RNA–Protein interactions for RNA: ENST00000616856.1

TULP4-206, Transcript of tubby like protein 4, humanhuman

TSL 2

Gene TULP4, Length 2,307 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-206ENST00000616856 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.1■□□□□ 0.174e-7■■■■□ 19.8
TULP4-206ENST00000616856 GGNBP2Q9H3C7 697 aa16.1■□□□□ 0.17
TULP4-206ENST00000616856 SPINK5Q9NQ38 1064 aaPredicted RBP16.1■□□□□ 0.17
TULP4-206ENST00000616856 APAF1O14727 1248 aa16.09■□□□□ 0.17
TULP4-206ENST00000616856 CRBNQ96SW2 442 aa16.09■□□□□ 0.17
TULP4-206ENST00000616856 NSD2O96028 1365 aa16.08■□□□□ 0.17
TULP4-206ENST00000616856 CDC42BPGQ6DT37 1551 aa16.08■□□□□ 0.16
TULP4-206ENST00000616856 LMTK3Q96Q04 1460 aa16.08■□□□□ 0.16
TULP4-206ENST00000616856 CPSF1Q10570 1443 aaKnown RBP16.07■□□□□ 0.16
TULP4-206ENST00000616856 FYB1O15117 783 aa16.07■□□□□ 0.16
TULP4-206ENST00000616856 DMRT2Q9Y5R5 561 aa16.07■□□□□ 0.16
TULP4-206ENST00000616856 GOLGA2Q08379 1002 aa16.07■□□□□ 0.16
TULP4-206ENST00000616856 NALCNQ8IZF0 1738 aa16.07■□□□□ 0.16
TULP4-206ENST00000616856 TOPAZ1Q8N9V7 1692 aa16.06■□□□□ 0.16
TULP4-206ENST00000616856 SKAP1Q86WV1 359 aa16.06■□□□□ 0.16
TULP4-206ENST00000616856 ITSN1Q15811 1721 aa16.06■□□□□ 0.16
TULP4-206ENST00000616856 TCERG1O14776 1098 aaKnown RBP16.06■□□□□ 0.16
TULP4-206ENST00000616856 RGPD8O14715 1765 aaPredicted RBP16.06■□□□□ 0.16
TULP4-206ENST00000616856 C14orf37Q86TY3 774 aa16.05■□□□□ 0.16
TULP4-206ENST00000616856 PMFBP1Q8TBY8 1022 aa16.05■□□□□ 0.16
TULP4-206ENST00000616856 NKTRP30414 1462 aaKnown RBP16.05■□□□□ 0.16
TULP4-206ENST00000616856 KIF20BQ96Q89 1820 aa16.05■□□□□ 0.16
TULP4-206ENST00000616856 ACEP12821 1306 aa16.05■□□□□ 0.16
TULP4-206ENST00000616856 SLFN5Q08AF3 891 aa16.05■□□□□ 0.16
TULP4-206ENST00000616856 EDC4Q6P2E9 1401 aaKnown RBP16.04■□□□□ 0.16
TULP4-206ENST00000616856 AKAP12Q02952 1782 aa16.04■□□□□ 0.16
TULP4-206ENST00000616856 NWD1Q149M9 1564 aa16.03■□□□□ 0.16
TULP4-206ENST00000616856 MON2Q7Z3U7 1717 aa16.03■□□□□ 0.16
TULP4-206ENST00000616856 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
TULP4-206ENST00000616856 SHPRHQ149N8 1683 aa16.03■□□□□ 0.16
TULP4-206ENST00000616856 ANP32AP39687 249 aaKnown RBP16.03■□□□□ 0.16
TULP4-206ENST00000616856 ANKRD26Q9UPS8 1709 aa16.03■□□□□ 0.16
TULP4-206ENST00000616856 PLEKHG3A1L390 1219 aa16.02■□□□□ 0.16
TULP4-206ENST00000616856 NME9Q86XW9 330 aa16.02■□□□□ 0.16
TULP4-206ENST00000616856 ZNF692Q9BU19 519 aaPredicted RBP16.02■□□□□ 0.16
TULP4-206ENST00000616856 POLR3AO14802 1390 aaPredicted RBP16.02■□□□□ 0.16
TULP4-206ENST00000616856 FMN2Q9NZ56 1722 aa16.02■□□□□ 0.16
TULP4-206ENST00000616856 PROSER2Q86WR7 435 aaPredicted RBP16.02■□□□□ 0.15
TULP4-206ENST00000616856 TRMT2AQ8IZ69 625 aaKnown RBP16.02■□□□□ 0.15
TULP4-206ENST00000616856 ADGRL3Q9HAR2 1447 aa16.02■□□□□ 0.15
TULP4-206ENST00000616856 MS4A1P11836 297 aa16.01■□□□□ 0.15
TULP4-206ENST00000616856 MTHFSP49914 203 aa16.01■□□□□ 0.15
TULP4-206ENST00000616856 NGDNQ8NEJ9 315 aaKnown RBP16■□□□□ 0.15
TULP4-206ENST00000616856 ZRANB1Q9UGI0 708 aa16■□□□□ 0.15
TULP4-206ENST00000616856 GOLGA6L2Q8N9W4 650 aaPredicted RBP16■□□□□ 0.15
TULP4-206ENST00000616856 ANKARQ7Z5J8 1434 aa16■□□□□ 0.15
TULP4-206ENST00000616856 STRCQ7RTU9 1775 aa15.99■□□□□ 0.15
TULP4-206ENST00000616856 NOP58Q9Y2X3 529 aaKnown RBP15.99■□□□□ 0.15
TULP4-206ENST00000616856 USP6P35125 1406 aa15.99■□□□□ 0.15
TULP4-206ENST00000616856 STRCP1A6NGW2 1772 aa15.98■□□□□ 0.15
TULP4-206ENST00000616856 FBLN1P23142 703 aa15.98■□□□□ 0.15
TULP4-206ENST00000616856 RRP7AQ9Y3A4 280 aaKnown RBP15.97■□□□□ 0.15
TULP4-206ENST00000616856 TTC21BQ7Z4L5 1316 aa15.97■□□□□ 0.15
TULP4-206ENST00000616856 BCAR3O75815 825 aa15.97■□□□□ 0.15
TULP4-206ENST00000616856 IPO9Q96P70 1041 aaKnown RBP15.97■□□□□ 0.15
TULP4-206ENST00000616856 NRKQ7Z2Y5 1582 aa15.97■□□□□ 0.15
TULP4-206ENST00000616856 NEUROD2Q15784 382 aa15.96■□□□□ 0.15
TULP4-206ENST00000616856 COG3Q96JB2 828 aa15.96■□□□□ 0.15
TULP4-206ENST00000616856 CFAP53Q96M91 514 aa15.96■□□□□ 0.15
TULP4-206ENST00000616856 PAK3O75914 559 aaPredicted RBP15.95■□□□□ 0.14
TULP4-206ENST00000616856 WWC1Q8IX03 1113 aa15.95■□□□□ 0.14
TULP4-206ENST00000616856 TMEM94Q12767 1356 aa15.95■□□□□ 0.14
TULP4-206ENST00000616856 E9PSI1 815 aa15.94■□□□□ 0.14
TULP4-206ENST00000616856 ESCO1Q5FWF5 840 aa15.94■□□□□ 0.14
TULP4-206ENST00000616856 IQSEC2Q5JU85 1478 aa15.94■□□□□ 0.14
TULP4-206ENST00000616856 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
TULP4-206ENST00000616856 PPM1GO15355 546 aaPredicted RBP15.94■□□□□ 0.14
TULP4-206ENST00000616856 PHF8Q9UPP1 1060 aa15.94■□□□□ 0.14
TULP4-206ENST00000616856 SSH2Q76I76 1423 aa15.92■□□□□ 0.14
TULP4-206ENST00000616856 PDE4AP27815 886 aa15.92■□□□□ 0.14
TULP4-206ENST00000616856 TCP11L2Q8N4U5 519 aa15.92■□□□□ 0.14
TULP4-206ENST00000616856 C19orf44Q9H6X5 657 aa15.92■□□□□ 0.14
TULP4-206ENST00000616856 MAP2P11137 1827 aaKnown RBP15.91■□□□□ 0.14
TULP4-206ENST00000616856 ORAI2Q96SN7 254 aa15.91■□□□□ 0.14
TULP4-206ENST00000616856 BACH2Q9BYV9 841 aa15.91■□□□□ 0.14
TULP4-206ENST00000616856 POLKQ9UBT6 870 aa15.91■□□□□ 0.14
TULP4-206ENST00000616856 ZBTB47Q9UFB7 747 aaPredicted RBP15.91■□□□□ 0.14
TULP4-206ENST00000616856 RUNDC1Q96C34 613 aa15.9■□□□□ 0.14
TULP4-206ENST00000616856 EMILIN1Q9Y6C2 1016 aa15.9■□□□□ 0.14
TULP4-206ENST00000616856 TTC21AQ8NDW8 1320 aa15.9■□□□□ 0.14
TULP4-206ENST00000616856 ZNF335Q9H4Z2 1342 aaPredicted RBP15.9■□□□□ 0.14
TULP4-206ENST00000616856 SOX12O15370 315 aa15.9■□□□□ 0.14
TULP4-206ENST00000616856 RRS1Q15050 365 aaKnown RBP15.9■□□□□ 0.14
TULP4-206ENST00000616856 CENPQQ7L2Z9 268 aaPredicted RBP15.89■□□□□ 0.13
TULP4-206ENST00000616856 OVOS2A0A0J9YW53 1432 aa15.89■□□□□ 0.13
TULP4-206ENST00000616856 OVOS2Q6IE36 1432 aa15.89■□□□□ 0.13
TULP4-206ENST00000616856 NPM2Q86SE8 214 aaKnown RBP15.89■□□□□ 0.13
TULP4-206ENST00000616856 ATF3P18847 181 aa15.88■□□□□ 0.13
TULP4-206ENST00000616856 NUTM2GQ5VZR2 741 aa15.88■□□□□ 0.13
TULP4-206ENST00000616856 PHF23Q9BUL5 403 aaPredicted RBP15.88■□□□□ 0.13
TULP4-206ENST00000616856 COL3A1P02461 1466 aaPredicted RBP15.88■□□□□ 0.13
TULP4-206ENST00000616856 U2SURPO15042 1029 aaKnown RBP15.88■□□□□ 0.13
TULP4-206ENST00000616856 U2AF1L5P0DN76 240 aaPredicted RBP15.88■□□□□ 0.13
TULP4-206ENST00000616856 U2AF1Q01081 240 aaKnown RBP eCLIP15.88■□□□□ 0.13
TULP4-206ENST00000616856 PIK3C2AO00443 1686 aa15.87■□□□□ 0.13
TULP4-206ENST00000616856 PSME1Q06323 249 aa15.87■□□□□ 0.13
TULP4-206ENST00000616856 AATKQ6ZMQ8 1374 aa15.87■□□□□ 0.13
TULP4-206ENST00000616856 C1orf167Q5SNV9 1468 aa15.86■□□□□ 0.13
TULP4-206ENST00000616856 FOXO3O43524 673 aa15.86■□□□□ 0.13
TULP4-206ENST00000616856 DIAPH1O60610 1272 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms