RNA–Protein interactions for RNA: ENST00000613953.4

TPI1-210, Transcript of triosephosphate isomerase 1, humanhuman

TSL 1 (best) BASIC

Gene TPI1, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPI1-210ENST00000613953 CENPJQ9HC77 1338 aaPredicted RBP34■■■■□ 3.03
TPI1-210ENST00000613953 POLR3AO14802 1390 aaPredicted RBP34■■■■□ 3.03
TPI1-210ENST00000613953 CRYBG1Q9Y4K1 1723 aa33.98■■■■□ 3.03
TPI1-210ENST00000613953 ACEP12821 1306 aa33.95■■■■□ 3.03
TPI1-210ENST00000613953 PLEKHG3A1L390 1219 aa33.95■■■■□ 3.02
TPI1-210ENST00000613953 COL14A1Q05707 1796 aaKnown RBP33.94■■■■□ 3.02
TPI1-210ENST00000613953 NEUROD1Q13562 356 aa33.94■■■■□ 3.02
TPI1-210ENST00000613953 CCDC9Q9Y3X0 531 aaKnown RBP33.93■■■■□ 3.02
TPI1-210ENST00000613953 NRAPQ86VF7 1730 aa33.93■■■■□ 3.02
TPI1-210ENST00000613953 TRPM1Q7Z4N2 1603 aa33.92■■■■□ 3.02
TPI1-210ENST00000613953 NBPF8Q3BBV2 869 aa33.92■■■■□ 3.02
TPI1-210ENST00000613953 BTG4Q9NY30 223 aa33.92■■■■□ 3.02
TPI1-210ENST00000613953 QRICH2Q9H0J4 1663 aa33.92■■■■□ 3.02
TPI1-210ENST00000613953 SRPK2P78362 688 aaKnown RBP33.91■■■■□ 3.02
TPI1-210ENST00000613953 ONECUT3O60422 494 aaPredicted RBP33.89■■■■□ 3.02
TPI1-210ENST00000613953 SEPT12Q8IYM1 358 aa33.89■■■■□ 3.02
TPI1-210ENST00000613953 PPIP5K1Q6PFW1 1433 aa33.88■■■■□ 3.01
TPI1-210ENST00000613953 CCDC125Q86Z20 511 aa33.87■■■■□ 3.01
TPI1-210ENST00000613953 CABP2Q9NPB3 220 aa33.87■■■■□ 3.01
TPI1-210ENST00000613953 PRDM11Q9NQV5 511 aa33.86■■■■□ 3.01
TPI1-210ENST00000613953 ROCK2O75116 1388 aaKnown RBP33.86■■■■□ 3.01
TPI1-210ENST00000613953 PHRF1Q9P1Y6 1649 aaKnown RBP33.86■■■■□ 3.01
TPI1-210ENST00000613953 BRWD3Q6RI45 1802 aa33.84■■■■□ 3.01
TPI1-210ENST00000613953 KIAA0232Q92628 1395 aa33.83■■■■□ 3.01
TPI1-210ENST00000613953 NUTM2GQ5VZR2 741 aa33.82■■■■□ 3.01
TPI1-210ENST00000613953 SRCAPQ6ZRS2 3230 aa33.79■■■■□ 3
TPI1-210ENST00000613953 ABTB2Q8N961 1025 aa33.79■■■■□ 3
TPI1-210ENST00000613953 BLMP54132 1417 aaPredicted RBP33.78■■■■□ 3
TPI1-210ENST00000613953 FAM98CQ17RN3 349 aaKnown RBP33.77■■■■□ 3
TPI1-210ENST00000613953 KRT27Q7Z3Y8 459 aa33.77■■■■□ 3
TPI1-210ENST00000613953 SPATA31A5Q5VU36 1347 aa33.77■■■■□ 3
TPI1-210ENST00000613953 EVC2Q86UK5 1308 aa33.77■■■■□ 3
TPI1-210ENST00000613953 SPATA31A7Q8IWB4 1347 aa33.77■■■■□ 3
TPI1-210ENST00000613953 BRD4O60885 1362 aaPredicted RBP33.77■■■■□ 3
TPI1-210ENST00000613953 NRKQ7Z2Y5 1582 aa33.76■■■■□ 3
TPI1-210ENST00000613953 USP19O94966 1318 aa33.75■■■□□ 2.99
TPI1-210ENST00000613953 A0A0G2JS52 829 aa33.75■■■□□ 2.99
TPI1-210ENST00000613953 ZC3H6P61129 1189 aaKnown RBP33.75■■■□□ 2.99
TPI1-210ENST00000613953 MYT1Q01538 1121 aa33.75■■■□□ 2.99
TPI1-210ENST00000613953 CHRNA2Q15822 529 aa33.75■■■□□ 2.99
TPI1-210ENST00000613953 CABP1Q9NZU7 370 aa33.75■■■□□ 2.99
TPI1-210ENST00000613953 USP6P35125 1406 aa33.72■■■□□ 2.99
TPI1-210ENST00000613953 CPDO75976 1380 aa33.7■■■□□ 2.99
TPI1-210ENST00000613953 NLRP13Q86W25 1043 aa33.69■■■□□ 2.98
TPI1-210ENST00000613953 THSD7AQ9UPZ6 1657 aa33.68■■■□□ 2.98
TPI1-210ENST00000613953 SPATA31A1Q5TZJ5 1347 aa33.67■■■□□ 2.98
TPI1-210ENST00000613953 STRN4Q9NRL3 753 aa33.66■■■□□ 2.98
TPI1-210ENST00000613953 TONSLQ96HA7 1378 aa33.66■■■□□ 2.98
TPI1-210ENST00000613953 SSH2Q76I76 1423 aa33.65■■■□□ 2.98
TPI1-210ENST00000613953 GCP02774 474 aa33.64■■■□□ 2.98
TPI1-210ENST00000613953 SF3B2Q13435 895 aaKnown RBP33.63■■■□□ 2.97
TPI1-210ENST00000613953 ZRANB1Q9UGI0 708 aa33.63■■■□□ 2.97
TPI1-210ENST00000613953 LMO7Q8WWI1 1683 aa33.63■■■□□ 2.97
TPI1-210ENST00000613953 TRIM26Q12899 539 aaPredicted RBP33.63■■■□□ 2.97
TPI1-210ENST00000613953 SBNO2Q9Y2G9 1366 aa33.62■■■□□ 2.97
TPI1-210ENST00000613953 CAMTA1Q9Y6Y1 1673 aa33.62■■■□□ 2.97
TPI1-210ENST00000613953 CARD11Q9BXL7 1154 aa33.61■■■□□ 2.97
TPI1-210ENST00000613953 DEFB132Q7Z7B7 95 aa33.6■■■□□ 2.97
TPI1-210ENST00000613953 SLIT3O75094 1523 aa33.59■■■□□ 2.97
TPI1-210ENST00000613953 EVA1CP58658 441 aa33.59■■■□□ 2.97
TPI1-210ENST00000613953 NLRP6P59044 892 aa33.59■■■□□ 2.97
TPI1-210ENST00000613953 PIK3C2AO00443 1686 aa33.58■■■□□ 2.97
TPI1-210ENST00000613953 ZNF692Q9BU19 519 aaPredicted RBP33.57■■■□□ 2.97
TPI1-210ENST00000613953 LARP1Q6PKG0 1096 aaKnown RBP33.55■■■□□ 2.96
TPI1-210ENST00000613953 CPSF1Q10570 1443 aaKnown RBP33.54■■■□□ 2.96
TPI1-210ENST00000613953 USP35Q9P2H5 1018 aa33.54■■■□□ 2.96
TPI1-210ENST00000613953 AKAP12Q02952 1782 aa33.54■■■□□ 2.96
TPI1-210ENST00000613953 FAM182BQ5T319 152 aa33.53■■■□□ 2.96
TPI1-210ENST00000613953 BARGINQ6ZT62 677 aa33.53■■■□□ 2.96
TPI1-210ENST00000613953 TTC21BQ7Z4L5 1316 aa33.53■■■□□ 2.96
TPI1-210ENST00000613953 COL5A2P05997 1499 aaPredicted RBP33.53■■■□□ 2.96
TPI1-210ENST00000613953 AATKQ6ZMQ8 1374 aa33.5■■■□□ 2.95
TPI1-210ENST00000613953 TTC21AQ8NDW8 1320 aa33.5■■■□□ 2.95
TPI1-210ENST00000613953 BAG6P46379 1132 aa33.49■■■□□ 2.95
TPI1-210ENST00000613953 TCP11L2Q8N4U5 519 aa33.49■■■□□ 2.95
TPI1-210ENST00000613953 KTN1Q86UP2 1357 aaKnown RBP33.48■■■□□ 2.95
TPI1-210ENST00000613953 RGPD1P0DJD0 1748 aa33.47■■■□□ 2.95
TPI1-210ENST00000613953 ZBTB7CA1YPR0 619 aa33.46■■■□□ 2.95
TPI1-210ENST00000613953 THRAP3Q9Y2W1 955 aaKnown RBP33.45■■■□□ 2.95
TPI1-210ENST00000613953 CRB1P82279 1406 aa33.43■■■□□ 2.94
TPI1-210ENST00000613953 MON2Q7Z3U7 1717 aa33.43■■■□□ 2.94
TPI1-210ENST00000613953 FAM196AQ6ZSG2 479 aa33.43■■■□□ 2.94
TPI1-210ENST00000613953 KCNH5Q8NCM2 988 aa33.43■■■□□ 2.94
TPI1-210ENST00000613953 DISP2A7MBM2 1401 aa33.41■■■□□ 2.94
TPI1-210ENST00000613953 CD163L1Q9NR16 1453 aa33.41■■■□□ 2.94
TPI1-210ENST00000613953 COL18A1P39060 1754 aa33.41■■■□□ 2.94
TPI1-210ENST00000613953 TNS1Q9HBL0 1735 aaKnown RBP33.4■■■□□ 2.94
TPI1-210ENST00000613953 PDE3BQ13370 1112 aa33.39■■■□□ 2.94
TPI1-210ENST00000613953 ARHGEF25Q86VW2 580 aa33.39■■■□□ 2.94
TPI1-210ENST00000613953 NFAT5O94916 1531 aa33.37■■■□□ 2.93
TPI1-210ENST00000613953 EN1Q05925 392 aaPredicted RBP33.37■■■□□ 2.93
TPI1-210ENST00000613953 TMC1Q8TDI8 760 aa33.37■■■□□ 2.93
TPI1-210ENST00000613953 AXIN2Q9Y2T1 843 aa33.37■■■□□ 2.93
TPI1-210ENST00000613953 PUS7Q96PZ0 661 aaKnown RBP33.36■■■□□ 2.93
TPI1-210ENST00000613953 PARP4Q9UKK3 1724 aaKnown RBP33.36■■■□□ 2.93
TPI1-210ENST00000613953 SOX12O15370 315 aa33.35■■■□□ 2.93
TPI1-210ENST00000613953 TRIM37O94972 964 aa33.34■■■□□ 2.93
TPI1-210ENST00000613953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.34■■■□□ 2.93
TPI1-210ENST00000613953 WDR17Q8IZU2 1322 aa33.34■■■□□ 2.93
TPI1-210ENST00000613953 USP31Q70CQ4 1352 aa33.34■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms