RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 POLR3GLQ9BT43 218 aa17.84■□□□□ 0.45
CCL4-201ENST00000613947 USP6P35125 1406 aa17.83■□□□□ 0.45
CCL4-201ENST00000613947 CD163L1Q9NR16 1453 aa17.83■□□□□ 0.45
CCL4-201ENST00000613947 NINLQ9Y2I6 1382 aa17.82■□□□□ 0.44
CCL4-201ENST00000613947 PLEKHG5O94827 1062 aa17.82■□□□□ 0.44
CCL4-201ENST00000613947 ARHGEF10O15013 1369 aa17.82■□□□□ 0.44
CCL4-201ENST00000613947 KTN1Q86UP2 1357 aaKnown RBP17.82■□□□□ 0.44
CCL4-201ENST00000613947 HDGFL2Q7Z4V5 671 aaPredicted RBP17.81■□□□□ 0.44
CCL4-201ENST00000613947 TERF2IPQ9NYB0 399 aa17.81■□□□□ 0.44
CCL4-201ENST00000613947 CABLES1Q8TDN4 633 aa17.81■□□□□ 0.44
CCL4-201ENST00000613947 A0A1W2PP64 1363 aa17.8■□□□□ 0.44
CCL4-201ENST00000613947 SSH2Q76I76 1423 aa17.8■□□□□ 0.44
CCL4-201ENST00000613947 NUTM2GQ5VZR2 741 aa17.8■□□□□ 0.44
CCL4-201ENST00000613947 ABTB2Q8N961 1025 aa17.8■□□□□ 0.44
CCL4-201ENST00000613947 ALS2Q96Q42 1657 aa17.8■□□□□ 0.44
CCL4-201ENST00000613947 BRD4O60885 1362 aaPredicted RBP17.8■□□□□ 0.44
CCL4-201ENST00000613947 AKAP12Q02952 1782 aa17.8■□□□□ 0.44
CCL4-201ENST00000613947 LRP6O75581 1613 aa17.79■□□□□ 0.44
CCL4-201ENST00000613947 COL22A1Q8NFW1 1626 aaPredicted RBP17.79■□□□□ 0.44
CCL4-201ENST00000613947 TTC21BQ7Z4L5 1316 aa17.78■□□□□ 0.44
CCL4-201ENST00000613947 MED1Q15648 1581 aaPredicted RBP17.78■□□□□ 0.44
CCL4-201ENST00000613947 ADAMTS2O95450 1211 aa17.77■□□□□ 0.44
CCL4-201ENST00000613947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.77■□□□□ 0.44
CCL4-201ENST00000613947 KIF7Q2M1P5 1343 aa17.77■□□□□ 0.44
CCL4-201ENST00000613947 ANKRD36BQ8N2N9 1353 aa17.77■□□□□ 0.44
CCL4-201ENST00000613947 MEX3CQ5U5Q3 659 aaKnown RBP17.76■□□□□ 0.43
CCL4-201ENST00000613947 MON2Q7Z3U7 1717 aa17.75■□□□□ 0.43
CCL4-201ENST00000613947 NLRP6P59044 892 aa17.75■□□□□ 0.43
CCL4-201ENST00000613947 MYOM1P52179 1685 aa17.75■□□□□ 0.43
CCL4-201ENST00000613947 TTC21AQ8NDW8 1320 aa17.74■□□□□ 0.43
CCL4-201ENST00000613947 ZNF316A6NFI3 1004 aaPredicted RBP17.74■□□□□ 0.43
CCL4-201ENST00000613947 HAP1P54257 671 aaPredicted RBP17.74■□□□□ 0.43
CCL4-201ENST00000613947 EDC4Q6P2E9 1401 aaKnown RBP17.74■□□□□ 0.43
CCL4-201ENST00000613947 NLRP13Q86W25 1043 aa17.74■□□□□ 0.43
CCL4-201ENST00000613947 NRKQ7Z2Y5 1582 aa17.73■□□□□ 0.43
CCL4-201ENST00000613947 WASHC2AQ641Q2 1341 aa17.73■□□□□ 0.43
CCL4-201ENST00000613947 CARD14Q9BXL6 1004 aa17.73■□□□□ 0.43
CCL4-201ENST00000613947 NME9Q86XW9 330 aa17.72■□□□□ 0.43
CCL4-201ENST00000613947 C8orf37Q96NL8 207 aa17.72■□□□□ 0.43
CCL4-201ENST00000613947 PIK3C2AO00443 1686 aa17.72■□□□□ 0.43
CCL4-201ENST00000613947 ZRANB1Q9UGI0 708 aa17.71■□□□□ 0.43
CCL4-201ENST00000613947 CCDC7Q96M83 1385 aa17.71■□□□□ 0.43
CCL4-201ENST00000613947 PHF23Q9BUL5 403 aaPredicted RBP17.71■□□□□ 0.43
CCL4-201ENST00000613947 USP19O94966 1318 aa17.7■□□□□ 0.42
CCL4-201ENST00000613947 PANK3Q9H999 370 aa17.7■□□□□ 0.42
CCL4-201ENST00000613947 NGLY1Q96IV0 654 aa17.69■□□□□ 0.42
CCL4-201ENST00000613947 ABCA3Q99758 1704 aa17.69■□□□□ 0.42
CCL4-201ENST00000613947 GCP02774 474 aa17.68■□□□□ 0.42
CCL4-201ENST00000613947 RGS17Q9UGC6 210 aaPredicted RBP17.68■□□□□ 0.42
CCL4-201ENST00000613947 CRYBG1Q9Y4K1 1723 aa17.68■□□□□ 0.42
CCL4-201ENST00000613947 ZC3H6P61129 1189 aaKnown RBP17.68■□□□□ 0.42
CCL4-201ENST00000613947 NSD3Q9BZ95 1437 aa17.67■□□□□ 0.42
CCL4-201ENST00000613947 USP31Q70CQ4 1352 aa17.67■□□□□ 0.42
CCL4-201ENST00000613947 FYB1O15117 783 aa17.67■□□□□ 0.42
CCL4-201ENST00000613947 FAM83GA6ND36 823 aa17.66■□□□□ 0.42
CCL4-201ENST00000613947 AFF2P51816 1311 aa17.66■□□□□ 0.42
CCL4-201ENST00000613947 PHRF1Q9P1Y6 1649 aaKnown RBP17.65■□□□□ 0.42
CCL4-201ENST00000613947 KIAA0232Q92628 1395 aa17.65■□□□□ 0.42
CCL4-201ENST00000613947 SOX12O15370 315 aa17.65■□□□□ 0.42
CCL4-201ENST00000613947 FNBP4Q8N3X1 1017 aaPredicted RBP17.65■□□□□ 0.42
CCL4-201ENST00000613947 GGNBP2Q9H3C7 697 aa17.65■□□□□ 0.42
CCL4-201ENST00000613947 MARF1Q9Y4F3 1742 aaKnown RBP17.65■□□□□ 0.42
CCL4-201ENST00000613947 PRDM11Q9NQV5 511 aa17.64■□□□□ 0.41
CCL4-201ENST00000613947 SLIT3O75094 1523 aa17.64■□□□□ 0.41
CCL4-201ENST00000613947 OVOS2A0A0J9YW53 1432 aa17.63■□□□□ 0.41
CCL4-201ENST00000613947 OVOS2Q6IE36 1432 aa17.63■□□□□ 0.41
CCL4-201ENST00000613947 CHRNA2Q15822 529 aa17.63■□□□□ 0.41
CCL4-201ENST00000613947 KCNH5Q8NCM2 988 aa17.63■□□□□ 0.41
CCL4-201ENST00000613947 COG3Q96JB2 828 aa17.63■□□□□ 0.41
CCL4-201ENST00000613947 USP21Q9UK80 565 aa17.62■□□□□ 0.41
CCL4-201ENST00000613947 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
CCL4-201ENST00000613947 ZNF772Q68DY9 489 aaPredicted RBP17.61■□□□□ 0.41
CCL4-201ENST00000613947 CPDO75976 1380 aa17.61■□□□□ 0.41
CCL4-201ENST00000613947 POTEAQ6S8J7 498 aa17.61■□□□□ 0.41
CCL4-201ENST00000613947 SLIT2O94813 1529 aa17.6■□□□□ 0.41
CCL4-201ENST00000613947 USP54Q70EL1 1684 aa17.6■□□□□ 0.41
CCL4-201ENST00000613947 ZBTB7CA1YPR0 619 aa17.6■□□□□ 0.41
CCL4-201ENST00000613947 BTG4Q9NY30 223 aa17.6■□□□□ 0.41
CCL4-201ENST00000613947 KNSTRNQ9Y448 316 aa17.6■□□□□ 0.41
CCL4-201ENST00000613947 BCL9LQ86UU0 1499 aa17.6■□□□□ 0.41
CCL4-201ENST00000613947 PER1O15534 1290 aaPredicted RBP17.59■□□□□ 0.41
CCL4-201ENST00000613947 FBLN1P23142 703 aa17.59■□□□□ 0.41
CCL4-201ENST00000613947 ARHGEF25Q86VW2 580 aa17.59■□□□□ 0.41
CCL4-201ENST00000613947 NFAT5O94916 1531 aa17.58■□□□□ 0.41
CCL4-201ENST00000613947 UNC5CLQ8IV45 518 aa17.58■□□□□ 0.41
CCL4-201ENST00000613947 QTRT2Q9H974 415 aaKnown RBP17.58■□□□□ 0.4
CCL4-201ENST00000613947 KIF20BQ96Q89 1820 aa17.57■□□□□ 0.4
CCL4-201ENST00000613947 COL14A1Q05707 1796 aaKnown RBP17.57■□□□□ 0.4
CCL4-201ENST00000613947 PLCH1Q4KWH8 1693 aa17.56■□□□□ 0.4
CCL4-201ENST00000613947 AMER1Q5JTC6 1135 aaPredicted RBP17.56■□□□□ 0.4
CCL4-201ENST00000613947 TRPC5Q9UL62 973 aaPredicted RBP17.55■□□□□ 0.4
CCL4-201ENST00000613947 AXIN2Q9Y2T1 843 aa17.55■□□□□ 0.4
CCL4-201ENST00000613947 AATKQ6ZMQ8 1374 aa17.54■□□□□ 0.4
CCL4-201ENST00000613947 CAMTA1Q9Y6Y1 1673 aa17.54■□□□□ 0.4
CCL4-201ENST00000613947 NWD2Q9ULI1 1742 aa17.54■□□□□ 0.4
CCL4-201ENST00000613947 RRS1Q15050 365 aaKnown RBP17.53■□□□□ 0.4
CCL4-201ENST00000613947 STRN4Q9NRL3 753 aa17.53■□□□□ 0.4
CCL4-201ENST00000613947 MAP3K19Q56UN5 1328 aa17.52■□□□□ 0.4
CCL4-201ENST00000613947 ATRNO75882 1429 aa17.52■□□□□ 0.4
CCL4-201ENST00000613947 LMO7Q8WWI1 1683 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms