RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 TWISTNBQ3B726 338 aaPredicted RBP11.06□□□□□ -0.64
SPTBN1-207ENST00000615901 RALGAPBQ86X10 1494 aa11.06□□□□□ -0.64
SPTBN1-207ENST00000615901 MEX3CQ5U5Q3 659 aaKnown RBP11.06□□□□□ -0.64
SPTBN1-207ENST00000615901 FOXD4L5Q5VV16 416 aaPredicted RBP11.06□□□□□ -0.64
SPTBN1-207ENST00000615901 FOXD4L4Q8WXT5 416 aaPredicted RBP11.06□□□□□ -0.64
SPTBN1-207ENST00000615901 TRIM34Q9BYJ4 488 aa11.05□□□□□ -0.64
SPTBN1-207ENST00000615901 MARCH6O60337 910 aa11.05□□□□□ -0.64
SPTBN1-207ENST00000615901 LNPKQ9C0E8 428 aa11.05□□□□□ -0.64
SPTBN1-207ENST00000615901 CABP1Q9NZU7 370 aa11.05□□□□□ -0.64
SPTBN1-207ENST00000615901 EIF4G3O43432 1585 aaKnown RBP11.05□□□□□ -0.64
SPTBN1-207ENST00000615901 ESCO1Q5FWF5 840 aa11.05□□□□□ -0.64
SPTBN1-207ENST00000615901 SYCP2Q9BX26 1530 aa11.05□□□□□ -0.64
SPTBN1-207ENST00000615901 ARHGEF12Q9NZN5 1544 aa11.05□□□□□ -0.64
SPTBN1-207ENST00000615901 NUP153P49790 1475 aaKnown RBP11.04□□□□□ -0.64
SPTBN1-207ENST00000615901 BECN2A8MW95 431 aa11.04□□□□□ -0.64
SPTBN1-207ENST00000615901 FCHSD2O94868 740 aa11.04□□□□□ -0.64
SPTBN1-207ENST00000615901 DNMT1P26358 1616 aaKnown RBP11.04□□□□□ -0.64
SPTBN1-207ENST00000615901 RABEP1Q15276 862 aa11.04□□□□□ -0.64
SPTBN1-207ENST00000615901 SYTL4Q96C24 671 aaPredicted RBP11.04□□□□□ -0.64
SPTBN1-207ENST00000615901 PPP6R1Q9UPN7 881 aa11.04□□□□□ -0.64
SPTBN1-207ENST00000615901 TEX14Q8IWB6 1497 aa11.04□□□□□ -0.64
SPTBN1-207ENST00000615901 TSR1Q2NL82 804 aaKnown RBP11.04□□□□□ -0.64
SPTBN1-207ENST00000615901 APPP05067 770 aa11.04□□□□□ -0.64
SPTBN1-207ENST00000615901 MCM2P49736 904 aa11.04□□□□□ -0.64
SPTBN1-207ENST00000615901 SMC3Q9UQE7 1217 aa11.04□□□□□ -0.64
SPTBN1-207ENST00000615901 ERICH2A1L162 156 aa11.04□□□□□ -0.64
SPTBN1-207ENST00000615901 TPD52L1Q16890 204 aaPredicted RBP11.04□□□□□ -0.64
SPTBN1-207ENST00000615901 RAPGEF3O95398 923 aa11.03□□□□□ -0.64
SPTBN1-207ENST00000615901 GNAI2P04899 355 aa11.03□□□□□ -0.64
SPTBN1-207ENST00000615901 NKTRP30414 1462 aaKnown RBP11.03□□□□□ -0.64
SPTBN1-207ENST00000615901 PROSER2Q86WR7 435 aaPredicted RBP11.03□□□□□ -0.64
SPTBN1-207ENST00000615901 KIF6Q6ZMV9 814 aa11.03□□□□□ -0.64
SPTBN1-207ENST00000615901 ANKLE2Q86XL3 938 aa11.03□□□□□ -0.64
SPTBN1-207ENST00000615901 SLC12A5Q9H2X9 1139 aa11.03□□□□□ -0.64
SPTBN1-207ENST00000615901 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.03□□□□□ -0.64
SPTBN1-207ENST00000615901 VPS53Q5VIR6 699 aa11.03□□□□□ -0.64
SPTBN1-207ENST00000615901 NUTM2GQ5VZR2 741 aa11.03□□□□□ -0.64
SPTBN1-207ENST00000615901 ANKRD20A12PQ8NF67 263 aa11.03□□□□□ -0.64
SPTBN1-207ENST00000615901 GOLGA6L1Q8N7Z2 621 aa11.03□□□□□ -0.64
SPTBN1-207ENST00000615901 EXOSC9Q06265 439 aaKnown RBP11.03□□□□□ -0.64
SPTBN1-207ENST00000615901 RALYLQ86SE5 291 aaKnown RBP11.02□□□□□ -0.64
SPTBN1-207ENST00000615901 NFXL1Q6ZNB6 911 aa11.02□□□□□ -0.65
SPTBN1-207ENST00000615901 TATP17735 454 aaPredicted RBP11.02□□□□□ -0.65
SPTBN1-207ENST00000615901 NOB1Q9ULX3 412 aaKnown RBP11.02□□□□□ -0.65
SPTBN1-207ENST00000615901 SAFBQ15424 915 aaKnown RBP eCLIP11.02□□□□□ -0.65
SPTBN1-207ENST00000615901 CLASRPQ8N2M8 674 aaKnown RBP11.02□□□□□ -0.65
SPTBN1-207ENST00000615901 ABCA5Q8WWZ7 1642 aa11.02□□□□□ -0.65
SPTBN1-207ENST00000615901 MAPKBP1O60336 1514 aa11.01□□□□□ -0.65
SPTBN1-207ENST00000615901 DHX29Q7Z478 1369 aaKnown RBP11.01□□□□□ -0.65
SPTBN1-207ENST00000615901 MVPQ14764 893 aaKnown RBP11.01□□□□□ -0.65
SPTBN1-207ENST00000615901 CCDC47Q96A33 483 aaKnown RBP11.01□□□□□ -0.65
SPTBN1-207ENST00000615901 CDCA7LQ96GN5 454 aa11.01□□□□□ -0.65
SPTBN1-207ENST00000615901 RSPH6AQ9H0K4 717 aa11.01□□□□□ -0.65
SPTBN1-207ENST00000615901 SPG7Q9UQ90 795 aa11.01□□□□□ -0.65
SPTBN1-207ENST00000615901 ZNF518AQ6AHZ1 1483 aa11.01□□□□□ -0.65
SPTBN1-207ENST00000615901 FSD1Q9BTV5 496 aa11.01□□□□□ -0.65
SPTBN1-207ENST00000615901 GCC2Q8IWJ2 1684 aa11□□□□□ -0.65
SPTBN1-207ENST00000615901 MAST1Q9Y2H9 1570 aa11□□□□□ -0.65
SPTBN1-207ENST00000615901 WDR7Q9Y4E6 1490 aa11□□□□□ -0.65
SPTBN1-207ENST00000615901 PDCP20941 246 aa11□□□□□ -0.65
SPTBN1-207ENST00000615901 CCDC73Q6ZRK6 1079 aa11□□□□□ -0.65
SPTBN1-207ENST00000615901 SRCIN1Q9C0H9 1055 aa11□□□□□ -0.65
SPTBN1-207ENST00000615901 SLC4A3P48751 1232 aa11□□□□□ -0.65
SPTBN1-207ENST00000615901 ATF7IPQ6VMQ6 1270 aa11□□□□□ -0.65
SPTBN1-207ENST00000615901 RBM33Q96EV2 1170 aaKnown RBP11□□□□□ -0.65
SPTBN1-207ENST00000615901 TBC1D2BQ9UPU7 963 aa11□□□□□ -0.65
SPTBN1-207ENST00000615901 BRMS1Q9HCU9 246 aa11□□□□□ -0.65
SPTBN1-207ENST00000615901 ZNF530Q6P9A1 599 aaPredicted RBP10.99□□□□□ -0.65
SPTBN1-207ENST00000615901 BICD2Q8TD16 824 aa10.99□□□□□ -0.65
SPTBN1-207ENST00000615901 TCEAL9Q9UHQ7 104 aa10.99□□□□□ -0.65
SPTBN1-207ENST00000615901 SULT6B1Q6IMI4 303 aa10.99□□□□□ -0.65
SPTBN1-207ENST00000615901 HDGFL1Q5TGJ6 251 aa10.99□□□□□ -0.65
SPTBN1-207ENST00000615901 PLCH2O75038 1416 aa10.99□□□□□ -0.65
SPTBN1-207ENST00000615901 VPS37CA5D8V6 355 aaPredicted RBP10.99□□□□□ -0.65
SPTBN1-207ENST00000615901 SART3Q15020 963 aaKnown RBP10.99□□□□□ -0.65
SPTBN1-207ENST00000615901 TSR2Q969E8 191 aaKnown RBP10.99□□□□□ -0.65
SPTBN1-207ENST00000615901 AIMP1Q12904 312 aaKnown RBP10.99□□□□□ -0.65
SPTBN1-207ENST00000615901 NAT10Q9H0A0 1025 aaKnown RBP10.99□□□□□ -0.65
SPTBN1-207ENST00000615901 NFE2L2Q16236 605 aa10.99□□□□□ -0.65
SPTBN1-207ENST00000615901 NOS1P29475 1434 aa10.98□□□□□ -0.65
SPTBN1-207ENST00000615901 LETM1O95202 739 aaPredicted RBP10.98□□□□□ -0.65
SPTBN1-207ENST00000615901 NEUROD6Q96NK8 337 aa10.98□□□□□ -0.65
SPTBN1-207ENST00000615901 PDZRN3Q9UPQ7 1066 aa10.98□□□□□ -0.65
SPTBN1-207ENST00000615901 ASXL1Q8IXJ9 1541 aa10.98□□□□□ -0.65
SPTBN1-207ENST00000615901 DHX16O60231 1041 aaKnown RBP10.98□□□□□ -0.65
SPTBN1-207ENST00000615901 CCDC70Q6NSX1 233 aa10.98□□□□□ -0.65
SPTBN1-207ENST00000615901 MBD3O95983 291 aa10.98□□□□□ -0.65
SPTBN1-207ENST00000615901 CREBRFQ8IUR6 639 aa10.98□□□□□ -0.65
SPTBN1-207ENST00000615901 KCNH5Q8NCM2 988 aa10.97□□□□□ -0.65
SPTBN1-207ENST00000615901 SURF6O75683 361 aaKnown RBP10.97□□□□□ -0.65
SPTBN1-207ENST00000615901 SLC4A2P04920 1241 aa10.97□□□□□ -0.65
SPTBN1-207ENST00000615901 XBP1P17861 261 aa10.97□□□□□ -0.65
SPTBN1-207ENST00000615901 IFT57Q9NWB7 429 aa10.97□□□□□ -0.65
SPTBN1-207ENST00000615901 CCDC61Q9Y6R9 512 aa10.97□□□□□ -0.65
SPTBN1-207ENST00000615901 LRRCC1Q9C099 1032 aa10.97□□□□□ -0.65
SPTBN1-207ENST00000615901 GNL3LQ9NVN8 582 aaKnown RBP10.97□□□□□ -0.65
SPTBN1-207ENST00000615901 SAMD9Q5K651 1589 aa10.97□□□□□ -0.65
SPTBN1-207ENST00000615901 ANKRD36BQ8N2N9 1353 aa10.97□□□□□ -0.65
SPTBN1-207ENST00000615901 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.97□□□□□ -0.65
SPTBN1-207ENST00000615901 IPO7O95373 1038 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms