RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 KRT27Q7Z3Y8 459 aa21.44■■□□□ 1.02
UBXN1-218ENST00000616865 MINK1Q8N4C8 1332 aaPredicted RBP21.44■■□□□ 1.02
UBXN1-218ENST00000616865 ATP7BP35670 1465 aa21.41■■□□□ 1.02
UBXN1-218ENST00000616865 WASLO00401 505 aaPredicted RBP21.41■■□□□ 1.02
UBXN1-218ENST00000616865 BTG4Q9NY30 223 aa21.41■■□□□ 1.02
UBXN1-218ENST00000616865 THSD7AQ9UPZ6 1657 aa21.4■■□□□ 1.02
UBXN1-218ENST00000616865 LRP5O75197 1615 aa21.4■■□□□ 1.02
UBXN1-218ENST00000616865 PHRF1Q9P1Y6 1649 aaKnown RBP21.4■■□□□ 1.02
UBXN1-218ENST00000616865 DCAF11Q8TEB1 546 aa21.4■■□□□ 1.02
UBXN1-218ENST00000616865 KDM2AQ9Y2K7 1162 aa21.4■■□□□ 1.02
UBXN1-218ENST00000616865 RGPD1P0DJD0 1748 aa21.4■■□□□ 1.02
UBXN1-218ENST00000616865 A0A0G2JS52 829 aa21.39■■□□□ 1.01
UBXN1-218ENST00000616865 MYT1Q01538 1121 aa21.39■■□□□ 1.01
UBXN1-218ENST00000616865 CLSPNQ9HAW4 1339 aa21.38■■□□□ 1.01
UBXN1-218ENST00000616865 FAM98CQ17RN3 349 aaKnown RBP21.38■■□□□ 1.01
UBXN1-218ENST00000616865 STAC3Q96MF2 364 aa21.38■■□□□ 1.01
UBXN1-218ENST00000616865 TOPAZ1Q8N9V7 1692 aa21.37■■□□□ 1.01
UBXN1-218ENST00000616865 NEUROD1Q13562 356 aa21.37■■□□□ 1.01
UBXN1-218ENST00000616865 NGDNQ8NEJ9 315 aaKnown RBP21.36■■□□□ 1.01
UBXN1-218ENST00000616865 TNS1Q9HBL0 1735 aaKnown RBP21.35■■□□□ 1.01
UBXN1-218ENST00000616865 SPATA31A5Q5VU36 1347 aa21.34■■□□□ 1.01
UBXN1-218ENST00000616865 SPATA31A7Q8IWB4 1347 aa21.34■■□□□ 1.01
UBXN1-218ENST00000616865 SIN3AQ96ST3 1273 aa21.34■■□□□ 1.01
UBXN1-218ENST00000616865 KIAA1210Q9ULL0 1709 aa21.34■■□□□ 1.01
UBXN1-218ENST00000616865 PAK3O75914 559 aaPredicted RBP21.33■■□□□ 1.01
UBXN1-218ENST00000616865 BAG6P46379 1132 aa21.33■■□□□ 1.01
UBXN1-218ENST00000616865 PRDM11Q9NQV5 511 aa21.32■■□□□ 1
UBXN1-218ENST00000616865 NUDT16Q96DE0 195 aaKnown RBP21.3■■□□□ 1
UBXN1-218ENST00000616865 KIAA0232Q92628 1395 aa21.3■■□□□ 1
UBXN1-218ENST00000616865 NRKQ7Z2Y5 1582 aa21.3■■□□□ 1
UBXN1-218ENST00000616865 POLR3AO14802 1390 aaPredicted RBP21.28■■□□□ 1
UBXN1-218ENST00000616865 DISP2A7MBM2 1401 aa21.28■■□□□ 1
UBXN1-218ENST00000616865 FAM182BQ5T319 152 aa21.26■□□□□ 0.99
UBXN1-218ENST00000616865 SPATA31A1Q5TZJ5 1347 aa21.26■□□□□ 0.99
UBXN1-218ENST00000616865 PSDA5PKW4 1024 aaPredicted RBP21.25■□□□□ 0.99
UBXN1-218ENST00000616865 CDK19Q9BWU1 502 aa21.25■□□□□ 0.99
UBXN1-218ENST00000616865 TONSLQ96HA7 1378 aa21.24■□□□□ 0.99
UBXN1-218ENST00000616865 EN1Q05925 392 aaPredicted RBP21.24■□□□□ 0.99
UBXN1-218ENST00000616865 CHRNA2Q15822 529 aa21.24■□□□□ 0.99
UBXN1-218ENST00000616865 LMO7Q8WWI1 1683 aa21.24■□□□□ 0.99
UBXN1-218ENST00000616865 ACEP12821 1306 aa21.23■□□□□ 0.99
UBXN1-218ENST00000616865 SSH2Q76I76 1423 aa21.21■□□□□ 0.99
UBXN1-218ENST00000616865 NUTM2GQ5VZR2 741 aa21.21■□□□□ 0.99
UBXN1-218ENST00000616865 STRN4Q9NRL3 753 aa21.21■□□□□ 0.99
UBXN1-218ENST00000616865 CCDC61Q9Y6R9 512 aa21.21■□□□□ 0.99
UBXN1-218ENST00000616865 ZC3H6P61129 1189 aaKnown RBP21.2■□□□□ 0.98
UBXN1-218ENST00000616865 RREB1Q92766 1687 aa21.19■□□□□ 0.98
UBXN1-218ENST00000616865 CAMTA1Q9Y6Y1 1673 aa21.19■□□□□ 0.98
UBXN1-218ENST00000616865 PLEKHG3A1L390 1219 aa21.19■□□□□ 0.98
UBXN1-218ENST00000616865 NBPF8Q3BBV2 869 aa21.19■□□□□ 0.98
UBXN1-218ENST00000616865 QRICH2Q9H0J4 1663 aa21.18■□□□□ 0.98
UBXN1-218ENST00000616865 USP19O94966 1318 aa21.18■□□□□ 0.98
UBXN1-218ENST00000616865 CPDO75976 1380 aa21.18■□□□□ 0.98
UBXN1-218ENST00000616865 FAM196AQ6ZSG2 479 aa21.17■□□□□ 0.98
UBXN1-218ENST00000616865 PARP4Q9UKK3 1724 aaKnown RBP21.16■□□□□ 0.98
UBXN1-218ENST00000616865 PPIP5K1Q6PFW1 1433 aa21.16■□□□□ 0.98
UBXN1-218ENST00000616865 EZH2Q15910 746 aaKnown RBP21.16■□□□□ 0.98
UBXN1-218ENST00000616865 BARGINQ6ZT62 677 aa21.16■□□□□ 0.98
UBXN1-218ENST00000616865 ABTB2Q8N961 1025 aa21.16■□□□□ 0.98
UBXN1-218ENST00000616865 L3MBTL2Q969R5 705 aa21.16■□□□□ 0.98
UBXN1-218ENST00000616865 USP35Q9P2H5 1018 aa21.16■□□□□ 0.98
UBXN1-218ENST00000616865 TRIM37O94972 964 aa21.15■□□□□ 0.98
UBXN1-218ENST00000616865 R3HDM1Q15032 1099 aaKnown RBP21.15■□□□□ 0.98
UBXN1-218ENST00000616865 NBPF1Q3BBV0 1214 aa21.15■□□□□ 0.98
UBXN1-218ENST00000616865 TIMELESSQ9UNS1 1208 aa21.15■□□□□ 0.98
UBXN1-218ENST00000616865 NUP188Q5SRE5 1749 aa21.15■□□□□ 0.98
UBXN1-218ENST00000616865 PARD3Q8TEW0 1356 aa21.14■□□□□ 0.98
UBXN1-218ENST00000616865 EVA1CP58658 441 aa21.13■□□□□ 0.97
UBXN1-218ENST00000616865 CAMKK2Q96RR4 588 aa21.13■□□□□ 0.97
UBXN1-218ENST00000616865 COL5A2P05997 1499 aaPredicted RBP21.13■□□□□ 0.97
UBXN1-218ENST00000616865 CENPJQ9HC77 1338 aaPredicted RBP21.12■□□□□ 0.97
UBXN1-218ENST00000616865 SRPK2P78362 688 aaKnown RBP21.12■□□□□ 0.97
UBXN1-218ENST00000616865 LARP1Q6PKG0 1096 aaKnown RBP21.12■□□□□ 0.97
UBXN1-218ENST00000616865 BRD4O60885 1362 aaPredicted RBP21.11■□□□□ 0.97
UBXN1-218ENST00000616865 SLIT3O75094 1523 aa21.1■□□□□ 0.97
UBXN1-218ENST00000616865 PDE3BQ13370 1112 aa21.1■□□□□ 0.97
UBXN1-218ENST00000616865 NLRP13Q86W25 1043 aa21.1■□□□□ 0.97
UBXN1-218ENST00000616865 TCP11L2Q8N4U5 519 aa21.1■□□□□ 0.97
UBXN1-218ENST00000616865 APBA3O96018 575 aa21.09■□□□□ 0.97
UBXN1-218ENST00000616865 USP6P35125 1406 aa21.09■□□□□ 0.97
UBXN1-218ENST00000616865 PIK3C2AO00443 1686 aa21.09■□□□□ 0.97
UBXN1-218ENST00000616865 LRRC37A3O60309 1634 aa21.08■□□□□ 0.97
UBXN1-218ENST00000616865 GCP02774 474 aa21.08■□□□□ 0.97
UBXN1-218ENST00000616865 CABP2Q9NPB3 220 aa21.08■□□□□ 0.97
UBXN1-218ENST00000616865 THRAP3Q9Y2W1 955 aaKnown RBP21.08■□□□□ 0.97
UBXN1-218ENST00000616865 WNK3Q9BYP7 1800 aa21.08■□□□□ 0.96
UBXN1-218ENST00000616865 PEAK1Q9H792 1746 aa21.07■□□□□ 0.96
UBXN1-218ENST00000616865 CRB1P82279 1406 aa21.07■□□□□ 0.96
UBXN1-218ENST00000616865 TRPM1Q7Z4N2 1603 aa21.07■□□□□ 0.96
UBXN1-218ENST00000616865 ZEB1P37275 1124 aaPredicted RBP21.06■□□□□ 0.96
UBXN1-218ENST00000616865 RGPD3A6NKT7 1758 aaPredicted RBP21.05■□□□□ 0.96
UBXN1-218ENST00000616865 RGPD4Q7Z3J3 1758 aa21.05■□□□□ 0.96
UBXN1-218ENST00000616865 COL18A1P39060 1754 aa21.04■□□□□ 0.96
UBXN1-218ENST00000616865 SBF2Q86WG5 1849 aa21.04■□□□□ 0.96
UBXN1-218ENST00000616865 AATKQ6ZMQ8 1374 aa21.03■□□□□ 0.96
UBXN1-218ENST00000616865 OVOS2A0A0G2JMS6 1433 aa21.03■□□□□ 0.96
UBXN1-218ENST00000616865 OVOS2A0A0J9YW53 1432 aa21.03■□□□□ 0.96
UBXN1-218ENST00000616865 OVOS2Q6IE36 1432 aa21.03■□□□□ 0.96
UBXN1-218ENST00000616865 AKAP12Q02952 1782 aa21.02■□□□□ 0.96
UBXN1-218ENST00000616865 CABP1Q9NZU7 370 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms