RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 PSME1Q06323 249 aa10.63□□□□□ -0.71
MUC1-227ENST00000615517 APLP2Q06481 763 aa10.63□□□□□ -0.71
MUC1-227ENST00000615517 NBPF8Q3BBV2 869 aa10.63□□□□□ -0.71
MUC1-227ENST00000615517 NBPF14Q5TI25 921 aa10.63□□□□□ -0.71
MUC1-227ENST00000615517 LMOD2Q6P5Q4 547 aa10.63□□□□□ -0.71
MUC1-227ENST00000615517 FAM196AQ6ZSG2 479 aa10.63□□□□□ -0.71
MUC1-227ENST00000615517 STK26Q9P289 416 aa10.63□□□□□ -0.71
MUC1-227ENST00000615517 PHF8Q9UPP1 1060 aa10.63□□□□□ -0.71
MUC1-227ENST00000615517 ARHGEF10O15013 1369 aa10.63□□□□□ -0.71
MUC1-227ENST00000615517 SBF2Q86WG5 1849 aa10.63□□□□□ -0.71
MUC1-227ENST00000615517 RRBP1Q9P2E9 1410 aaKnown RBP10.61□□□□□ -0.71
MUC1-227ENST00000615517 SPATA31A1Q5TZJ5 1347 aa10.6□□□□□ -0.71
MUC1-227ENST00000615517 RPGRIP1LQ68CZ1 1315 aa10.6□□□□□ -0.71
MUC1-227ENST00000615517 RGPD3A6NKT7 1758 aaPredicted RBP10.6□□□□□ -0.71
MUC1-227ENST00000615517 RGPD4Q7Z3J3 1758 aa10.6□□□□□ -0.71
MUC1-227ENST00000615517 PDGFDQ9GZP0 370 aaPredicted RBP10.6□□□□□ -0.71
MUC1-227ENST00000615517 ABCC11Q96J66 1382 aa10.6□□□□□ -0.71
MUC1-227ENST00000615517 ADGRF5Q8IZF2 1346 aa10.59□□□□□ -0.71
MUC1-227ENST00000615517 TMEM132EQ6IEE7 984 aa10.58□□□□□ -0.72
MUC1-227ENST00000615517 PTGER2P43116 358 aa10.57□□□□□ -0.72
MUC1-227ENST00000615517 PMFBP1Q8TBY8 1022 aa10.57□□□□□ -0.72
MUC1-227ENST00000615517 ANO8Q9HCE9 1232 aaPredicted RBP10.57□□□□□ -0.72
MUC1-227ENST00000615517 PEAK1Q9H792 1746 aa10.56□□□□□ -0.72
MUC1-227ENST00000615517 PHRF1Q9P1Y6 1649 aaKnown RBP10.55□□□□□ -0.72
MUC1-227ENST00000615517 ZBTB7AO95365 584 aa10.55□□□□□ -0.72
MUC1-227ENST00000615517 SYT17Q9BSW7 474 aa10.55□□□□□ -0.72
MUC1-227ENST00000615517 YTHDC2Q9H6S0 1430 aaKnown RBP10.55□□□□□ -0.72
MUC1-227ENST00000615517 PARP4Q9UKK3 1724 aaKnown RBP10.55□□□□□ -0.72
MUC1-227ENST00000615517 FHDC1Q9C0D6 1143 aaPredicted RBP10.54□□□□□ -0.72
MUC1-227ENST00000615517 SHANK3Q9BYB0 1731 aa10.53□□□□□ -0.72
MUC1-227ENST00000615517 ITGAEP38570 1179 aa10.53□□□□□ -0.72
MUC1-227ENST00000615517 PDE3BQ13370 1112 aa10.53□□□□□ -0.72
MUC1-227ENST00000615517 CHRNA2Q15822 529 aa10.53□□□□□ -0.72
MUC1-227ENST00000615517 BARGINQ6ZT62 677 aa10.53□□□□□ -0.72
MUC1-227ENST00000615517 PRDM11Q9NQV5 511 aa10.53□□□□□ -0.72
MUC1-227ENST00000615517 STRN4Q9NRL3 753 aa10.53□□□□□ -0.72
MUC1-227ENST00000615517 USP35Q9P2H5 1018 aa10.53□□□□□ -0.72
MUC1-227ENST00000615517 ATF5Q9Y2D1 282 aaPredicted RBP10.53□□□□□ -0.72
MUC1-227ENST00000615517 GOLGB1Q14789 3259 aaKnown RBP10.53□□□□□ -0.72
MUC1-227ENST00000615517 KIAA0232Q92628 1395 aa10.52□□□□□ -0.72
MUC1-227ENST00000615517 GIGYF1O75420 1035 aaPredicted RBP10.52□□□□□ -0.73
MUC1-227ENST00000615517 SIRT1Q96EB6 747 aa10.52□□□□□ -0.73
MUC1-227ENST00000615517 DLC1Q96QB1 1528 aa10.52□□□□□ -0.73
MUC1-227ENST00000615517 PIK3C2GO75747 1445 aa10.51□□□□□ -0.73
MUC1-227ENST00000615517 ANKARQ7Z5J8 1434 aa10.51□□□□□ -0.73
MUC1-227ENST00000615517 PTF1AQ7RTS3 328 aa10.51□□□□□ -0.73
MUC1-227ENST00000615517 PROM2Q8N271 834 aa10.51□□□□□ -0.73
MUC1-227ENST00000615517 SGIP1Q9BQI5 828 aa10.51□□□□□ -0.73
MUC1-227ENST00000615517 SSH2Q76I76 1423 aa10.5□□□□□ -0.73
MUC1-227ENST00000615517 PLSCR1O15162 318 aa10.5□□□□□ -0.73
MUC1-227ENST00000615517 ACIN1Q9UKV3 1341 aaKnown RBP10.5□□□□□ -0.73
MUC1-227ENST00000615517 LMO7Q8WWI1 1683 aa10.5□□□□□ -0.73
MUC1-227ENST00000615517 SAFB2Q14151 953 aaKnown RBP eCLIP10.49□□□□□ -0.73
MUC1-227ENST00000615517 LARP1Q6PKG0 1096 aaKnown RBP10.49□□□□□ -0.73
MUC1-227ENST00000615517 PRR36Q9H6K5 1346 aa10.49□□□□□ -0.73
MUC1-227ENST00000615517 LRRC37A3O60309 1634 aa10.48□□□□□ -0.73
MUC1-227ENST00000615517 ZC3H6P61129 1189 aaKnown RBP10.48□□□□□ -0.73
MUC1-227ENST00000615517 PRAM1Q96QH2 718 aa10.48□□□□□ -0.73
MUC1-227ENST00000615517 GPRASP1Q5JY77 1395 aa10.48□□□□□ -0.73
MUC1-227ENST00000615517 SPATA31E1Q6ZUB1 1445 aa10.48□□□□□ -0.73
MUC1-227ENST00000615517 AKAP12Q02952 1782 aa10.47□□□□□ -0.73
MUC1-227ENST00000615517 WNK3Q9BYP7 1800 aa10.47□□□□□ -0.73
MUC1-227ENST00000615517 RGL3Q3MIN7 710 aa10.47□□□□□ -0.73
MUC1-227ENST00000615517 TCP11L2Q8N4U5 519 aa10.47□□□□□ -0.73
MUC1-227ENST00000615517 BCL11BQ9C0K0 894 aaPredicted RBP10.47□□□□□ -0.73
MUC1-227ENST00000615517 PAK3O75914 559 aaPredicted RBP10.46□□□□□ -0.73
MUC1-227ENST00000615517 ANKRD30BQ9BXX2 1392 aa10.46□□□□□ -0.74
MUC1-227ENST00000615517 OVOS2A0A0G2JMS6 1433 aa10.46□□□□□ -0.74
MUC1-227ENST00000615517 OVOS2A0A0J9YW53 1432 aa10.46□□□□□ -0.74
MUC1-227ENST00000615517 OVOS2Q6IE36 1432 aa10.46□□□□□ -0.74
MUC1-227ENST00000615517 ATP7BP35670 1465 aa10.45□□□□□ -0.74
MUC1-227ENST00000615517 DHX57Q6P158 1386 aaKnown RBP10.45□□□□□ -0.74
MUC1-227ENST00000615517 MAP3K5Q99683 1374 aa10.45□□□□□ -0.74
MUC1-227ENST00000615517 EVA1CP58658 441 aa10.45□□□□□ -0.74
MUC1-227ENST00000615517 MTFR1LQ9H019 292 aa10.45□□□□□ -0.74
MUC1-227ENST00000615517 C14orf93Q9H972 538 aaKnown RBP10.45□□□□□ -0.74
MUC1-227ENST00000615517 ITSN1Q15811 1721 aa10.44□□□□□ -0.74
MUC1-227ENST00000615517 COL24A1Q17RW2 1714 aa10.44□□□□□ -0.74
MUC1-227ENST00000615517 TULP4Q9NRJ4 1543 aa10.44□□□□□ -0.74
MUC1-227ENST00000615517 SLC15A2Q16348 729 aa10.44□□□□□ -0.74
MUC1-227ENST00000615517 NUTM2GQ5VZR2 741 aa10.44□□□□□ -0.74
MUC1-227ENST00000615517 ARXQ96QS3 562 aa10.44□□□□□ -0.74
MUC1-227ENST00000615517 HIRIP3Q9BW71 556 aaPredicted RBP10.44□□□□□ -0.74
MUC1-227ENST00000615517 C11orf95C9JLR9 678 aaPredicted RBP10.43□□□□□ -0.74
MUC1-227ENST00000615517 GPR162Q16538 588 aa10.43□□□□□ -0.74
MUC1-227ENST00000615517 CFAP70Q5T0N1 1121 aa10.43□□□□□ -0.74
MUC1-227ENST00000615517 STK32BQ9NY57 414 aa10.43□□□□□ -0.74
MUC1-227ENST00000615517 THRAP3Q9Y2W1 955 aaKnown RBP10.43□□□□□ -0.74
MUC1-227ENST00000615517 KAT6BQ8WYB5 2073 aa10.43□□□□□ -0.74
MUC1-227ENST00000615517 TXNRD1Q16881 649 aa10.42□□□□□ -0.74
MUC1-227ENST00000615517 NGDNQ8NEJ9 315 aaKnown RBP10.42□□□□□ -0.74
MUC1-227ENST00000615517 SLC4A1APQ9BWU0 796 aaKnown RBP10.42□□□□□ -0.74
MUC1-227ENST00000615517 PAPPAQ13219 1627 aa10.42□□□□□ -0.74
MUC1-227ENST00000615517 POGKQ9P215 609 aa10.41□□□□□ -0.74
MUC1-227ENST00000615517 COL5A2P05997 1499 aaPredicted RBP10.41□□□□□ -0.74
MUC1-227ENST00000615517 CPDO75976 1380 aa10.4□□□□□ -0.74
MUC1-227ENST00000615517 MINK1Q8N4C8 1332 aaPredicted RBP10.4□□□□□ -0.74
MUC1-227ENST00000615517 MARCH10Q8NA82 808 aaPredicted RBP10.4□□□□□ -0.74
MUC1-227ENST00000615517 TUBGCP6Q96RT7 1819 aa10.4□□□□□ -0.75
MUC1-227ENST00000615517 RGPD5Q99666 1765 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms