RNA–Protein interactions for RNA: ENST00000615229.4

ACACA-236, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 1 (best)

Gene ACACA, Length 1,468 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-236ENST00000615229 SSH2Q76I76 1423 aa30.06■■■□□ 2.4
ACACA-236ENST00000615229 MARF1Q9Y4F3 1742 aaKnown RBP30.05■■■□□ 2.4
ACACA-236ENST00000615229 SPATA31A3Q5VYP0 1347 aa30.05■■■□□ 2.4
ACACA-236ENST00000615229 KTN1Q86UP2 1357 aaKnown RBP30.05■■■□□ 2.4
ACACA-236ENST00000615229 CCDC7Q96M83 1385 aa30.05■■■□□ 2.4
ACACA-236ENST00000615229 JCADQ9P266 1359 aa30.05■■■□□ 2.4
ACACA-236ENST00000615229 LRRC59Q96AG4 307 aaKnown RBP30.05■■■□□ 2.4
ACACA-236ENST00000615229 WASHC2AQ641Q2 1341 aa30.04■■■□□ 2.4
ACACA-236ENST00000615229 ANKRD36BQ8N2N9 1353 aa30.03■■■□□ 2.4
ACACA-236ENST00000615229 KIF20BQ96Q89 1820 aa30.01■■■□□ 2.4
ACACA-236ENST00000615229 PAK3O75914 559 aaPredicted RBP30.01■■■□□ 2.4
ACACA-236ENST00000615229 HDGFL2Q7Z4V5 671 aaPredicted RBP30■■■□□ 2.39
ACACA-236ENST00000615229 PHRF1Q9P1Y6 1649 aaKnown RBP30■■■□□ 2.39
ACACA-236ENST00000615229 ZNF692Q9BU19 519 aaPredicted RBP29.99■■■□□ 2.39
ACACA-236ENST00000615229 TERF2IPQ9NYB0 399 aa29.99■■■□□ 2.39
ACACA-236ENST00000615229 MED1Q15648 1581 aaPredicted RBP29.98■■■□□ 2.39
ACACA-236ENST00000615229 EDC4Q6P2E9 1401 aaKnown RBP29.98■■■□□ 2.39
ACACA-236ENST00000615229 USP54Q70EL1 1684 aa29.97■■■□□ 2.39
ACACA-236ENST00000615229 BRD4O60885 1362 aaPredicted RBP29.97■■■□□ 2.39
ACACA-236ENST00000615229 LMOD2Q6P5Q4 547 aa29.97■■■□□ 2.39
ACACA-236ENST00000615229 TTC21BQ7Z4L5 1316 aa29.96■■■□□ 2.39
ACACA-236ENST00000615229 ARHGEF10O15013 1369 aa29.95■■■□□ 2.39
ACACA-236ENST00000615229 LRP6O75581 1613 aa29.95■■■□□ 2.39
ACACA-236ENST00000615229 NUTM2GQ5VZR2 741 aa29.93■■■□□ 2.38
ACACA-236ENST00000615229 PLEKHG5O94827 1062 aa29.92■■■□□ 2.38
ACACA-236ENST00000615229 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.92■■■□□ 2.38
ACACA-236ENST00000615229 NSD3Q9BZ95 1437 aa29.92■■■□□ 2.38
ACACA-236ENST00000615229 CARD14Q9BXL6 1004 aa29.91■■■□□ 2.38
ACACA-236ENST00000615229 TTC21AQ8NDW8 1320 aa29.89■■■□□ 2.38
ACACA-236ENST00000615229 ABTB2Q8N961 1025 aa29.89■■■□□ 2.38
ACACA-236ENST00000615229 CABLES1Q8TDN4 633 aa29.88■■■□□ 2.37
ACACA-236ENST00000615229 PANK3Q9H999 370 aa29.88■■■□□ 2.37
ACACA-236ENST00000615229 ANKRD26Q9UPS8 1709 aa29.88■■■□□ 2.37
ACACA-236ENST00000615229 SPATA31A6Q5VVP1 1343 aa29.88■■■□□ 2.37
ACACA-236ENST00000615229 NME9Q86XW9 330 aa29.87■■■□□ 2.37
ACACA-236ENST00000615229 ZRANB1Q9UGI0 708 aa29.87■■■□□ 2.37
ACACA-236ENST00000615229 NUTM2BA6NNL0 878 aaPredicted RBP29.86■■■□□ 2.37
ACACA-236ENST00000615229 NUTM2EB1AL46 878 aaPredicted RBP29.86■■■□□ 2.37
ACACA-236ENST00000615229 NUTM2AQ8IVF1 878 aaPredicted RBP29.86■■■□□ 2.37
ACACA-236ENST00000615229 SLIT3O75094 1523 aa29.85■■■□□ 2.37
ACACA-236ENST00000615229 USP19O94966 1318 aa29.82■■■□□ 2.36
ACACA-236ENST00000615229 OVOS2A0A0J9YW53 1432 aa29.82■■■□□ 2.36
ACACA-236ENST00000615229 OVOS2Q6IE36 1432 aa29.82■■■□□ 2.36
ACACA-236ENST00000615229 NLRP6P59044 892 aa29.81■■■□□ 2.36
ACACA-236ENST00000615229 USP31Q70CQ4 1352 aa29.8■■■□□ 2.36
ACACA-236ENST00000615229 LTN1O94822 1766 aa29.79■■■□□ 2.36
ACACA-236ENST00000615229 PLCH1Q4KWH8 1693 aa29.78■■■□□ 2.36
ACACA-236ENST00000615229 NLRP13Q86W25 1043 aa29.78■■■□□ 2.36
ACACA-236ENST00000615229 NFAT5O94916 1531 aa29.78■■■□□ 2.36
ACACA-236ENST00000615229 FYB1O15117 783 aa29.76■■■□□ 2.35
ACACA-236ENST00000615229 ADAMTS2O95450 1211 aa29.76■■■□□ 2.35
ACACA-236ENST00000615229 HAP1P54257 671 aaPredicted RBP29.74■■■□□ 2.35
ACACA-236ENST00000615229 GGNBP2Q9H3C7 697 aa29.74■■■□□ 2.35
ACACA-236ENST00000615229 RGPD5Q99666 1765 aa29.73■■■□□ 2.35
ACACA-236ENST00000615229 COL14A1Q05707 1796 aaKnown RBP29.72■■■□□ 2.35
ACACA-236ENST00000615229 CGNL1Q0VF96 1302 aa29.72■■■□□ 2.35
ACACA-236ENST00000615229 ZNF316A6NFI3 1004 aaPredicted RBP29.72■■■□□ 2.35
ACACA-236ENST00000615229 PER1O15534 1290 aaPredicted RBP29.71■■■□□ 2.35
ACACA-236ENST00000615229 SOX12O15370 315 aa29.7■■■□□ 2.35
ACACA-236ENST00000615229 GCP02774 474 aa29.7■■■□□ 2.35
ACACA-236ENST00000615229 MEX3CQ5U5Q3 659 aaKnown RBP29.7■■■□□ 2.35
ACACA-236ENST00000615229 MAP2P11137 1827 aaKnown RBP29.7■■■□□ 2.34
ACACA-236ENST00000615229 COL18A1P39060 1754 aa29.7■■■□□ 2.34
ACACA-236ENST00000615229 NWD2Q9ULI1 1742 aa29.69■■■□□ 2.34
ACACA-236ENST00000615229 NRAPQ86VF7 1730 aa29.68■■■□□ 2.34
ACACA-236ENST00000615229 KNSTRNQ9Y448 316 aa29.68■■■□□ 2.34
ACACA-236ENST00000615229 LMO7Q8WWI1 1683 aa29.68■■■□□ 2.34
ACACA-236ENST00000615229 KIAA0232Q92628 1395 aa29.68■■■□□ 2.34
ACACA-236ENST00000615229 ZC3H6P61129 1189 aaKnown RBP29.68■■■□□ 2.34
ACACA-236ENST00000615229 COG3Q96JB2 828 aa29.68■■■□□ 2.34
ACACA-236ENST00000615229 C8orf37Q96NL8 207 aa29.67■■■□□ 2.34
ACACA-236ENST00000615229 AMER1Q5JTC6 1135 aaPredicted RBP29.66■■■□□ 2.34
ACACA-236ENST00000615229 DDX10Q13206 875 aaKnown RBP29.65■■■□□ 2.34
ACACA-236ENST00000615229 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.65■■■□□ 2.34
ACACA-236ENST00000615229 CPDO75976 1380 aa29.63■■■□□ 2.33
ACACA-236ENST00000615229 NSD2O96028 1365 aa29.63■■■□□ 2.33
ACACA-236ENST00000615229 FBLN1P23142 703 aa29.62■■■□□ 2.33
ACACA-236ENST00000615229 FAM83GA6ND36 823 aa29.61■■■□□ 2.33
ACACA-236ENST00000615229 CHRNA2Q15822 529 aa29.61■■■□□ 2.33
ACACA-236ENST00000615229 KCNH5Q8NCM2 988 aa29.61■■■□□ 2.33
ACACA-236ENST00000615229 PEAK1Q9H792 1746 aa29.61■■■□□ 2.33
ACACA-236ENST00000615229 SLIT2O94813 1529 aa29.61■■■□□ 2.33
ACACA-236ENST00000615229 PRDM11Q9NQV5 511 aa29.61■■■□□ 2.33
ACACA-236ENST00000615229 ZBTB7CA1YPR0 619 aa29.59■■■□□ 2.33
ACACA-236ENST00000615229 NGLY1Q96IV0 654 aa29.59■■■□□ 2.33
ACACA-236ENST00000615229 AFF2P51816 1311 aa29.59■■■□□ 2.33
ACACA-236ENST00000615229 CAMTA1Q9Y6Y1 1673 aa29.58■■■□□ 2.33
ACACA-236ENST00000615229 ARHGEF25Q86VW2 580 aa29.57■■■□□ 2.32
ACACA-236ENST00000615229 CNGB1Q14028 1251 aaPredicted RBP29.56■■■□□ 2.32
ACACA-236ENST00000615229 CC2D1BQ5T0F9 858 aaKnown RBP29.56■■■□□ 2.32
ACACA-236ENST00000615229 NPC1L1Q9UHC9 1359 aa29.55■■■□□ 2.32
ACACA-236ENST00000615229 BCL9LQ86UU0 1499 aa29.55■■■□□ 2.32
ACACA-236ENST00000615229 ABCC6O95255 1503 aa29.54■■■□□ 2.32
ACACA-236ENST00000615229 FNBP4Q8N3X1 1017 aaPredicted RBP29.54■■■□□ 2.32
ACACA-236ENST00000615229 RGS17Q9UGC6 210 aaPredicted RBP29.54■■■□□ 2.32
ACACA-236ENST00000615229 TNNT2P45379 298 aaPredicted RBP29.53■■■□□ 2.32
ACACA-236ENST00000615229 RRS1Q15050 365 aaKnown RBP29.53■■■□□ 2.32
ACACA-236ENST00000615229 PHF23Q9BUL5 403 aaPredicted RBP29.53■■■□□ 2.32
ACACA-236ENST00000615229 AATKQ6ZMQ8 1374 aa29.52■■■□□ 2.32
ACACA-236ENST00000615229 MAP3K19Q56UN5 1328 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms