RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 TRIM22Q8IYM9 498 aa15.02■□□□□ -0
TCF4-248ENST00000616053 MPHOSPH8Q99549 860 aa15.02■□□□□ -0
TCF4-248ENST00000616053 CENPHQ9H3R5 247 aa15.02■□□□□ -0
TCF4-248ENST00000616053 INCENPQ9NQS7 918 aa15.02□□□□□ -0.01
TCF4-248ENST00000616053 ARL1P40616 181 aaPredicted RBP15.01□□□□□ -0.01
TCF4-248ENST00000616053 TAF12Q16514 161 aa15.01□□□□□ -0.01
TCF4-248ENST00000616053 DDX11L8A8MPP1 907 aa15.01□□□□□ -0.01
TCF4-248ENST00000616053 FERMT2Q96AC1 680 aa15.01□□□□□ -0.01
TCF4-248ENST00000616053 RABEP1Q15276 862 aa15.01□□□□□ -0.01
TCF4-248ENST00000616053 CARMIL2Q6F5E8 1435 aa15.01□□□□□ -0.01
TCF4-248ENST00000616053 TXLNBQ8N3L3 684 aa15.01□□□□□ -0.01
TCF4-248ENST00000616053 DDX54Q8TDD1 881 aaKnown RBP15.01□□□□□ -0.01
TCF4-248ENST00000616053 IFT57Q9NWB7 429 aa15□□□□□ -0.01
TCF4-248ENST00000616053 NACAP1Q9BZK3 213 aa15□□□□□ -0.01
TCF4-248ENST00000616053 DNAJC2Q99543 621 aaKnown RBP15□□□□□ -0.01
TCF4-248ENST00000616053 ZBTB24O43167 697 aaPredicted RBP15□□□□□ -0.01
TCF4-248ENST00000616053 TOM1L2Q6ZVM7 507 aa15□□□□□ -0.01
TCF4-248ENST00000616053 MPHOSPH6Q99547 160 aaKnown RBP15□□□□□ -0.01
TCF4-248ENST00000616053 PROSER2Q86WR7 435 aaPredicted RBP14.99□□□□□ -0.01
TCF4-248ENST00000616053 ZNF219Q9P2Y4 722 aaPredicted RBP14.99□□□□□ -0.01
TCF4-248ENST00000616053 TSPYL4Q9UJ04 414 aa14.99□□□□□ -0.01
TCF4-248ENST00000616053 FERP16591 822 aa14.99□□□□□ -0.01
TCF4-248ENST00000616053 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.99□□□□□ -0.012e-6■■■■□ 26.4
TCF4-248ENST00000616053 MINK1Q8N4C8 1332 aaPredicted RBP14.99□□□□□ -0.01
TCF4-248ENST00000616053 SH3BP5O60239 455 aa14.98□□□□□ -0.01
TCF4-248ENST00000616053 EP400NLQ6ZTU2 488 aa14.98□□□□□ -0.01
TCF4-248ENST00000616053 LIG1P18858 919 aa14.98□□□□□ -0.01
TCF4-248ENST00000616053 CCDC158Q5M9N0 1113 aa14.98□□□□□ -0.01
TCF4-248ENST00000616053 E9PSI1 815 aa14.98□□□□□ -0.01
TCF4-248ENST00000616053 PIBF1Q8WXW3 757 aa14.98□□□□□ -0.01
TCF4-248ENST00000616053 PPP1R12BO60237 982 aaPredicted RBP14.98□□□□□ -0.01
TCF4-248ENST00000616053 RAB3IL1Q8TBN0 382 aa14.98□□□□□ -0.01
TCF4-248ENST00000616053 SPATA24Q86W54 205 aa14.97□□□□□ -0.01
TCF4-248ENST00000616053 SMC1AQ14683 1233 aaKnown RBP14.97□□□□□ -0.01
TCF4-248ENST00000616053 GPRASP1Q5JY77 1395 aa14.97□□□□□ -0.01
TCF4-248ENST00000616053 JAKMIP3Q5VZ66 844 aa14.97□□□□□ -0.01
TCF4-248ENST00000616053 DYDC1Q8WWB3 177 aa14.97□□□□□ -0.01
TCF4-248ENST00000616053 GOLGA6L10A0A0M3HER8 536 aa14.97□□□□□ -0.01
TCF4-248ENST00000616053 GIGYF2Q6Y7W6 1299 aaKnown RBP14.97□□□□□ -0.01
TCF4-248ENST00000616053 EIF3JO75822 258 aaKnown RBP14.96□□□□□ -0.01
TCF4-248ENST00000616053 ESCO1Q5FWF5 840 aa14.96□□□□□ -0.01
TCF4-248ENST00000616053 CENPQQ7L2Z9 268 aaPredicted RBP14.96□□□□□ -0.01
TCF4-248ENST00000616053 FSD1Q9BTV5 496 aa14.96□□□□□ -0.01
TCF4-248ENST00000616053 ANKRD18BA2A2Z9 1011 aa14.96□□□□□ -0.01
TCF4-248ENST00000616053 NUP133Q8WUM0 1156 aa14.96□□□□□ -0.02
TCF4-248ENST00000616053 NOC2LQ9Y3T9 749 aaKnown RBP14.95□□□□□ -0.02
TCF4-248ENST00000616053 CCDC69A6NI79 296 aa14.95□□□□□ -0.02
TCF4-248ENST00000616053 CCDC117Q8IWD4 279 aaPredicted RBP14.95□□□□□ -0.02
TCF4-248ENST00000616053 PRPF31Q8WWY3 499 aaKnown RBP14.95□□□□□ -0.02
TCF4-248ENST00000616053 LRRC45Q96CN5 670 aa14.95□□□□□ -0.02
TCF4-248ENST00000616053 HOOK3Q86VS8 718 aa14.95□□□□□ -0.02
TCF4-248ENST00000616053 SIN3AQ96ST3 1273 aa14.95□□□□□ -0.02
TCF4-248ENST00000616053 SMC2O95347 1197 aa14.95□□□□□ -0.02
TCF4-248ENST00000616053 FERMT1Q9BQL6 677 aa14.95□□□□□ -0.02
TCF4-248ENST00000616053 ZPR1O75312 459 aa14.95□□□□□ -0.02
TCF4-248ENST00000616053 CCDC57Q2TAC2 916 aa14.95□□□□□ -0.02
TCF4-248ENST00000616053 EVC2Q86UK5 1308 aa14.94□□□□□ -0.02
TCF4-248ENST00000616053 ROCK1Q13464 1354 aa14.94□□□□□ -0.02
TCF4-248ENST00000616053 ECM2O94769 699 aaPredicted RBP14.94□□□□□ -0.02
TCF4-248ENST00000616053 PSMA5P28066 241 aa14.94□□□□□ -0.02
TCF4-248ENST00000616053 VGFO15240 615 aaPredicted RBP14.94□□□□□ -0.02
TCF4-248ENST00000616053 TSNARE1Q96NA8 513 aa14.94□□□□□ -0.02
TCF4-248ENST00000616053 CCDC175P0C221 793 aa14.93□□□□□ -0.02
TCF4-248ENST00000616053 CTNNA2P26232 953 aa14.93□□□□□ -0.02
TCF4-248ENST00000616053 RALBP1Q15311 655 aa14.93□□□□□ -0.02
TCF4-248ENST00000616053 TRIM5Q9C035 493 aa14.93□□□□□ -0.02
TCF4-248ENST00000616053 BCL2L13Q9BXK5 485 aa14.93□□□□□ -0.02
TCF4-248ENST00000616053 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.93□□□□□ -0.02
TCF4-248ENST00000616053 CABP4P57796 275 aa14.93□□□□□ -0.02
TCF4-248ENST00000616053 FHAD1B1AJZ9 1412 aa14.93□□□□□ -0.02
TCF4-248ENST00000616053 NINLQ9Y2I6 1382 aa14.93□□□□□ -0.02
TCF4-248ENST00000616053 CWC15Q9P013 229 aaKnown RBP14.93□□□□□ -0.02
TCF4-248ENST00000616053 FMNL2Q96PY5 1086 aa14.92□□□□□ -0.02
TCF4-248ENST00000616053 NUP155O75694 1391 aa14.92□□□□□ -0.02
TCF4-248ENST00000616053 MACROD2A1Z1Q3 448 aa14.91□□□□□ -0.02
TCF4-248ENST00000616053 KIAA0754O94854 1291 aa14.91□□□□□ -0.02
TCF4-248ENST00000616053 TATP17735 454 aaPredicted RBP14.91□□□□□ -0.02
TCF4-248ENST00000616053 CUL5Q93034 780 aa14.91□□□□□ -0.02
TCF4-248ENST00000616053 SKOR2Q2VWA4 1001 aaPredicted RBP14.91□□□□□ -0.02
TCF4-248ENST00000616053 CFAP57Q96MR6 1250 aa14.91□□□□□ -0.02
TCF4-248ENST00000616053 RAI14Q9P0K7 980 aa14.91□□□□□ -0.02
TCF4-248ENST00000616053 CTNNBL1Q8WYA6 563 aaPredicted RBP14.9□□□□□ -0.02
TCF4-248ENST00000616053 CIZ1Q9ULV3 898 aaPredicted RBP14.9□□□□□ -0.02
TCF4-248ENST00000616053 UBTFL1P0CB47 393 aaPredicted RBP14.9□□□□□ -0.02
TCF4-248ENST00000616053 NOL7Q9UMY1 257 aaKnown RBP14.9□□□□□ -0.02
TCF4-248ENST00000616053 KINO60870 393 aaKnown RBP14.9□□□□□ -0.02
TCF4-248ENST00000616053 SEC63Q9UGP8 760 aaKnown RBP14.9□□□□□ -0.02
TCF4-248ENST00000616053 ANKIB1Q9P2G1 1089 aa14.9□□□□□ -0.02
TCF4-248ENST00000616053 ABTB2Q8N961 1025 aa14.9□□□□□ -0.02
TCF4-248ENST00000616053 SLC26A8Q96RN1 970 aa14.9□□□□□ -0.02
TCF4-248ENST00000616053 EHMT1Q9H9B1 1298 aa14.9□□□□□ -0.02
TCF4-248ENST00000616053 ZNF287Q9HBT7 754 aa14.89□□□□□ -0.03
TCF4-248ENST00000616053 GSTTP1A0A1W2PQM5 241 aa14.89□□□□□ -0.03
TCF4-248ENST00000616053 OTUD6BQ8N6M0 293 aa14.89□□□□□ -0.03
TCF4-248ENST00000616053 UTP14AQ9BVJ6 771 aaKnown RBP14.89□□□□□ -0.03
TCF4-248ENST00000616053 HNRNPMP52272 730 aaKnown RBP eCLIP14.89□□□□□ -0.037e-6■■■□□ 17
TCF4-248ENST00000616053 LMAN1P49257 510 aa14.89□□□□□ -0.03
TCF4-248ENST00000616053 PPFIBP1Q86W92 1011 aa14.89□□□□□ -0.03
TCF4-248ENST00000616053 NLRP6P59044 892 aa14.89□□□□□ -0.03
TCF4-248ENST00000616053 FAM69CQ0P6D2 419 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms