RNA–Protein interactions for RNA: ENST00000615951.4

CDK11B-206, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,227 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-206ENST00000615951 ARHGAP23Q9P227 1491 aa24.48■■□□□ 1.51
CDK11B-206ENST00000615951 CPSF1Q10570 1443 aaKnown RBP24.47■■□□□ 1.51
CDK11B-206ENST00000615951 ADGRB2O60241 1585 aa24.47■■□□□ 1.51
CDK11B-206ENST00000615951 ANP32AP39687 249 aaKnown RBP24.47■■□□□ 1.51
CDK11B-206ENST00000615951 EXOC6Q8TAG9 804 aa24.47■■□□□ 1.51
CDK11B-206ENST00000615951 ZMYND15Q9H091 742 aa24.47■■□□□ 1.51
CDK11B-206ENST00000615951 GGNBP2Q9H3C7 697 aa24.47■■□□□ 1.51
CDK11B-206ENST00000615951 PHF23Q9BUL5 403 aaPredicted RBP24.46■■□□□ 1.51
CDK11B-206ENST00000615951 CCDC27Q2M243 656 aa24.45■■□□□ 1.5
CDK11B-206ENST00000615951 TXNDC2Q86VQ3 553 aa24.45■■□□□ 1.5
CDK11B-206ENST00000615951 CDC42BPGQ6DT37 1551 aa24.44■■□□□ 1.5
CDK11B-206ENST00000615951 EDC4Q6P2E9 1401 aaKnown RBP24.44■■□□□ 1.5
CDK11B-206ENST00000615951 WWC1Q8IX03 1113 aa24.44■■□□□ 1.5
CDK11B-206ENST00000615951 PPIP5K1Q6PFW1 1433 aa24.43■■□□□ 1.5
CDK11B-206ENST00000615951 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.42■■□□□ 1.5
CDK11B-206ENST00000615951 PNPLA6Q8IY17 1366 aa24.42■■□□□ 1.5
CDK11B-206ENST00000615951 TCP11L2Q8N4U5 519 aa24.42■■□□□ 1.5
CDK11B-206ENST00000615951 MON2Q7Z3U7 1717 aa24.41■■□□□ 1.5
CDK11B-206ENST00000615951 WDR63Q8IWG1 891 aa24.41■■□□□ 1.5
CDK11B-206ENST00000615951 LTKP29376 864 aa24.41■■□□□ 1.5
CDK11B-206ENST00000615951 SPINK5Q9NQ38 1064 aaPredicted RBP24.41■■□□□ 1.5
CDK11B-206ENST00000615951 EID1Q9Y6B2 187 aa24.41■■□□□ 1.5
CDK11B-206ENST00000615951 CEBPAP49715 358 aaPredicted RBP24.4■■□□□ 1.5
CDK11B-206ENST00000615951 BRPF3Q9ULD4 1205 aa24.4■■□□□ 1.5
CDK11B-206ENST00000615951 AKAP12Q02952 1782 aa24.4■■□□□ 1.5
CDK11B-206ENST00000615951 DIP2AQ14689 1571 aa24.4■■□□□ 1.5
CDK11B-206ENST00000615951 ROBO2Q9HCK4 1378 aa24.39■■□□□ 1.49
CDK11B-206ENST00000615951 NUDT16Q96DE0 195 aaKnown RBP24.39■■□□□ 1.49
CDK11B-206ENST00000615951 PLIN1O60240 522 aa24.38■■□□□ 1.49
CDK11B-206ENST00000615951 U2AF1L5P0DN76 240 aaPredicted RBP24.38■■□□□ 1.49
CDK11B-206ENST00000615951 U2AF1Q01081 240 aaKnown RBP eCLIP24.38■■□□□ 1.49
CDK11B-206ENST00000615951 CCDC61Q9Y6R9 512 aa24.38■■□□□ 1.49
CDK11B-206ENST00000615951 ITSN1Q15811 1721 aa24.37■■□□□ 1.49
CDK11B-206ENST00000615951 DMRT2Q9Y5R5 561 aa24.36■■□□□ 1.49
CDK11B-206ENST00000615951 CRBNQ96SW2 442 aa24.35■■□□□ 1.49
CDK11B-206ENST00000615951 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.35■■□□□ 1.49
CDK11B-206ENST00000615951 TBX22Q9Y458 520 aa24.35■■□□□ 1.49
CDK11B-206ENST00000615951 TOPAZ1Q8N9V7 1692 aa24.35■■□□□ 1.49
CDK11B-206ENST00000615951 THEMISQ8N1K5 641 aaPredicted RBP24.34■■□□□ 1.49
CDK11B-206ENST00000615951 VSIG10Q8N0Z9 540 aa24.34■■□□□ 1.49
CDK11B-206ENST00000615951 ZNF692Q9BU19 519 aaPredicted RBP24.33■■□□□ 1.49
CDK11B-206ENST00000615951 PLEKHF1Q96S99 279 aa24.33■■□□□ 1.48
CDK11B-206ENST00000615951 PNNQ9H307 717 aaKnown RBP24.33■■□□□ 1.48
CDK11B-206ENST00000615951 PTPRUQ92729 1446 aa24.32■■□□□ 1.48
CDK11B-206ENST00000615951 AATKQ6ZMQ8 1374 aa24.32■■□□□ 1.48
CDK11B-206ENST00000615951 DIAPH1O60610 1272 aaKnown RBP24.32■■□□□ 1.48
CDK11B-206ENST00000615951 PTCH1Q13635 1447 aa24.32■■□□□ 1.48
CDK11B-206ENST00000615951 NEFMP07197 916 aa24.31■■□□□ 1.48
CDK11B-206ENST00000615951 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.31■■□□□ 1.48
CDK11B-206ENST00000615951 RRP7AQ9Y3A4 280 aaKnown RBP24.3■■□□□ 1.48
CDK11B-206ENST00000615951 PRR36Q9H6K5 1346 aa24.3■■□□□ 1.48
CDK11B-206ENST00000615951 U2SURPO15042 1029 aaKnown RBP24.28■■□□□ 1.48
CDK11B-206ENST00000615951 C20orf194Q5TEA3 1177 aa24.28■■□□□ 1.48
CDK11B-206ENST00000615951 POLKQ9UBT6 870 aa24.28■■□□□ 1.48
CDK11B-206ENST00000615951 CDK12Q9NYV4 1490 aaPredicted RBP24.27■■□□□ 1.48
CDK11B-206ENST00000615951 NRKQ7Z2Y5 1582 aa24.27■■□□□ 1.48
CDK11B-206ENST00000615951 NEUROD2Q15784 382 aa24.27■■□□□ 1.48
CDK11B-206ENST00000615951 MAP2P11137 1827 aaKnown RBP24.26■■□□□ 1.47
CDK11B-206ENST00000615951 MYH16Q9H6N6 1097 aa24.26■■□□□ 1.47
CDK11B-206ENST00000615951 PLEKHG3A1L390 1219 aa24.26■■□□□ 1.47
CDK11B-206ENST00000615951 CEP170BQ9Y4F5 1589 aaPredicted RBP24.26■■□□□ 1.47
CDK11B-206ENST00000615951 XRN1Q8IZH2 1706 aaKnown RBP24.25■■□□□ 1.47
CDK11B-206ENST00000615951 MAPK8IP3Q9UPT6 1336 aa24.25■■□□□ 1.47
CDK11B-206ENST00000615951 SLC26A8Q96RN1 970 aa24.25■■□□□ 1.47
CDK11B-206ENST00000615951 FCHSD2O94868 740 aa24.24■■□□□ 1.47
CDK11B-206ENST00000615951 TMPOP42166 694 aaKnown RBP24.24■■□□□ 1.47
CDK11B-206ENST00000615951 NME9Q86XW9 330 aa24.23■■□□□ 1.47
CDK11B-206ENST00000615951 PIK3R4Q99570 1358 aa24.23■■□□□ 1.47
CDK11B-206ENST00000615951 IL16Q14005 1332 aa24.23■■□□□ 1.47
CDK11B-206ENST00000615951 FAM43AQ8N2R8 423 aa24.23■■□□□ 1.47
CDK11B-206ENST00000615951 COG3Q96JB2 828 aa24.23■■□□□ 1.47
CDK11B-206ENST00000615951 AMOTL2Q9Y2J4 779 aa24.23■■□□□ 1.47
CDK11B-206ENST00000615951 PDE3AQ14432 1141 aa24.22■■□□□ 1.47
CDK11B-206ENST00000615951 RIMS1Q86UR5 1692 aaKnown RBP24.21■■□□□ 1.47
CDK11B-206ENST00000615951 BCAR3O75815 825 aa24.21■■□□□ 1.47
CDK11B-206ENST00000615951 NCKAP5LQ9HCH0 1330 aa24.21■■□□□ 1.47
CDK11B-206ENST00000615951 CT47B1P0C2W7 299 aaPredicted RBP24.2■■□□□ 1.47
CDK11B-206ENST00000615951 LRRC7Q96NW7 1537 aa24.2■■□□□ 1.47
CDK11B-206ENST00000615951 TCERG1O14776 1098 aaKnown RBP24.2■■□□□ 1.46
CDK11B-206ENST00000615951 GSE1Q14687 1217 aa24.2■■□□□ 1.46
CDK11B-206ENST00000615951 ZNF142P52746 1687 aaPredicted RBP24.2■■□□□ 1.46
CDK11B-206ENST00000615951 PPM1GO15355 546 aaPredicted RBP24.18■■□□□ 1.46
CDK11B-206ENST00000615951 TRIM35Q9UPQ4 493 aa24.18■■□□□ 1.46
CDK11B-206ENST00000615951 RARSP54136 660 aaKnown RBP24.18■■□□□ 1.46
CDK11B-206ENST00000615951 USP6P35125 1406 aa24.17■■□□□ 1.46
CDK11B-206ENST00000615951 ADAMTSL3P82987 1691 aa24.17■■□□□ 1.46
CDK11B-206ENST00000615951 TTC21BQ7Z4L5 1316 aa24.17■■□□□ 1.46
CDK11B-206ENST00000615951 KDM2BQ8NHM5 1336 aa24.17■■□□□ 1.46
CDK11B-206ENST00000615951 ACEP12821 1306 aa24.16■■□□□ 1.46
CDK11B-206ENST00000615951 NALCNQ8IZF0 1738 aa24.15■■□□□ 1.46
CDK11B-206ENST00000615951 OVOS2A0A0J9YW53 1432 aa24.15■■□□□ 1.46
CDK11B-206ENST00000615951 OVOS2Q6IE36 1432 aa24.15■■□□□ 1.46
CDK11B-206ENST00000615951 SSH2Q76I76 1423 aa24.15■■□□□ 1.46
CDK11B-206ENST00000615951 MS4A1P11836 297 aa24.15■■□□□ 1.46
CDK11B-206ENST00000615951 IL13P35225 146 aa24.15■■□□□ 1.46
CDK11B-206ENST00000615951 CENPQQ7L2Z9 268 aaPredicted RBP24.15■■□□□ 1.46
CDK11B-206ENST00000615951 ZRANB1Q9UGI0 708 aa24.15■■□□□ 1.46
CDK11B-206ENST00000615951 PLPPR3Q6T4P5 718 aa24.14■■□□□ 1.46
CDK11B-206ENST00000615951 EMILIN1Q9Y6C2 1016 aa24.14■■□□□ 1.46
CDK11B-206ENST00000615951 ANKARQ7Z5J8 1434 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms