RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 NUCB2P80303 420 aa14.46□□□□□ -0.09
CDH5-208ENST00000614547 AAMPQ13685 434 aa14.46□□□□□ -0.09
CDH5-208ENST00000614547 CHMP4BQ9H444 224 aaKnown RBP14.46□□□□□ -0.09
CDH5-208ENST00000614547 NINLQ9Y2I6 1382 aa14.46□□□□□ -0.1
CDH5-208ENST00000614547 DRC7Q8IY82 874 aa14.46□□□□□ -0.1
CDH5-208ENST00000614547 TRMT2AQ8IZ69 625 aaKnown RBP14.45□□□□□ -0.1
CDH5-208ENST00000614547 NECTIN2Q92692 538 aa14.45□□□□□ -0.1
CDH5-208ENST00000614547 ZNF830Q96NB3 372 aaPredicted RBP14.45□□□□□ -0.1
CDH5-208ENST00000614547 CIZ1Q9ULV3 898 aaPredicted RBP14.44□□□□□ -0.1
CDH5-208ENST00000614547 LRRIQ1Q96JM4 1722 aa14.44□□□□□ -0.1
CDH5-208ENST00000614547 PRIM1P49642 420 aaKnown RBP14.44□□□□□ -0.1
CDH5-208ENST00000614547 C16orf71Q8IYS4 520 aaPredicted RBP14.44□□□□□ -0.1
CDH5-208ENST00000614547 ANO2Q9NQ90 1003 aa14.44□□□□□ -0.1
CDH5-208ENST00000614547 PODXL2Q9NZ53 605 aa14.44□□□□□ -0.1
CDH5-208ENST00000614547 TSC1Q92574 1164 aa14.43□□□□□ -0.1
CDH5-208ENST00000614547 ISY1Q9ULR0 285 aaKnown RBP14.43□□□□□ -0.1
CDH5-208ENST00000614547 FAM135AQ9P2D6 1515 aa14.43□□□□□ -0.1
CDH5-208ENST00000614547 DTNBO60941 627 aa14.43□□□□□ -0.1
CDH5-208ENST00000614547 CEBPAP49715 358 aaPredicted RBP14.43□□□□□ -0.1
CDH5-208ENST00000614547 RAB3GAP1Q15042 981 aa14.43□□□□□ -0.1
CDH5-208ENST00000614547 ASXL1Q8IXJ9 1541 aa14.42□□□□□ -0.1
CDH5-208ENST00000614547 ZSCAN23Q3MJ62 389 aa14.42□□□□□ -0.1
CDH5-208ENST00000614547 HDGFL2Q7Z4V5 671 aaPredicted RBP14.42□□□□□ -0.1
CDH5-208ENST00000614547 ZGPATQ8N5A5 531 aaKnown RBP14.42□□□□□ -0.1
CDH5-208ENST00000614547 SYCP2Q9BX26 1530 aa14.42□□□□□ -0.1
CDH5-208ENST00000614547 EVC2Q86UK5 1308 aa14.42□□□□□ -0.1
CDH5-208ENST00000614547 DCTN1Q14203 1278 aa14.42□□□□□ -0.1
CDH5-208ENST00000614547 RBM33Q96EV2 1170 aaKnown RBP14.42□□□□□ -0.1
CDH5-208ENST00000614547 ARHGEF12Q9NZN5 1544 aa14.42□□□□□ -0.1
CDH5-208ENST00000614547 CHAF1AQ13111 956 aaPredicted RBP14.42□□□□□ -0.1
CDH5-208ENST00000614547 CCDC27Q2M243 656 aa14.42□□□□□ -0.1
CDH5-208ENST00000614547 CBX1P83916 185 aa14.41□□□□□ -0.1
CDH5-208ENST00000614547 PKP1Q13835 747 aa14.41□□□□□ -0.1
CDH5-208ENST00000614547 TSHZ3Q63HK5 1081 aa14.41□□□□□ -0.1
CDH5-208ENST00000614547 MCCP23508 829 aa14.41□□□□□ -0.1
CDH5-208ENST00000614547 INTS3Q68E01 1043 aaKnown RBP14.41□□□□□ -0.1
CDH5-208ENST00000614547 LARP6Q9BRS8 491 aaKnown RBP14.41□□□□□ -0.1
CDH5-208ENST00000614547 RBSNQ9H1K0 784 aa14.41□□□□□ -0.1
CDH5-208ENST00000614547 CCDC141Q6ZP82 1450 aa14.4□□□□□ -0.1
CDH5-208ENST00000614547 RABEP1Q15276 862 aa14.4□□□□□ -0.1
CDH5-208ENST00000614547 TERF2IPQ9NYB0 399 aa14.4□□□□□ -0.1
CDH5-208ENST00000614547 ASXL2Q76L83 1435 aa14.4□□□□□ -0.1
CDH5-208ENST00000614547 NUCB1Q02818 461 aa14.4□□□□□ -0.1
CDH5-208ENST00000614547 SPC24Q8NBT2 197 aa14.4□□□□□ -0.1
CDH5-208ENST00000614547 C14orf37Q86TY3 774 aa14.39□□□□□ -0.11
CDH5-208ENST00000614547 SYAP1Q96A49 352 aaPredicted RBP14.39□□□□□ -0.11
CDH5-208ENST00000614547 KLHL40Q2TBA0 621 aa14.39□□□□□ -0.11
CDH5-208ENST00000614547 UPF3BQ9BZI7 483 aaKnown RBP14.39□□□□□ -0.11
CDH5-208ENST00000614547 CD109Q6YHK3 1445 aa14.39□□□□□ -0.11
CDH5-208ENST00000614547 IGSF3O75054 1194 aa14.39□□□□□ -0.11
CDH5-208ENST00000614547 HDAC1Q13547 482 aaPredicted RBP14.39□□□□□ -0.11
CDH5-208ENST00000614547 SMC5Q8IY18 1101 aa14.39□□□□□ -0.11
CDH5-208ENST00000614547 CCDC39Q9UFE4 941 aa14.38□□□□□ -0.11
CDH5-208ENST00000614547 CSPP1Q1MSJ5 1256 aa14.38□□□□□ -0.11
CDH5-208ENST00000614547 TWISTNBQ3B726 338 aaPredicted RBP14.38□□□□□ -0.11
CDH5-208ENST00000614547 ATAD2Q6PL18 1390 aa14.38□□□□□ -0.11
CDH5-208ENST00000614547 KCNJ4P48050 445 aa14.38□□□□□ -0.11
CDH5-208ENST00000614547 GCC1Q96CN9 775 aa14.37□□□□□ -0.11
CDH5-208ENST00000614547 SCAF11Q99590 1463 aaKnown RBP14.37□□□□□ -0.11
CDH5-208ENST00000614547 OFD1O75665 1012 aa14.37□□□□□ -0.11
CDH5-208ENST00000614547 REC8O95072 547 aa14.37□□□□□ -0.11
CDH5-208ENST00000614547 BMP2KLQ5H9B9 411 aa14.37□□□□□ -0.11
CDH5-208ENST00000614547 PIK3C2GO75747 1445 aa14.37□□□□□ -0.11
CDH5-208ENST00000614547 C17orf53Q8N3J3 647 aaPredicted RBP14.37□□□□□ -0.11
CDH5-208ENST00000614547 ZBTB40Q9NUA8 1239 aa14.37□□□□□ -0.11
CDH5-208ENST00000614547 OS9Q13438 667 aaPredicted RBP14.36□□□□□ -0.11
CDH5-208ENST00000614547 OTUD7AQ8TE49 926 aaPredicted RBP14.36□□□□□ -0.11
CDH5-208ENST00000614547 TSPYL6Q8N831 410 aa14.36□□□□□ -0.11
CDH5-208ENST00000614547 ZNF592Q92610 1267 aa14.36□□□□□ -0.11
CDH5-208ENST00000614547 CFAP65Q6ZU64 1925 aaKnown RBP14.36□□□□□ -0.11
CDH5-208ENST00000614547 FANCAO15360 1455 aa14.36□□□□□ -0.11
CDH5-208ENST00000614547 GOLGA6L4A6NEF3 574 aa14.36□□□□□ -0.11
CDH5-208ENST00000614547 FIBPO43427 364 aa14.36□□□□□ -0.11
CDH5-208ENST00000614547 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.36□□□□□ -0.11
CDH5-208ENST00000614547 TSPY26PQ9H489 355 aa14.36□□□□□ -0.11
CDH5-208ENST00000614547 SPDYE4A6NLX3 237 aa14.35□□□□□ -0.11
CDH5-208ENST00000614547 CHD1O14646 1710 aa14.35□□□□□ -0.11
CDH5-208ENST00000614547 MAPK8IP2Q13387 824 aaPredicted RBP14.35□□□□□ -0.11
CDH5-208ENST00000614547 USP25Q9UHP3 1055 aa14.35□□□□□ -0.11
CDH5-208ENST00000614547 MAP4K4O95819 1239 aaPredicted RBP14.35□□□□□ -0.11
CDH5-208ENST00000614547 SNX21Q969T3 373 aa14.35□□□□□ -0.11
CDH5-208ENST00000614547 ZNF428Q96B54 188 aa14.34□□□□□ -0.11
CDH5-208ENST00000614547 ADGRL1O94910 1474 aa14.34□□□□□ -0.11
CDH5-208ENST00000614547 API5Q9BZZ5 524 aaKnown RBP14.34□□□□□ -0.11
CDH5-208ENST00000614547 FAM83GA6ND36 823 aa14.34□□□□□ -0.11
CDH5-208ENST00000614547 WDR7Q9Y4E6 1490 aa14.33□□□□□ -0.11
CDH5-208ENST00000614547 INSRP06213 1382 aa14.33□□□□□ -0.11
CDH5-208ENST00000614547 RBM25P49756 843 aaKnown RBP14.33□□□□□ -0.12
CDH5-208ENST00000614547 JARID2Q92833 1246 aaPredicted RBP14.33□□□□□ -0.12
CDH5-208ENST00000614547 MAP7D2Q96T17 732 aa14.33□□□□□ -0.12
CDH5-208ENST00000614547 TTC12Q9H892 705 aaPredicted RBP14.33□□□□□ -0.12
CDH5-208ENST00000614547 MIS18AQ9NYP9 233 aa14.33□□□□□ -0.12
CDH5-208ENST00000614547 EXOC6BQ9Y2D4 811 aa14.33□□□□□ -0.12
CDH5-208ENST00000614547 LMOD2Q6P5Q4 547 aa14.32□□□□□ -0.12
CDH5-208ENST00000614547 DDX54Q8TDD1 881 aaKnown RBP14.32□□□□□ -0.12
CDH5-208ENST00000614547 ADGRL2O95490 1459 aa14.32□□□□□ -0.12
CDH5-208ENST00000614547 ZNF771Q7L3S4 317 aaPredicted RBP14.32□□□□□ -0.12
CDH5-208ENST00000614547 CABP1Q9NZU7 370 aa14.32□□□□□ -0.12
CDH5-208ENST00000614547 VPS37CA5D8V6 355 aaPredicted RBP14.32□□□□□ -0.12
CDH5-208ENST00000614547 IDI1Q13907 227 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms