RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 POTEB3A0JP26 581 aa12.31□□□□□ -0.44
CCL3-205ENST00000613928 SMAPO00193 183 aa12.31□□□□□ -0.44
CCL3-205ENST00000613928 POTEBQ6S5H4 581 aa12.31□□□□□ -0.44
CCL3-205ENST00000613928 TMEM134Q9H6X4 195 aa12.31□□□□□ -0.44
CCL3-205ENST00000613928 RRP7BPQ9NSQ0 103 aa12.31□□□□□ -0.44
CCL3-205ENST00000613928 VPS9D1Q9Y2B5 631 aa12.31□□□□□ -0.44
CCL3-205ENST00000613928 TK2O00142 265 aa12.3□□□□□ -0.44
CCL3-205ENST00000613928 SULF1Q8IWU6 871 aa12.3□□□□□ -0.44
CCL3-205ENST00000613928 ZNF777Q9ULD5 760 aaPredicted RBP12.3□□□□□ -0.44
CCL3-205ENST00000613928 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCL3-205ENST00000613928 ARAP3Q8WWN8 1544 aa12.3□□□□□ -0.44
CCL3-205ENST00000613928 ROCK1Q13464 1354 aa12.3□□□□□ -0.44
CCL3-205ENST00000613928 MADDQ8WXG6 1647 aa12.29□□□□□ -0.44
CCL3-205ENST00000613928 NBPF3Q9H094 633 aa12.29□□□□□ -0.44
CCL3-205ENST00000613928 TTC37Q6PGP7 1564 aa12.29□□□□□ -0.44
CCL3-205ENST00000613928 PREX2Q70Z35 1606 aa12.29□□□□□ -0.44
CCL3-205ENST00000613928 BCORL1Q5H9F3 1711 aa12.28□□□□□ -0.44
CCL3-205ENST00000613928 CDC42BPBQ9Y5S2 1711 aa12.28□□□□□ -0.44
CCL3-205ENST00000613928 BEGAINQ9BUH8 593 aa12.27□□□□□ -0.45
CCL3-205ENST00000613928 CROCC2H7BZ55 1655 aa12.26□□□□□ -0.45
CCL3-205ENST00000613928 LSM11P83369 360 aaKnown RBP eCLIP12.26□□□□□ -0.45
CCL3-205ENST00000613928 FAM98CQ17RN3 349 aaKnown RBP12.26□□□□□ -0.45
CCL3-205ENST00000613928 GOPCQ9HD26 462 aa12.26□□□□□ -0.45
CCL3-205ENST00000613928 SEPT9Q9UHD8 586 aaPredicted RBP12.26□□□□□ -0.45
CCL3-205ENST00000613928 SAMD9LQ8IVG5 1584 aa12.26□□□□□ -0.45
CCL3-205ENST00000613928 ABCA9Q8IUA7 1624 aa12.26□□□□□ -0.45
CCL3-205ENST00000613928 RIMS1Q86UR5 1692 aaKnown RBP12.26□□□□□ -0.45
CCL3-205ENST00000613928 LAPTM4BQ86VI4 370 aa12.25□□□□□ -0.45
CCL3-205ENST00000613928 ADGRL2O95490 1459 aa12.25□□□□□ -0.45
CCL3-205ENST00000613928 LMTK3Q96Q04 1460 aa12.25□□□□□ -0.45
CCL3-205ENST00000613928 FRMPD1Q5SYB0 1578 aa12.25□□□□□ -0.45
CCL3-205ENST00000613928 RAPGEF3O95398 923 aa12.24□□□□□ -0.45
CCL3-205ENST00000613928 ARHGEF5Q12774 1597 aa12.24□□□□□ -0.45
CCL3-205ENST00000613928 ADGBQ8N7X0 1667 aa12.24□□□□□ -0.45
CCL3-205ENST00000613928 RSPH6AQ9H0K4 717 aa12.24□□□□□ -0.45
CCL3-205ENST00000613928 MBD5Q9P267 1494 aa12.24□□□□□ -0.45
CCL3-205ENST00000613928 MYO5CQ9NQX4 1742 aa12.23□□□□□ -0.45
CCL3-205ENST00000613928 NCOA1Q15788 1441 aa12.23□□□□□ -0.45
CCL3-205ENST00000613928 ARID4BQ4LE39 1312 aaPredicted RBP12.23□□□□□ -0.45
CCL3-205ENST00000613928 HDGFP51858 240 aaKnown RBP12.23□□□□□ -0.45
CCL3-205ENST00000613928 SHANK2Q9UPX8 1470 aa12.22□□□□□ -0.45
CCL3-205ENST00000613928 DDX11L8A8MPP1 907 aa12.22□□□□□ -0.45
CCL3-205ENST00000613928 SLC4A3P48751 1232 aa12.22□□□□□ -0.45
CCL3-205ENST00000613928 HNRNPMP52272 730 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCL3-205ENST00000613928 RSPH4AQ5TD94 716 aa12.22□□□□□ -0.45
CCL3-205ENST00000613928 ADGRD1Q6QNK2 874 aa12.22□□□□□ -0.45
CCL3-205ENST00000613928 ARHGAP5Q13017 1502 aa12.21□□□□□ -0.45
CCL3-205ENST00000613928 PLCH2O75038 1416 aa12.21□□□□□ -0.45
CCL3-205ENST00000613928 BHMG1C9JSJ3 638 aaPredicted RBP12.21□□□□□ -0.45
CCL3-205ENST00000613928 CD46P15529 392 aa12.21□□□□□ -0.45
CCL3-205ENST00000613928 DIXDC1Q155Q3 683 aa12.21□□□□□ -0.45
CCL3-205ENST00000613928 SH3D19Q5HYK7 790 aa12.21□□□□□ -0.45
CCL3-205ENST00000613928 SIN3AQ96ST3 1273 aa12.21□□□□□ -0.45
CCL3-205ENST00000613928 DENND4BO75064 1496 aaPredicted RBP12.21□□□□□ -0.46
CCL3-205ENST00000613928 ARHGEF40Q8TER5 1519 aa12.2□□□□□ -0.46
CCL3-205ENST00000613928 C9orf84Q5VXU9 1444 aa12.2□□□□□ -0.46
CCL3-205ENST00000613928 ANKRD30AQ9BXX3 1397 aa12.19□□□□□ -0.46
CCL3-205ENST00000613928 SWT1Q5T5J6 900 aaKnown RBP12.19□□□□□ -0.46
CCL3-205ENST00000613928 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
CCL3-205ENST00000613928 CCDC141Q6ZP82 1450 aa12.19□□□□□ -0.46
CCL3-205ENST00000613928 NEO1Q92859 1461 aa12.19□□□□□ -0.46
CCL3-205ENST00000613928 SYCP2Q9BX26 1530 aa12.18□□□□□ -0.46
CCL3-205ENST00000613928 HSPA2P54652 639 aa12.18□□□□□ -0.46
CCL3-205ENST00000613928 RDH13Q8NBN7 331 aa12.18□□□□□ -0.46
CCL3-205ENST00000613928 TRIM52Q96A61 297 aa12.18□□□□□ -0.46
CCL3-205ENST00000613928 KIAA1107Q9UPP5 1409 aa12.18□□□□□ -0.46
CCL3-205ENST00000613928 ARHGEF12Q9NZN5 1544 aa12.17□□□□□ -0.46
CCL3-205ENST00000613928 PLEKHH2Q8IVE3 1493 aa12.17□□□□□ -0.46
CCL3-205ENST00000613928 ERICH6Q7L0X2 663 aa12.17□□□□□ -0.46
CCL3-205ENST00000613928 PCMTD1Q96MG8 357 aaPredicted RBP12.17□□□□□ -0.46
CCL3-205ENST00000613928 RICTORQ6R327 1708 aa12.17□□□□□ -0.46
CCL3-205ENST00000613928 ACIN1Q9UKV3 1341 aaKnown RBP12.16□□□□□ -0.46
CCL3-205ENST00000613928 TSPY4P0CV99 314 aa12.16□□□□□ -0.46
CCL3-205ENST00000613928 TSPY10P0CW01 314 aa12.16□□□□□ -0.46
CCL3-205ENST00000613928 EFCAB2Q5VUJ9 269 aa12.16□□□□□ -0.46
CCL3-205ENST00000613928 SLF2Q8IX21 1173 aa12.16□□□□□ -0.46
CCL3-205ENST00000613928 STAC3Q96MF2 364 aa12.16□□□□□ -0.46
CCL3-205ENST00000613928 MPHOSPH9Q99550 1183 aa12.16□□□□□ -0.46
CCL3-205ENST00000613928 MAST1Q9Y2H9 1570 aa12.16□□□□□ -0.46
CCL3-205ENST00000613928 SIGLEC1Q9BZZ2 1709 aa12.16□□□□□ -0.46
CCL3-205ENST00000613928 HRO43593 1189 aa12.15□□□□□ -0.46
CCL3-205ENST00000613928 NEUROD1Q13562 356 aa12.15□□□□□ -0.46
CCL3-205ENST00000613928 SKIV2LQ15477 1246 aaKnown RBP12.15□□□□□ -0.46
CCL3-205ENST00000613928 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
CCL3-205ENST00000613928 ZFRQ96KR1 1074 aaKnown RBP12.15□□□□□ -0.46
CCL3-205ENST00000613928 TBC1D2Q9BYX2 928 aa12.15□□□□□ -0.46
CCL3-205ENST00000613928 SAMD7Q7Z3H4 446 aa12.14□□□□□ -0.47
CCL3-205ENST00000613928 NUTM1Q86Y26 1132 aa12.14□□□□□ -0.47
CCL3-205ENST00000613928 ABCC1P33527 1531 aa12.14□□□□□ -0.47
CCL3-205ENST00000613928 ANKRD50Q9ULJ7 1429 aa12.13□□□□□ -0.47
CCL3-205ENST00000613928 FER1L4A9Z1Z3 1794 aa12.13□□□□□ -0.47
CCL3-205ENST00000613928 MYSM1Q5VVJ2 828 aa12.13□□□□□ -0.47
CCL3-205ENST00000613928 TIMELESSQ9UNS1 1208 aa12.13□□□□□ -0.47
CCL3-205ENST00000613928 PZPP20742 1482 aa12.13□□□□□ -0.47
CCL3-205ENST00000613928 SPIRE2Q8WWL2 714 aa12.12□□□□□ -0.47
CCL3-205ENST00000613928 KIF15Q9NS87 1388 aa12.12□□□□□ -0.47
CCL3-205ENST00000613928 TRAPPC8Q9Y2L5 1435 aa12.11□□□□□ -0.47
CCL3-205ENST00000613928 CFAP74Q9C0B2 1584 aa12.11□□□□□ -0.47
CCL3-205ENST00000613928 FANCAO15360 1455 aa12.11□□□□□ -0.47
CCL3-205ENST00000613928 NECTIN2Q92692 538 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms