RNA–Protein interactions for RNA: ENST00000616289.1

PDLIM2-219, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-219ENST00000616289 CCDC9Q9Y3X0 531 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-219ENST00000616289 PHRF1Q9P1Y6 1649 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-219ENST00000616289 ONECUT3O60422 494 aaPredicted RBP15.59■□□□□ 0.09
PDLIM2-219ENST00000616289 NGDNQ8NEJ9 315 aaKnown RBP15.59■□□□□ 0.09
PDLIM2-219ENST00000616289 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
PDLIM2-219ENST00000616289 BTG4Q9NY30 223 aa15.58■□□□□ 0.08
PDLIM2-219ENST00000616289 PAK3O75914 559 aaPredicted RBP15.57■□□□□ 0.08
PDLIM2-219ENST00000616289 KRT27Q7Z3Y8 459 aa15.57■□□□□ 0.08
PDLIM2-219ENST00000616289 NUDT16Q96DE0 195 aaKnown RBP15.57■□□□□ 0.08
PDLIM2-219ENST00000616289 DEFB132Q7Z7B7 95 aa15.56■□□□□ 0.08
PDLIM2-219ENST00000616289 THSD7AQ9UPZ6 1657 aa15.55■□□□□ 0.08
PDLIM2-219ENST00000616289 A0A0G2JS52 829 aa15.55■□□□□ 0.08
PDLIM2-219ENST00000616289 MYT1Q01538 1121 aa15.55■□□□□ 0.08
PDLIM2-219ENST00000616289 FAM98CQ17RN3 349 aaKnown RBP15.55■□□□□ 0.08
PDLIM2-219ENST00000616289 POLR3AO14802 1390 aaPredicted RBP15.54■□□□□ 0.08
PDLIM2-219ENST00000616289 CDK19Q9BWU1 502 aa15.54■□□□□ 0.08
PDLIM2-219ENST00000616289 NRKQ7Z2Y5 1582 aa15.53■□□□□ 0.08
PDLIM2-219ENST00000616289 KIAA0232Q92628 1395 aa15.53■□□□□ 0.08
PDLIM2-219ENST00000616289 NBPF1Q3BBV0 1214 aa15.53■□□□□ 0.08
PDLIM2-219ENST00000616289 PRDM11Q9NQV5 511 aa15.53■□□□□ 0.08
PDLIM2-219ENST00000616289 SPATA31A5Q5VU36 1347 aa15.52■□□□□ 0.08
PDLIM2-219ENST00000616289 SPATA31A7Q8IWB4 1347 aa15.52■□□□□ 0.08
PDLIM2-219ENST00000616289 QRICH2Q9H0J4 1663 aa15.52■□□□□ 0.08
PDLIM2-219ENST00000616289 SF3B2Q13435 895 aaKnown RBP15.52■□□□□ 0.08
PDLIM2-219ENST00000616289 ACEP12821 1306 aa15.51■□□□□ 0.07
PDLIM2-219ENST00000616289 RGPD1P0DJD0 1748 aa15.51■□□□□ 0.07
PDLIM2-219ENST00000616289 CHRNA2Q15822 529 aa15.5■□□□□ 0.07
PDLIM2-219ENST00000616289 NUTM2GQ5VZR2 741 aa15.5■□□□□ 0.07
PDLIM2-219ENST00000616289 CCDC61Q9Y6R9 512 aa15.5■□□□□ 0.07
PDLIM2-219ENST00000616289 TNS1Q9HBL0 1735 aaKnown RBP15.49■□□□□ 0.07
PDLIM2-219ENST00000616289 NBPF8Q3BBV2 869 aa15.49■□□□□ 0.07
PDLIM2-219ENST00000616289 LMO7Q8WWI1 1683 aa15.48■□□□□ 0.07
PDLIM2-219ENST00000616289 PLEKHG3A1L390 1219 aa15.48■□□□□ 0.07
PDLIM2-219ENST00000616289 ZC3H6P61129 1189 aaKnown RBP15.48■□□□□ 0.07
PDLIM2-219ENST00000616289 FAM182BQ5T319 152 aa15.48■□□□□ 0.07
PDLIM2-219ENST00000616289 PPIP5K1Q6PFW1 1433 aa15.48■□□□□ 0.07
PDLIM2-219ENST00000616289 SPATA31A1Q5TZJ5 1347 aa15.47■□□□□ 0.07
PDLIM2-219ENST00000616289 CENPJQ9HC77 1338 aaPredicted RBP15.47■□□□□ 0.07
PDLIM2-219ENST00000616289 TRPM1Q7Z4N2 1603 aa15.46■□□□□ 0.07
PDLIM2-219ENST00000616289 BAG6P46379 1132 aa15.46■□□□□ 0.07
PDLIM2-219ENST00000616289 STRN4Q9NRL3 753 aa15.46■□□□□ 0.07
PDLIM2-219ENST00000616289 LRP5O75197 1615 aa15.46■□□□□ 0.06
PDLIM2-219ENST00000616289 USP19O94966 1318 aa15.45■□□□□ 0.06
PDLIM2-219ENST00000616289 CAMTA1Q9Y6Y1 1673 aa15.45■□□□□ 0.06
PDLIM2-219ENST00000616289 SSH2Q76I76 1423 aa15.45■□□□□ 0.06
PDLIM2-219ENST00000616289 SRPK2P78362 688 aaKnown RBP15.45■□□□□ 0.06
PDLIM2-219ENST00000616289 ABTB2Q8N961 1025 aa15.45■□□□□ 0.06
PDLIM2-219ENST00000616289 CABP2Q9NPB3 220 aa15.44■□□□□ 0.06
PDLIM2-219ENST00000616289 CPDO75976 1380 aa15.44■□□□□ 0.06
PDLIM2-219ENST00000616289 DISP2A7MBM2 1401 aa15.43■□□□□ 0.06
PDLIM2-219ENST00000616289 L3MBTL2Q969R5 705 aa15.42■□□□□ 0.06
PDLIM2-219ENST00000616289 USP35Q9P2H5 1018 aa15.42■□□□□ 0.06
PDLIM2-219ENST00000616289 USP6P35125 1406 aa15.42■□□□□ 0.06
PDLIM2-219ENST00000616289 PIK3C2AO00443 1686 aa15.41■□□□□ 0.06
PDLIM2-219ENST00000616289 PSDA5PKW4 1024 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-219ENST00000616289 EN1Q05925 392 aaPredicted RBP15.41■□□□□ 0.06
PDLIM2-219ENST00000616289 SLIT3O75094 1523 aa15.41■□□□□ 0.06
PDLIM2-219ENST00000616289 COL5A2P05997 1499 aaPredicted RBP15.4■□□□□ 0.06
PDLIM2-219ENST00000616289 LARP1Q6PKG0 1096 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-219ENST00000616289 NLRP13Q86W25 1043 aa15.4■□□□□ 0.06
PDLIM2-219ENST00000616289 BRD4O60885 1362 aaPredicted RBP15.39■□□□□ 0.05
PDLIM2-219ENST00000616289 GCP02774 474 aa15.39■□□□□ 0.05
PDLIM2-219ENST00000616289 EVA1CP58658 441 aa15.39■□□□□ 0.05
PDLIM2-219ENST00000616289 BARGINQ6ZT62 677 aa15.39■□□□□ 0.05
PDLIM2-219ENST00000616289 SIN3AQ96ST3 1273 aa15.39■□□□□ 0.05
PDLIM2-219ENST00000616289 PARP4Q9UKK3 1724 aaKnown RBP15.38■□□□□ 0.05
PDLIM2-219ENST00000616289 CABP1Q9NZU7 370 aa15.38■□□□□ 0.05
PDLIM2-219ENST00000616289 AKAP12Q02952 1782 aa15.37■□□□□ 0.05
PDLIM2-219ENST00000616289 TRIM37O94972 964 aa15.37■□□□□ 0.05
PDLIM2-219ENST00000616289 EZH2Q15910 746 aaKnown RBP15.37■□□□□ 0.05
PDLIM2-219ENST00000616289 FAM196AQ6ZSG2 479 aa15.37■□□□□ 0.05
PDLIM2-219ENST00000616289 RREB1Q92766 1687 aa15.37■□□□□ 0.05
PDLIM2-219ENST00000616289 ROCK2O75116 1388 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-219ENST00000616289 TCP11L2Q8N4U5 519 aa15.36■□□□□ 0.05
PDLIM2-219ENST00000616289 EVC2Q86UK5 1308 aa15.36■□□□□ 0.05
PDLIM2-219ENST00000616289 COL18A1P39060 1754 aa15.35■□□□□ 0.05
PDLIM2-219ENST00000616289 NLRP6P59044 892 aa15.35■□□□□ 0.05
PDLIM2-219ENST00000616289 WNK3Q9BYP7 1800 aa15.35■□□□□ 0.05
PDLIM2-219ENST00000616289 LRRC37A3O60309 1634 aa15.35■□□□□ 0.05
PDLIM2-219ENST00000616289 CRB1P82279 1406 aa15.34■□□□□ 0.05
PDLIM2-219ENST00000616289 NUP188Q5SRE5 1749 aa15.34■□□□□ 0.05
PDLIM2-219ENST00000616289 ZBTB7CA1YPR0 619 aa15.34■□□□□ 0.05
PDLIM2-219ENST00000616289 NEUROD1Q13562 356 aa15.34■□□□□ 0.05
PDLIM2-219ENST00000616289 CAMKK2Q96RR4 588 aa15.34■□□□□ 0.05
PDLIM2-219ENST00000616289 THRAP3Q9Y2W1 955 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-219ENST00000616289 PDE3BQ13370 1112 aa15.33■□□□□ 0.04
PDLIM2-219ENST00000616289 R3HDM1Q15032 1099 aaKnown RBP15.33■□□□□ 0.04
PDLIM2-219ENST00000616289 PEAK1Q9H792 1746 aa15.33■□□□□ 0.04
PDLIM2-219ENST00000616289 AATKQ6ZMQ8 1374 aa15.33■□□□□ 0.04
PDLIM2-219ENST00000616289 APBA3O96018 575 aa15.32■□□□□ 0.04
PDLIM2-219ENST00000616289 PARD3Q8TEW0 1356 aa15.32■□□□□ 0.04
PDLIM2-219ENST00000616289 CPSF1Q10570 1443 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-219ENST00000616289 MON2Q7Z3U7 1717 aa15.31■□□□□ 0.04
PDLIM2-219ENST00000616289 RGPD5Q99666 1765 aa15.3■□□□□ 0.04
PDLIM2-219ENST00000616289 NFAT5O94916 1531 aa15.29■□□□□ 0.04
PDLIM2-219ENST00000616289 OVOS2A0A0G2JMS6 1433 aa15.29■□□□□ 0.04
PDLIM2-219ENST00000616289 OVOS2A0A0J9YW53 1432 aa15.29■□□□□ 0.04
PDLIM2-219ENST00000616289 OVOS2Q6IE36 1432 aa15.29■□□□□ 0.04
PDLIM2-219ENST00000616289 TTC21BQ7Z4L5 1316 aa15.29■□□□□ 0.04
PDLIM2-219ENST00000616289 SBNO2Q9Y2G9 1366 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms