RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 ALS2Q96Q42 1657 aa44.45■■■■■ 4.71
FMR1-216ENST00000616614 C11orf95C9JLR9 678 aaPredicted RBP44.44■■■■■ 4.7
FMR1-216ENST00000616614 CABLES1Q8TDN4 633 aa44.43■■■■■ 4.7
FMR1-216ENST00000616614 PLEKHG5O94827 1062 aa44.42■■■■■ 4.7
FMR1-216ENST00000616614 KTN1Q86UP2 1357 aaKnown RBP44.4■■■■■ 4.7
FMR1-216ENST00000616614 NINLQ9Y2I6 1382 aa44.39■■■■■ 4.7
FMR1-216ENST00000616614 NUTM2GQ5VZR2 741 aa44.38■■■■■ 4.69
FMR1-216ENST00000616614 A0A1W2PP64 1363 aa44.38■■■■■ 4.69
FMR1-216ENST00000616614 BRD4O60885 1362 aaPredicted RBP44.38■■■■■ 4.69
FMR1-216ENST00000616614 AKAP12Q02952 1782 aa44.37■■■■■ 4.69
FMR1-216ENST00000616614 ADAMTS2O95450 1211 aa44.37■■■■■ 4.69
FMR1-216ENST00000616614 HDGFL2Q7Z4V5 671 aaPredicted RBP44.35■■■■■ 4.69
FMR1-216ENST00000616614 ABTB2Q8N961 1025 aa44.35■■■■■ 4.69
FMR1-216ENST00000616614 TERF2IPQ9NYB0 399 aa44.35■■■■■ 4.69
FMR1-216ENST00000616614 TTC21BQ7Z4L5 1316 aa44.35■■■■■ 4.69
FMR1-216ENST00000616614 MEX3CQ5U5Q3 659 aaKnown RBP44.33■■■■■ 4.69
FMR1-216ENST00000616614 POLR3GLQ9BT43 218 aa44.33■■■■■ 4.69
FMR1-216ENST00000616614 RGS17Q9UGC6 210 aaPredicted RBP44.29■■■■■ 4.68
FMR1-216ENST00000616614 MON2Q7Z3U7 1717 aa44.28■■■■■ 4.68
FMR1-216ENST00000616614 NRKQ7Z2Y5 1582 aa44.28■■■■■ 4.68
FMR1-216ENST00000616614 ANKRD36BQ8N2N9 1353 aa44.27■■■■■ 4.68
FMR1-216ENST00000616614 SUGP2Q8IX01 1082 aaKnown RBP eCLIP44.25■■■■■ 4.67
FMR1-216ENST00000616614 C8orf37Q96NL8 207 aa44.25■■■■■ 4.67
FMR1-216ENST00000616614 PHF23Q9BUL5 403 aaPredicted RBP44.25■■■■■ 4.67
FMR1-216ENST00000616614 MYOM1P52179 1685 aa44.25■■■■■ 4.67
FMR1-216ENST00000616614 TTC21AQ8NDW8 1320 aa44.24■■■■■ 4.67
FMR1-216ENST00000616614 HAP1P54257 671 aaPredicted RBP44.23■■■■■ 4.67
FMR1-216ENST00000616614 EDC4Q6P2E9 1401 aaKnown RBP44.22■■■■■ 4.67
FMR1-216ENST00000616614 NLRP6P59044 892 aa44.22■■■■■ 4.67
FMR1-216ENST00000616614 ABCA3Q99758 1704 aa44.22■■■■■ 4.67
FMR1-216ENST00000616614 KIF7Q2M1P5 1343 aa44.21■■■■■ 4.67
FMR1-216ENST00000616614 ZEB1P37275 1124 aaPredicted RBP44.21■■■■■ 4.67
FMR1-216ENST00000616614 NLRP13Q86W25 1043 aa44.21■■■■■ 4.67
FMR1-216ENST00000616614 PIK3C2AO00443 1686 aa44.21■■■■■ 4.67
FMR1-216ENST00000616614 USP19O94966 1318 aa44.2■■■■■ 4.67
FMR1-216ENST00000616614 ZRANB1Q9UGI0 708 aa44.2■■■■■ 4.67
FMR1-216ENST00000616614 CRYBG1Q9Y4K1 1723 aa44.2■■■■■ 4.67
FMR1-216ENST00000616614 NME9Q86XW9 330 aa44.19■■■■■ 4.66
FMR1-216ENST00000616614 CARD14Q9BXL6 1004 aa44.17■■■■■ 4.66
FMR1-216ENST00000616614 NGLY1Q96IV0 654 aa44.16■■■■■ 4.66
FMR1-216ENST00000616614 AFF2P51816 1311 aa44.15■■■■■ 4.66
FMR1-216ENST00000616614 FAM83GA6ND36 823 aa44.1■■■■■ 4.65
FMR1-216ENST00000616614 GCP02774 474 aa44.1■■■■■ 4.65
FMR1-216ENST00000616614 FNBP4Q8N3X1 1017 aaPredicted RBP44.1■■■■■ 4.65
FMR1-216ENST00000616614 PHRF1Q9P1Y6 1649 aaKnown RBP44.1■■■■■ 4.65
FMR1-216ENST00000616614 USP31Q70CQ4 1352 aa44.09■■■■■ 4.65
FMR1-216ENST00000616614 WASHC2AQ641Q2 1341 aa44.08■■■■■ 4.65
FMR1-216ENST00000616614 ZC3H6P61129 1189 aaKnown RBP44.07■■■■■ 4.65
FMR1-216ENST00000616614 MARF1Q9Y4F3 1742 aaKnown RBP44.07■■■■■ 4.65
FMR1-216ENST00000616614 POTEAQ6S8J7 498 aa44.07■■■■■ 4.64
FMR1-216ENST00000616614 CCDC7Q96M83 1385 aa44.06■■■■■ 4.64
FMR1-216ENST00000616614 SLIT3O75094 1523 aa44.05■■■■■ 4.64
FMR1-216ENST00000616614 PANK3Q9H999 370 aa44.05■■■■■ 4.64
FMR1-216ENST00000616614 KIAA0232Q92628 1395 aa44.05■■■■■ 4.64
FMR1-216ENST00000616614 NSD3Q9BZ95 1437 aa44.02■■■■■ 4.64
FMR1-216ENST00000616614 ZNF772Q68DY9 489 aaPredicted RBP44.02■■■■■ 4.64
FMR1-216ENST00000616614 FYB1O15117 783 aa44.01■■■■■ 4.64
FMR1-216ENST00000616614 USP21Q9UK80 565 aa44.01■■■■■ 4.64
FMR1-216ENST00000616614 SLIT2O94813 1529 aa44■■■■■ 4.63
FMR1-216ENST00000616614 BCL9LQ86UU0 1499 aa44■■■■■ 4.63
FMR1-216ENST00000616614 OVOS2A0A0J9YW53 1432 aa43.99■■■■■ 4.63
FMR1-216ENST00000616614 OVOS2Q6IE36 1432 aa43.99■■■■■ 4.63
FMR1-216ENST00000616614 CHRNA2Q15822 529 aa43.99■■■■■ 4.63
FMR1-216ENST00000616614 PRDM11Q9NQV5 511 aa43.99■■■■■ 4.63
FMR1-216ENST00000616614 SOX12O15370 315 aa43.97■■■■■ 4.63
FMR1-216ENST00000616614 GGNBP2Q9H3C7 697 aa43.96■■■■■ 4.63
FMR1-216ENST00000616614 CPDO75976 1380 aa43.96■■■■■ 4.63
FMR1-216ENST00000616614 USP54Q70EL1 1684 aa43.94■■■■■ 4.63
FMR1-216ENST00000616614 KCNH5Q8NCM2 988 aa43.93■■■■■ 4.62
FMR1-216ENST00000616614 BTG4Q9NY30 223 aa43.91■■■■■ 4.62
FMR1-216ENST00000616614 UNC5CLQ8IV45 518 aa43.9■■■■■ 4.62
FMR1-216ENST00000616614 QTRT2Q9H974 415 aaKnown RBP43.9■■■■■ 4.62
FMR1-216ENST00000616614 NFAT5O94916 1531 aa43.9■■■■■ 4.62
FMR1-216ENST00000616614 COG3Q96JB2 828 aa43.9■■■■■ 4.62
FMR1-216ENST00000616614 ILDR2Q71H61 639 aa43.89■■■■■ 4.62
FMR1-216ENST00000616614 COL14A1Q05707 1796 aaKnown RBP43.88■■■■■ 4.62
FMR1-216ENST00000616614 ARHGEF25Q86VW2 580 aa43.88■■■■■ 4.61
FMR1-216ENST00000616614 PLCH1Q4KWH8 1693 aa43.87■■■■■ 4.61
FMR1-216ENST00000616614 ZBTB7CA1YPR0 619 aa43.86■■■■■ 4.61
FMR1-216ENST00000616614 ATRNO75882 1429 aa43.84■■■■■ 4.61
FMR1-216ENST00000616614 FBLN1P23142 703 aa43.83■■■■■ 4.61
FMR1-216ENST00000616614 TRPC5Q9UL62 973 aaPredicted RBP43.83■■■■■ 4.61
FMR1-216ENST00000616614 CGNL1Q0VF96 1302 aa43.83■■■■■ 4.61
FMR1-216ENST00000616614 CAMTA1Q9Y6Y1 1673 aa43.8■■■■■ 4.6
FMR1-216ENST00000616614 AATKQ6ZMQ8 1374 aa43.8■■■■■ 4.6
FMR1-216ENST00000616614 NWD2Q9ULI1 1742 aa43.79■■■■■ 4.6
FMR1-216ENST00000616614 PER1O15534 1290 aaPredicted RBP43.78■■■■■ 4.6
FMR1-216ENST00000616614 AXIN2Q9Y2T1 843 aa43.78■■■■■ 4.6
FMR1-216ENST00000616614 LMO7Q8WWI1 1683 aa43.78■■■■■ 4.6
FMR1-216ENST00000616614 KIF20BQ96Q89 1820 aa43.78■■■■■ 4.6
FMR1-216ENST00000616614 NRAPQ86VF7 1730 aa43.76■■■■■ 4.6
FMR1-216ENST00000616614 TNKS1BP1Q9C0C2 1729 aaKnown RBP43.75■■■■■ 4.59
FMR1-216ENST00000616614 RXRBP28702 533 aa43.75■■■■■ 4.59
FMR1-216ENST00000616614 VPS72Q15906 364 aa43.74■■■■■ 4.59
FMR1-216ENST00000616614 KNSTRNQ9Y448 316 aa43.73■■■■■ 4.59
FMR1-216ENST00000616614 COL18A1P39060 1754 aa43.72■■■■■ 4.59
FMR1-216ENST00000616614 RBM6P78332 1123 aaKnown RBP43.72■■■■■ 4.59
FMR1-216ENST00000616614 GJD4Q96KN9 370 aaPredicted RBP43.72■■■■■ 4.59
FMR1-216ENST00000616614 STRN4Q9NRL3 753 aa43.72■■■■■ 4.59
FMR1-216ENST00000616614 AMER1Q5JTC6 1135 aaPredicted RBP43.7■■■■■ 4.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms