RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 NKTRP30414 1462 aaKnown RBP13.3□□□□□ -0.28
AL353770.3-201ENST00000616253 NRKQ7Z2Y5 1582 aa13.3□□□□□ -0.28
AL353770.3-201ENST00000616253 PDE3BQ13370 1112 aa13.3□□□□□ -0.28
AL353770.3-201ENST00000616253 NPHP4O75161 1426 aaPredicted RBP13.3□□□□□ -0.28
AL353770.3-201ENST00000616253 RGPD8O14715 1765 aaPredicted RBP13.29□□□□□ -0.28
AL353770.3-201ENST00000616253 NUTM2FA1L443 756 aa13.29□□□□□ -0.28
AL353770.3-201ENST00000616253 COL3A1P02461 1466 aaPredicted RBP13.28□□□□□ -0.28
AL353770.3-201ENST00000616253 NALCNQ8IZF0 1738 aa13.28□□□□□ -0.28
AL353770.3-201ENST00000616253 FMN2Q9NZ56 1722 aa13.27□□□□□ -0.28
AL353770.3-201ENST00000616253 IRX6P78412 446 aaPredicted RBP13.27□□□□□ -0.28
AL353770.3-201ENST00000616253 NME9Q86XW9 330 aa13.27□□□□□ -0.28
AL353770.3-201ENST00000616253 MAP2P11137 1827 aaKnown RBP13.27□□□□□ -0.29
AL353770.3-201ENST00000616253 CDCA7LQ96GN5 454 aa13.27□□□□□ -0.29
AL353770.3-201ENST00000616253 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
AL353770.3-201ENST00000616253 LTBP4Q8N2S1 1624 aa13.27□□□□□ -0.29
AL353770.3-201ENST00000616253 ACEP12821 1306 aa13.26□□□□□ -0.29
AL353770.3-201ENST00000616253 PLEKHG3A1L390 1219 aa13.26□□□□□ -0.29
AL353770.3-201ENST00000616253 APAF1O14727 1248 aa13.25□□□□□ -0.29
AL353770.3-201ENST00000616253 ILDR2Q71H61 639 aa13.25□□□□□ -0.29
AL353770.3-201ENST00000616253 USP6P35125 1406 aa13.24□□□□□ -0.29
AL353770.3-201ENST00000616253 ANKARQ7Z5J8 1434 aa13.24□□□□□ -0.29
AL353770.3-201ENST00000616253 ZNF521Q96K83 1311 aa13.24□□□□□ -0.29
AL353770.3-201ENST00000616253 ZRANB1Q9UGI0 708 aa13.24□□□□□ -0.29
AL353770.3-201ENST00000616253 NWD1Q149M9 1564 aa13.23□□□□□ -0.29
AL353770.3-201ENST00000616253 COG3Q96JB2 828 aa13.23□□□□□ -0.29
AL353770.3-201ENST00000616253 TTC21BQ7Z4L5 1316 aa13.23□□□□□ -0.29
AL353770.3-201ENST00000616253 PNPLA6Q8IY17 1366 aa13.22□□□□□ -0.29
AL353770.3-201ENST00000616253 U2AF1L5P0DN76 240 aaPredicted RBP13.22□□□□□ -0.29
AL353770.3-201ENST00000616253 U2AF1Q01081 240 aaKnown RBP eCLIP13.22□□□□□ -0.29
AL353770.3-201ENST00000616253 RUNDC1Q96C34 613 aa13.22□□□□□ -0.29
AL353770.3-201ENST00000616253 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
AL353770.3-201ENST00000616253 FBLN1P23142 703 aa13.21□□□□□ -0.29
AL353770.3-201ENST00000616253 PMFBP1Q8TBY8 1022 aa13.21□□□□□ -0.29
AL353770.3-201ENST00000616253 POLKQ9UBT6 870 aa13.21□□□□□ -0.29
AL353770.3-201ENST00000616253 AATKQ6ZMQ8 1374 aa13.21□□□□□ -0.29
AL353770.3-201ENST00000616253 ADGRL3Q9HAR2 1447 aa13.21□□□□□ -0.29
AL353770.3-201ENST00000616253 SSH2Q76I76 1423 aa13.2□□□□□ -0.3
AL353770.3-201ENST00000616253 CDK12Q9NYV4 1490 aaPredicted RBP13.2□□□□□ -0.3
AL353770.3-201ENST00000616253 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
AL353770.3-201ENST00000616253 NGEFQ8N5V2 710 aa13.2□□□□□ -0.3
AL353770.3-201ENST00000616253 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
AL353770.3-201ENST00000616253 OVOS2A0A0J9YW53 1432 aa13.2□□□□□ -0.3
AL353770.3-201ENST00000616253 OVOS2Q6IE36 1432 aa13.2□□□□□ -0.3
AL353770.3-201ENST00000616253 U2SURPO15042 1029 aaKnown RBP13.2□□□□□ -0.3
AL353770.3-201ENST00000616253 PPM1GO15355 546 aaPredicted RBP13.2□□□□□ -0.3
AL353770.3-201ENST00000616253 DIAPH1O60610 1272 aaKnown RBP13.2□□□□□ -0.3
AL353770.3-201ENST00000616253 NGDNQ8NEJ9 315 aaKnown RBP13.2□□□□□ -0.3
AL353770.3-201ENST00000616253 RCAN3Q9UKA8 241 aa13.2□□□□□ -0.3
AL353770.3-201ENST00000616253 EMILIN1Q9Y6C2 1016 aa13.19□□□□□ -0.3
AL353770.3-201ENST00000616253 ERICH6BQ5W0A0 696 aa13.18□□□□□ -0.3
AL353770.3-201ENST00000616253 TCP11L2Q8N4U5 519 aa13.18□□□□□ -0.3
AL353770.3-201ENST00000616253 DUSP27Q5VZP5 1158 aa13.18□□□□□ -0.3
AL353770.3-201ENST00000616253 RRP7AQ9Y3A4 280 aaKnown RBP13.18□□□□□ -0.3
AL353770.3-201ENST00000616253 TTC21AQ8NDW8 1320 aa13.18□□□□□ -0.3
AL353770.3-201ENST00000616253 PIK3C2AO00443 1686 aa13.17□□□□□ -0.3
AL353770.3-201ENST00000616253 SLFN5Q08AF3 891 aa13.17□□□□□ -0.3
AL353770.3-201ENST00000616253 RRS1Q15050 365 aaKnown RBP13.17□□□□□ -0.3
AL353770.3-201ENST00000616253 LRRC7Q96NW7 1537 aa13.16□□□□□ -0.3
AL353770.3-201ENST00000616253 NEUROD2Q15784 382 aa13.16□□□□□ -0.3
AL353770.3-201ENST00000616253 RRP1P56182 461 aaKnown RBP13.16□□□□□ -0.3
AL353770.3-201ENST00000616253 WWC1Q8IX03 1113 aa13.16□□□□□ -0.3
AL353770.3-201ENST00000616253 C14orf37Q86TY3 774 aa13.15□□□□□ -0.3
AL353770.3-201ENST00000616253 PLEKHF1Q96S99 279 aa13.15□□□□□ -0.3
AL353770.3-201ENST00000616253 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
AL353770.3-201ENST00000616253 USP31Q70CQ4 1352 aa13.15□□□□□ -0.31
AL353770.3-201ENST00000616253 E9PSI1 815 aa13.14□□□□□ -0.31
AL353770.3-201ENST00000616253 TRMT2AQ8IZ69 625 aaKnown RBP13.14□□□□□ -0.31
AL353770.3-201ENST00000616253 MARF1Q9Y4F3 1742 aaKnown RBP13.14□□□□□ -0.31
AL353770.3-201ENST00000616253 MAPK8IP3Q9UPT6 1336 aa13.14□□□□□ -0.31
AL353770.3-201ENST00000616253 PHF23Q9BUL5 403 aaPredicted RBP13.14□□□□□ -0.31
AL353770.3-201ENST00000616253 STRCP1A6NGW2 1772 aa13.14□□□□□ -0.31
AL353770.3-201ENST00000616253 PEAK1Q9H792 1746 aa13.14□□□□□ -0.31
AL353770.3-201ENST00000616253 USP54Q70EL1 1684 aa13.14□□□□□ -0.31
AL353770.3-201ENST00000616253 PPP4R2Q9NY27 417 aa13.13□□□□□ -0.31
AL353770.3-201ENST00000616253 PHF8Q9UPP1 1060 aa13.13□□□□□ -0.31
AL353770.3-201ENST00000616253 IL13P35225 146 aa13.12□□□□□ -0.31
AL353770.3-201ENST00000616253 CCDC27Q2M243 656 aa13.12□□□□□ -0.31
AL353770.3-201ENST00000616253 PROSER2Q86WR7 435 aaPredicted RBP13.12□□□□□ -0.31
AL353770.3-201ENST00000616253 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
AL353770.3-201ENST00000616253 SOX12O15370 315 aa13.11□□□□□ -0.31
AL353770.3-201ENST00000616253 FCHSD2O94868 740 aa13.11□□□□□ -0.31
AL353770.3-201ENST00000616253 RSPH6AQ9H0K4 717 aa13.11□□□□□ -0.31
AL353770.3-201ENST00000616253 PNNQ9H307 717 aaKnown RBP13.11□□□□□ -0.31
AL353770.3-201ENST00000616253 PRKAR2BP31323 418 aa13.1□□□□□ -0.31
AL353770.3-201ENST00000616253 TMPOP42166 694 aaKnown RBP13.1□□□□□ -0.31
AL353770.3-201ENST00000616253 ESCO1Q5FWF5 840 aa13.1□□□□□ -0.31
AL353770.3-201ENST00000616253 WDR63Q8IWG1 891 aa13.1□□□□□ -0.31
AL353770.3-201ENST00000616253 HMOX1P09601 288 aa13.09□□□□□ -0.31
AL353770.3-201ENST00000616253 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
AL353770.3-201ENST00000616253 NLRP6P59044 892 aa13.08□□□□□ -0.32
AL353770.3-201ENST00000616253 NUTM2GQ5VZR2 741 aa13.08□□□□□ -0.32
AL353770.3-201ENST00000616253 MAP3K19Q56UN5 1328 aa13.08□□□□□ -0.32
AL353770.3-201ENST00000616253 RGPD1P0DJD0 1748 aa13.07□□□□□ -0.32
AL353770.3-201ENST00000616253 UBAP1LF5GYI3 381 aa13.07□□□□□ -0.32
AL353770.3-201ENST00000616253 PLIN1O60240 522 aa13.07□□□□□ -0.32
AL353770.3-201ENST00000616253 EIF4A2Q14240 407 aaKnown RBP13.07□□□□□ -0.32
AL353770.3-201ENST00000616253 ABTB2Q8N961 1025 aa13.07□□□□□ -0.32
AL353770.3-201ENST00000616253 KIF1AQ12756 1690 aa13.07□□□□□ -0.32
AL353770.3-201ENST00000616253 SBNO1A3KN83 1393 aa13.07□□□□□ -0.32
AL353770.3-201ENST00000616253 TMEM94Q12767 1356 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms