQ6ZS10 378 aa19.51■□□□□ 0.71
GPN1-212ENST00000616939 TNPO1Q92973 898 aaKnown RBP19.51■□□□□ 0.71
GPN1-212ENST00000616939 BRPF1P55201 1214 aaPredicted RBP19.51■□□□□ 0.71
GPN1-212ENST00000616939 ALDH1L2Q3SY69 923 aa19.51■□□□□ 0.71
GPN1-212ENST00000616939 ITPRIPQ8IWB1 547 aa19.51■□□□□ 0.71
GPN1-212ENST00000616939 CAMSAP1Q5T5Y3 1602 aa19.5■□□□□ 0.71
GPN1-212ENST00000616939 EVC2Q86UK5 1308 aa19.5■□□□□ 0.71
GPN1-212ENST00000616939 TPM2P07951 284 aa19.5■□□□□ 0.71
GPN1-212ENST00000616939 TMPOP42166 694 aaKnown RBP19.5■□□□□ 0.71
GPN1-212ENST00000616939 TNNT2P45379 298 aaPredicted RBP19.5■□□□□ 0.71
GPN1-212ENST00000616939 PPIP5K1Q6PFW1 1433 aa19.5■□□□□ 0.71
GPN1-212ENST00000616939 TRIM35Q9UPQ4 493 aa19.49■□□□□ 0.71
GPN1-212ENST00000616939 ZNF428Q96B54 188 aa19.48■□□□□ 0.71
GPN1-212ENST00000616939 CHMP4BQ9H444 224 aaKnown RBP19.48■□□□□ 0.71
GPN1-212ENST00000616939 PIK3R4Q99570 1358 aa19.48■□□□□ 0.71
GPN1-212ENST00000616939 HSP90AA2PQ14568 343 aaPredicted RBP19.48■□□□□ 0.71
GPN1-212ENST00000616939 TMEM57Q8N5G2 664 aa19.48■□□□□ 0.71
GPN1-212ENST00000616939 TRAK1Q9UPV9 953 aa19.48■□□□□ 0.71
GPN1-212ENST00000616939 HSP90AB1P08238 724 aaKnown RBP19.47■□□□□ 0.71
GPN1-212ENST00000616939 TSR2Q969E8 191 aaKnown RBP19.47■□□□□ 0.71
GPN1-212ENST00000616939 ARXQ96QS3 562 aa19.47■□□□□ 0.71
GPN1-212ENST00000616939 KIF20BQ96Q89 1820 aa19.47■□□□□ 0.71
GPN1-212ENST00000616939 CHD1LQ86WJ1 897 aa19.46■□□□□ 0.71
GPN1-212ENST00000616939 PPP1R9BQ96SB3 815 aa19.46■□□□□ 0.71
GPN1-212ENST00000616939 NOB1Q9ULX3 412 aaKnown RBP19.46■□□□□ 0.71
GPN1-212ENST00000616939 ERBB4Q15303 1308 aa19.46■□□□□ 0.71
GPN1-212ENST00000616939 FRMPD1Q5SYB0 1578 aa19.46■□□□□ 0.71
GPN1-212ENST00000616939 CCDC173Q0VFZ6 552 aa19.46■□□□□ 0.71
GPN1-212ENST00000616939 TRIM44Q96DX7 344 aaPredicted RBP19.46■□□□□ 0.71
GPN1-212ENST00000616939 NEXMIFQ5QGS0 1516 aa19.46■□□□□ 0.71
GPN1-212ENST00000616939 NPATQ14207 1427 aa19.45■□□□□ 0.7
GPN1-212ENST00000616939 GCC1Q96CN9 775 aa19.45■□□□□ 0.7
GPN1-212ENST00000616939 PTCH1Q13635 1447 aa19.45■□□□□ 0.7
GPN1-212ENST00000616939 KIF2CQ99661 725 aa19.44■□□□□ 0.7
GPN1-212ENST00000616939 ZFYVE9O95405 1425 aa19.43■□□□□ 0.7
GPN1-212ENST00000616939 K7ELQ4 463 aaPredicted RBP19.43■□□□□ 0.7
GPN1-212ENST00000616939 GAS2L3Q86XJ1 694 aa19.43■□□□□ 0.7
GPN1-212ENST00000616939 CFAP44Q96MT7 982 aa19.42■□□□□ 0.7
GPN1-212ENST00000616939 PNPLA6Q8IY17 1366 aa19.42■□□□□ 0.7
GPN1-212ENST00000616939 ABCC3O15438 1527 aa19.41■□□□□ 0.7
GPN1-212ENST00000616939 GOLGA6L22H0YM25 854 aa19.41■□□□□ 0.7
GPN1-212ENST00000616939 A0A1W2PP64 1363 aa19.4■□□□□ 0.7
GPN1-212ENST00000616939 TERF1P54274 439 aa19.4■□□□□ 0.7
GPN1-212ENST00000616939 ARHGAP45Q92619 1136 aa19.4■□□□□ 0.7
GPN1-212ENST00000616939 LRRC7Q96NW7 1537 aa19.4■□□□□ 0.7
GPN1-212ENST00000616939 KLHL40Q2TBA0 621 aa19.39■□□□□ 0.7
GPN1-212ENST00000616939 SIGLEC1Q9BZZ2 1709 aa19.39■□□□□ 0.69
GPN1-212ENST00000616939 LNPKQ9C0E8 428 aa19.39■□□□□ 0.69
GPN1-212ENST00000616939 CFAP65Q6ZU64 1925 aaKnown RBP19.38■□□□□ 0.69
GPN1-212ENST00000616939 ATAD2Q6PL18 1390 aa19.38■□□□□ 0.69
GPN1-212ENST00000616939 HS1BP3Q53T59 392 aa19.37■□□□□ 0.69
GPN1-212ENST00000616939 FAM135BQ49AJ0 1406 aa19.37■□□□□ 0.69
GPN1-212ENST00000616939 ASXL2Q76L83 1435 aa19.37■□□□□ 0.69
GPN1-212ENST00000616939 KIF24Q5T7B8 1368 aa19.36■□□□□ 0.69
GPN1-212ENST00000616939 ZNF445P59923 1031 aa19.36■□□□□ 0.69
GPN1-212ENST00000616939 ZSCAN30Q86W11 494 aa19.36■□□□□ 0.69
GPN1-212ENST00000616939 MLH3Q9UHC1 1453 aa19.36■□□□□ 0.69
GPN1-212ENST00000616939 YEATS2Q9ULM3 1422 aa19.35■□□□□ 0.69
GPN1-212ENST00000616939 RIPK4P57078 832 aa19.35■□□□□ 0.69
GPN1-212ENST00000616939 TBC1D9Q6ZT07 1266 aa19.35■□□□□ 0.69
GPN1-212ENST00000616939 CD163L1Q9NR16 1453 aa19.35■□□□□ 0.69
GPN1-212ENST00000616939 U2SURPO15042 1029 aaKnown RBP19.35■□□□□ 0.69
GPN1-212ENST00000616939 CDC45O75419 566 aa19.35■□□□□ 0.69
GPN1-212ENST00000616939 TMEM132EQ6IEE7 984 aa19.35■□□□□ 0.69
GPN1-212ENST00000616939 PKNOX2Q96KN3 472 aa19.35■□□□□ 0.69
GPN1-212ENST00000616939 ZBTB7BO15156 539 aaPredicted RBP19.34■□□□□ 0.69
GPN1-212ENST00000616939 NASPP49321 788 aaPredicted RBP19.34■□□□□ 0.69
GPN1-212ENST00000616939 OFD1O75665 1012 aa19.33■□□□□ 0.69
GPN1-212ENST00000616939 RABEP1Q15276 862 aa19.33■□□□□ 0.69
GPN1-212ENST00000616939 ANP32BQ92688 251 aaKnown RBP19.33■□□□□ 0.69
GPN1-212ENST00000616939 ABCC4O15439 1325 aa19.33■□□□□ 0.68
GPN1-212ENST00000616939 CD2BP2O95400 341 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms