RNA–Protein interactions for RNA: ENST00000616706.4

LINC00598-207, long intergenic non-protein coding RNA 598, humanhuman

TSL 1 (best) BASIC

Gene LINC00598, Length 2,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-207ENST00000616706 NWD1Q149M9 1564 aa13.63□□□□□ -0.23
LINC00598-207ENST00000616706 GOLGA2Q08379 1002 aa13.63□□□□□ -0.23
LINC00598-207ENST00000616706 C19orf44Q9H6X5 657 aa13.63□□□□□ -0.23
LINC00598-207ENST00000616706 ADGRB2O60241 1585 aa13.62□□□□□ -0.23
LINC00598-207ENST00000616706 APAF1O14727 1248 aa13.62□□□□□ -0.23
LINC00598-207ENST00000616706 MSH5O43196 834 aa13.62□□□□□ -0.23
LINC00598-207ENST00000616706 MORC1Q86VD1 984 aa13.62□□□□□ -0.23
LINC00598-207ENST00000616706 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.23
LINC00598-207ENST00000616706 ATP7BP35670 1465 aa13.62□□□□□ -0.23
LINC00598-207ENST00000616706 IQSEC2Q5JU85 1478 aa13.62□□□□□ -0.23
LINC00598-207ENST00000616706 ADGRL3Q9HAR2 1447 aa13.62□□□□□ -0.23
LINC00598-207ENST00000616706 ACEP12821 1306 aa13.62□□□□□ -0.23
LINC00598-207ENST00000616706 PLEKHG3A1L390 1219 aa13.62□□□□□ -0.23
LINC00598-207ENST00000616706 NGDNQ8NEJ9 315 aaKnown RBP13.62□□□□□ -0.23
LINC00598-207ENST00000616706 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
LINC00598-207ENST00000616706 CGNL1Q0VF96 1302 aa13.61□□□□□ -0.23
LINC00598-207ENST00000616706 SLFN5Q08AF3 891 aa13.61□□□□□ -0.23
LINC00598-207ENST00000616706 CD163L1Q9NR16 1453 aa13.61□□□□□ -0.23
LINC00598-207ENST00000616706 STRCP1A6NGW2 1772 aa13.61□□□□□ -0.23
LINC00598-207ENST00000616706 ATF3P18847 181 aa13.6□□□□□ -0.23
LINC00598-207ENST00000616706 TNNT2P45379 298 aaPredicted RBP13.6□□□□□ -0.23
LINC00598-207ENST00000616706 ESCO1Q5FWF5 840 aa13.6□□□□□ -0.23
LINC00598-207ENST00000616706 TRMT2AQ8IZ69 625 aaKnown RBP13.6□□□□□ -0.23
LINC00598-207ENST00000616706 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
LINC00598-207ENST00000616706 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
LINC00598-207ENST00000616706 NSD2O96028 1365 aa13.6□□□□□ -0.23
LINC00598-207ENST00000616706 CRBNQ96SW2 442 aa13.6□□□□□ -0.23
LINC00598-207ENST00000616706 ANP32EQ9BTT0 268 aa13.6□□□□□ -0.23
LINC00598-207ENST00000616706 GGNBP2Q9H3C7 697 aa13.59□□□□□ -0.23
LINC00598-207ENST00000616706 NALCNQ8IZF0 1738 aa13.59□□□□□ -0.23
LINC00598-207ENST00000616706 C20orf194Q5TEA3 1177 aa13.59□□□□□ -0.23
LINC00598-207ENST00000616706 FYB1O15117 783 aa13.58□□□□□ -0.24
LINC00598-207ENST00000616706 ORAI2Q96SN7 254 aa13.58□□□□□ -0.24
LINC00598-207ENST00000616706 PHF8Q9UPP1 1060 aa13.58□□□□□ -0.24
LINC00598-207ENST00000616706 CPSF1Q10570 1443 aaKnown RBP13.57□□□□□ -0.24
LINC00598-207ENST00000616706 ANKARQ7Z5J8 1434 aa13.56□□□□□ -0.24
LINC00598-207ENST00000616706 RGPD8O14715 1765 aaPredicted RBP13.56□□□□□ -0.24
LINC00598-207ENST00000616706 NCOA3Q9Y6Q9 1424 aa13.56□□□□□ -0.24
LINC00598-207ENST00000616706 MTHFSP49914 203 aa13.55□□□□□ -0.24
LINC00598-207ENST00000616706 CADPS2Q86UW7 1296 aa13.55□□□□□ -0.24
LINC00598-207ENST00000616706 NME9Q86XW9 330 aa13.55□□□□□ -0.24
LINC00598-207ENST00000616706 MSH6P52701 1360 aa13.55□□□□□ -0.24
LINC00598-207ENST00000616706 CDC42BPGQ6DT37 1551 aa13.55□□□□□ -0.24
LINC00598-207ENST00000616706 LRRC7Q96NW7 1537 aa13.55□□□□□ -0.24
LINC00598-207ENST00000616706 NGEFQ8N5V2 710 aa13.55□□□□□ -0.24
LINC00598-207ENST00000616706 ZRANB1Q9UGI0 708 aa13.55□□□□□ -0.24
LINC00598-207ENST00000616706 FMN2Q9NZ56 1722 aa13.55□□□□□ -0.24
LINC00598-207ENST00000616706 COL3A1P02461 1466 aaPredicted RBP13.54□□□□□ -0.24
LINC00598-207ENST00000616706 E9PSI1 815 aa13.54□□□□□ -0.24
LINC00598-207ENST00000616706 PSME1Q06323 249 aa13.54□□□□□ -0.24
LINC00598-207ENST00000616706 TTC21BQ7Z4L5 1316 aa13.54□□□□□ -0.24
LINC00598-207ENST00000616706 FOXO3O43524 673 aa13.54□□□□□ -0.24
LINC00598-207ENST00000616706 MYT1Q01538 1121 aa13.54□□□□□ -0.24
LINC00598-207ENST00000616706 EDC4Q6P2E9 1401 aaKnown RBP13.54□□□□□ -0.24
LINC00598-207ENST00000616706 PAK3O75914 559 aaPredicted RBP13.53□□□□□ -0.24
LINC00598-207ENST00000616706 WWC1Q8IX03 1113 aa13.53□□□□□ -0.24
LINC00598-207ENST00000616706 RUNDC1Q96C34 613 aa13.53□□□□□ -0.24
LINC00598-207ENST00000616706 MAP2P11137 1827 aaKnown RBP13.53□□□□□ -0.24
LINC00598-207ENST00000616706 XPCQ01831 940 aaPredicted RBP13.52□□□□□ -0.25
LINC00598-207ENST00000616706 C1orf167Q5SNV9 1468 aa13.52□□□□□ -0.25
LINC00598-207ENST00000616706 TOPAZ1Q8N9V7 1692 aa13.52□□□□□ -0.25
LINC00598-207ENST00000616706 USP6P35125 1406 aa13.51□□□□□ -0.25
LINC00598-207ENST00000616706 FBLN1P23142 703 aa13.51□□□□□ -0.25
LINC00598-207ENST00000616706 CFAP53Q96M91 514 aa13.51□□□□□ -0.25
LINC00598-207ENST00000616706 COG3Q96JB2 828 aa13.51□□□□□ -0.25
LINC00598-207ENST00000616706 MON2Q7Z3U7 1717 aa13.5□□□□□ -0.25
LINC00598-207ENST00000616706 AKAP12Q02952 1782 aa13.5□□□□□ -0.25
LINC00598-207ENST00000616706 NUTM2GQ5VZR2 741 aa13.5□□□□□ -0.25
LINC00598-207ENST00000616706 TCP11L2Q8N4U5 519 aa13.5□□□□□ -0.25
LINC00598-207ENST00000616706 PHF23Q9BUL5 403 aaPredicted RBP13.5□□□□□ -0.25
LINC00598-207ENST00000616706 SLAIN2Q9P270 581 aa13.5□□□□□ -0.25
LINC00598-207ENST00000616706 RRP7AQ9Y3A4 280 aaKnown RBP13.5□□□□□ -0.25
LINC00598-207ENST00000616706 ITSN1Q15811 1721 aa13.5□□□□□ -0.25
LINC00598-207ENST00000616706 BCAR3O75815 825 aa13.49□□□□□ -0.25
LINC00598-207ENST00000616706 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.49□□□□□ -0.25
LINC00598-207ENST00000616706 DDX17Q92841 729 aaKnown RBP13.49□□□□□ -0.25
LINC00598-207ENST00000616706 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
LINC00598-207ENST00000616706 MST1RQ04912 1400 aa13.49□□□□□ -0.25
LINC00598-207ENST00000616706 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
LINC00598-207ENST00000616706 NEUROD2Q15784 382 aa13.49□□□□□ -0.25
LINC00598-207ENST00000616706 ABTB2Q8N961 1025 aa13.49□□□□□ -0.25
LINC00598-207ENST00000616706 DCCP43146 1447 aa13.49□□□□□ -0.25
LINC00598-207ENST00000616706 KRT28Q7Z3Y7 464 aa13.48□□□□□ -0.25
LINC00598-207ENST00000616706 XIRP1Q702N8 1843 aaKnown RBP13.48□□□□□ -0.25
LINC00598-207ENST00000616706 SOX12O15370 315 aa13.48□□□□□ -0.25
LINC00598-207ENST00000616706 NLRP6P59044 892 aa13.48□□□□□ -0.25
LINC00598-207ENST00000616706 TTC21AQ8NDW8 1320 aa13.48□□□□□ -0.25
LINC00598-207ENST00000616706 SSH2Q76I76 1423 aa13.47□□□□□ -0.25
LINC00598-207ENST00000616706 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
LINC00598-207ENST00000616706 LMOD2Q6P5Q4 547 aa13.47□□□□□ -0.25
LINC00598-207ENST00000616706 SKAP1Q86WV1 359 aa13.47□□□□□ -0.25
LINC00598-207ENST00000616706 VIRMAQ69YN4 1812 aaKnown RBP13.47□□□□□ -0.25
LINC00598-207ENST00000616706 PPM1GO15355 546 aaPredicted RBP13.46□□□□□ -0.25
LINC00598-207ENST00000616706 CCDC27Q2M243 656 aa13.46□□□□□ -0.26
LINC00598-207ENST00000616706 U2AF1L5P0DN76 240 aaPredicted RBP13.45□□□□□ -0.26
LINC00598-207ENST00000616706 U2AF1Q01081 240 aaKnown RBP eCLIP13.45□□□□□ -0.26
LINC00598-207ENST00000616706 BRINP3Q76B58 766 aa13.45□□□□□ -0.26
LINC00598-207ENST00000616706 WDR63Q8IWG1 891 aa13.44□□□□□ -0.26
LINC00598-207ENST00000616706 MS4A1P11836 297 aa13.44□□□□□ -0.26
LINC00598-207ENST00000616706 RRS1Q15050 365 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms