RNA–Protein interactions for RNA: ENST00000614640.4

MSRB3-212, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MSRB3, Length 4,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-212ENST00000614640 RARSP54136 660 aaKnown RBP11.8□□□□□ -0.52
MSRB3-212ENST00000614640 WDR63Q8IWG1 891 aa11.8□□□□□ -0.52
MSRB3-212ENST00000614640 COL3A1P02461 1466 aaPredicted RBP11.79□□□□□ -0.52
MSRB3-212ENST00000614640 VIRMAQ69YN4 1812 aaKnown RBP11.79□□□□□ -0.52
MSRB3-212ENST00000614640 FAM161AQ3B820 660 aa11.79□□□□□ -0.52
MSRB3-212ENST00000614640 ALKQ9UM73 1620 aa11.79□□□□□ -0.52
MSRB3-212ENST00000614640 LTKP29376 864 aa11.78□□□□□ -0.52
MSRB3-212ENST00000614640 COG6Q9Y2V7 657 aa11.78□□□□□ -0.52
MSRB3-212ENST00000614640 NEFMP07197 916 aa11.78□□□□□ -0.52
MSRB3-212ENST00000614640 TNNQ9UQP3 1299 aa11.78□□□□□ -0.52
MSRB3-212ENST00000614640 AMOTL2Q9Y2J4 779 aa11.78□□□□□ -0.52
MSRB3-212ENST00000614640 WASLO00401 505 aaPredicted RBP11.78□□□□□ -0.52
MSRB3-212ENST00000614640 RGS3P49796 1198 aa11.77□□□□□ -0.52
MSRB3-212ENST00000614640 CLUAP1Q96AJ1 413 aa11.77□□□□□ -0.52
MSRB3-212ENST00000614640 FER1L4A9Z1Z3 1794 aa11.77□□□□□ -0.53
MSRB3-212ENST00000614640 RLBP1P12271 317 aa11.77□□□□□ -0.53
MSRB3-212ENST00000614640 NCBP3Q53F19 620 aaKnown RBP11.77□□□□□ -0.53
MSRB3-212ENST00000614640 PLEKHF1Q96S99 279 aa11.76□□□□□ -0.53
MSRB3-212ENST00000614640 CABP1Q9NZU7 370 aa11.76□□□□□ -0.53
MSRB3-212ENST00000614640 LAS1LQ9Y4W2 734 aaKnown RBP11.76□□□□□ -0.53
MSRB3-212ENST00000614640 CCDC61Q9Y6R9 512 aa11.76□□□□□ -0.53
MSRB3-212ENST00000614640 U2AF1L5P0DN76 240 aaPredicted RBP11.76□□□□□ -0.53
MSRB3-212ENST00000614640 U2AF1Q01081 240 aaKnown RBP eCLIP11.76□□□□□ -0.53
MSRB3-212ENST00000614640 GGNBP2Q9H3C7 697 aa11.76□□□□□ -0.53
MSRB3-212ENST00000614640 FRAT1Q92837 279 aaPredicted RBP11.75□□□□□ -0.53
MSRB3-212ENST00000614640 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
MSRB3-212ENST00000614640 MED14O60244 1454 aa11.75□□□□□ -0.53
MSRB3-212ENST00000614640 FYB1O15117 783 aa11.75□□□□□ -0.53
MSRB3-212ENST00000614640 METP08581 1390 aa11.75□□□□□ -0.53
MSRB3-212ENST00000614640 SETD1AO15047 1707 aaKnown RBP11.75□□□□□ -0.53
MSRB3-212ENST00000614640 NUDT16Q96DE0 195 aaKnown RBP11.74□□□□□ -0.53
MSRB3-212ENST00000614640 BCL2L13Q9BXK5 485 aa11.74□□□□□ -0.53
MSRB3-212ENST00000614640 DDRGK1Q96HY6 314 aa11.74□□□□□ -0.53
MSRB3-212ENST00000614640 FAM135BQ49AJ0 1406 aa11.74□□□□□ -0.53
MSRB3-212ENST00000614640 CANXP27824 592 aaKnown RBP11.73□□□□□ -0.53
MSRB3-212ENST00000614640 PCDHB15Q9Y5E8 787 aa11.73□□□□□ -0.53
MSRB3-212ENST00000614640 KIF20BQ96Q89 1820 aa11.73□□□□□ -0.53
MSRB3-212ENST00000614640 NGDNQ8NEJ9 315 aaKnown RBP11.73□□□□□ -0.53
MSRB3-212ENST00000614640 SLC4A3P48751 1232 aa11.73□□□□□ -0.53
MSRB3-212ENST00000614640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.73□□□□□ -0.53
MSRB3-212ENST00000614640 DLC1Q96QB1 1528 aa11.72□□□□□ -0.53
MSRB3-212ENST00000614640 TRIM35Q9UPQ4 493 aa11.72□□□□□ -0.53
MSRB3-212ENST00000614640 PNNQ9H307 717 aaKnown RBP11.72□□□□□ -0.53
MSRB3-212ENST00000614640 USP19O94966 1318 aa11.72□□□□□ -0.53
MSRB3-212ENST00000614640 NUTM2FA1L443 756 aa11.72□□□□□ -0.53
MSRB3-212ENST00000614640 PNPLA6Q8IY17 1366 aa11.71□□□□□ -0.53
MSRB3-212ENST00000614640 RTL5Q5HYW3 569 aaPredicted RBP11.71□□□□□ -0.53
MSRB3-212ENST00000614640 TSR2Q969E8 191 aaKnown RBP11.71□□□□□ -0.53
MSRB3-212ENST00000614640 PIK3R4Q99570 1358 aa11.71□□□□□ -0.53
MSRB3-212ENST00000614640 COG3Q96JB2 828 aa11.71□□□□□ -0.54
MSRB3-212ENST00000614640 MYH16Q9H6N6 1097 aa11.71□□□□□ -0.54
MSRB3-212ENST00000614640 RIMS1Q86UR5 1692 aaKnown RBP11.71□□□□□ -0.54
MSRB3-212ENST00000614640 TMPOP42166 694 aaKnown RBP11.71□□□□□ -0.54
MSRB3-212ENST00000614640 C3P01024 1663 aa11.7□□□□□ -0.54
MSRB3-212ENST00000614640 PPM1GO15355 546 aaPredicted RBP11.7□□□□□ -0.54
MSRB3-212ENST00000614640 U2SURPO15042 1029 aaKnown RBP11.69□□□□□ -0.54
MSRB3-212ENST00000614640 SEC24BO95487 1268 aa11.69□□□□□ -0.54
MSRB3-212ENST00000614640 CDC42BPGQ6DT37 1551 aa11.69□□□□□ -0.54
MSRB3-212ENST00000614640 NRXN3Q9Y4C0 1643 aa11.69□□□□□ -0.54
MSRB3-212ENST00000614640 SLIT1O75093 1534 aa11.69□□□□□ -0.54
MSRB3-212ENST00000614640 AAMPQ13685 434 aa11.69□□□□□ -0.54
MSRB3-212ENST00000614640 USP35Q9P2H5 1018 aa11.69□□□□□ -0.54
MSRB3-212ENST00000614640 MAPK8IP3Q9UPT6 1336 aa11.68□□□□□ -0.54
MSRB3-212ENST00000614640 CEP170BQ9Y4F5 1589 aaPredicted RBP11.68□□□□□ -0.54
MSRB3-212ENST00000614640 UBR1Q8IWV7 1749 aa11.68□□□□□ -0.54
MSRB3-212ENST00000614640 ADAMTS13Q76LX8 1427 aa11.68□□□□□ -0.54
MSRB3-212ENST00000614640 EXOSC9Q06265 439 aaKnown RBP11.68□□□□□ -0.54
MSRB3-212ENST00000614640 ARHGAP23Q9P227 1491 aa11.68□□□□□ -0.54
MSRB3-212ENST00000614640 MVPQ14764 893 aaKnown RBP11.67□□□□□ -0.54
MSRB3-212ENST00000614640 PROSER2Q86WR7 435 aaPredicted RBP11.67□□□□□ -0.54
MSRB3-212ENST00000614640 PMFBP1Q8TBY8 1022 aa11.67□□□□□ -0.54
MSRB3-212ENST00000614640 LRRC7Q96NW7 1537 aa11.67□□□□□ -0.54
MSRB3-212ENST00000614640 PPIP5K1Q6PFW1 1433 aa11.67□□□□□ -0.54
MSRB3-212ENST00000614640 AEBP2Q6ZN18 517 aaPredicted RBP11.67□□□□□ -0.54
MSRB3-212ENST00000614640 TECPR2O15040 1411 aa11.67□□□□□ -0.54
MSRB3-212ENST00000614640 CT47B1P0C2W7 299 aaPredicted RBP11.66□□□□□ -0.54
MSRB3-212ENST00000614640 KCNA6P17658 529 aa11.66□□□□□ -0.54
MSRB3-212ENST00000614640 FBLN1P23142 703 aa11.66□□□□□ -0.54
MSRB3-212ENST00000614640 ROBO2Q9HCK4 1378 aa11.66□□□□□ -0.54
MSRB3-212ENST00000614640 MAP2P11137 1827 aaKnown RBP11.66□□□□□ -0.54
MSRB3-212ENST00000614640 ZKSCAN2Q63HK3 967 aa11.66□□□□□ -0.54
MSRB3-212ENST00000614640 ATP7BP35670 1465 aa11.66□□□□□ -0.54
MSRB3-212ENST00000614640 DIAPH1O60610 1272 aaKnown RBP11.66□□□□□ -0.54
MSRB3-212ENST00000614640 SSH1Q8WYL5 1049 aa11.66□□□□□ -0.54
MSRB3-212ENST00000614640 SETD1BQ9UPS6 1966 aaKnown RBP11.65□□□□□ -0.54
MSRB3-212ENST00000614640 PDZRN3Q9UPQ7 1066 aa11.65□□□□□ -0.54
MSRB3-212ENST00000614640 IL16Q14005 1332 aa11.65□□□□□ -0.54
MSRB3-212ENST00000614640 NPHP4O75161 1426 aaPredicted RBP11.65□□□□□ -0.54
MSRB3-212ENST00000614640 TRIM27P14373 513 aa11.65□□□□□ -0.54
MSRB3-212ENST00000614640 DZIP1LQ8IYY4 767 aaKnown RBP11.65□□□□□ -0.55
MSRB3-212ENST00000614640 DIP2AQ14689 1571 aa11.64□□□□□ -0.55
MSRB3-212ENST00000614640 RIPK4P57078 832 aa11.64□□□□□ -0.55
MSRB3-212ENST00000614640 POLKQ9UBT6 870 aa11.64□□□□□ -0.55
MSRB3-212ENST00000614640 NCKAP5LQ9HCH0 1330 aa11.64□□□□□ -0.55
MSRB3-212ENST00000614640 NFKBIBQ15653 356 aa11.64□□□□□ -0.55
MSRB3-212ENST00000614640 CPSF1Q10570 1443 aaKnown RBP11.63□□□□□ -0.55
MSRB3-212ENST00000614640 SMC4Q9NTJ3 1288 aa11.63□□□□□ -0.55
MSRB3-212ENST00000614640 RSPH6AQ9H0K4 717 aa11.63□□□□□ -0.55
MSRB3-212ENST00000614640 ATF3P18847 181 aa11.63□□□□□ -0.55
MSRB3-212ENST00000614640 PTCH1Q13635 1447 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms