RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 SBNO1A3KN83 1393 aa11.53□□□□□ -0.56
PSMB3-208ENST00000613870 CDK12Q9NYV4 1490 aaPredicted RBP11.52□□□□□ -0.56
PSMB3-208ENST00000613870 ANP32CO43423 234 aa11.52□□□□□ -0.57
PSMB3-208ENST00000613870 CDK19Q9BWU1 502 aa11.52□□□□□ -0.57
PSMB3-208ENST00000613870 CABP2Q9NPB3 220 aa11.52□□□□□ -0.57
PSMB3-208ENST00000613870 TRPM3Q9HCF6 1732 aaPredicted RBP11.52□□□□□ -0.57
PSMB3-208ENST00000613870 BCL9LQ86UU0 1499 aa11.51□□□□□ -0.57
PSMB3-208ENST00000613870 CABLES1Q8TDN4 633 aa11.51□□□□□ -0.57
PSMB3-208ENST00000613870 NUDT16Q96DE0 195 aaKnown RBP11.51□□□□□ -0.57
PSMB3-208ENST00000613870 SBNO2Q9Y2G9 1366 aa11.51□□□□□ -0.57
PSMB3-208ENST00000613870 ATP7BP35670 1465 aa11.51□□□□□ -0.57
PSMB3-208ENST00000613870 ITSN1Q15811 1721 aa11.5□□□□□ -0.57
PSMB3-208ENST00000613870 LMOD2Q6P5Q4 547 aa11.5□□□□□ -0.57
PSMB3-208ENST00000613870 TRPC5Q9UL62 973 aaPredicted RBP11.5□□□□□ -0.57
PSMB3-208ENST00000613870 RGS12O14924 1447 aa11.5□□□□□ -0.57
PSMB3-208ENST00000613870 ATRNO75882 1429 aa11.5□□□□□ -0.57
PSMB3-208ENST00000613870 ALS2Q96Q42 1657 aa11.49□□□□□ -0.57
PSMB3-208ENST00000613870 ABCA3Q99758 1704 aa11.49□□□□□ -0.57
PSMB3-208ENST00000613870 PLEKHG5O94827 1062 aa11.49□□□□□ -0.57
PSMB3-208ENST00000613870 MIER1Q8N108 512 aa11.49□□□□□ -0.57
PSMB3-208ENST00000613870 UPF1Q92900 1129 aaKnown RBP eCLIP11.49□□□□□ -0.57
PSMB3-208ENST00000613870 PANK3Q9H999 370 aa11.49□□□□□ -0.57
PSMB3-208ENST00000613870 SLIT2O94813 1529 aa11.49□□□□□ -0.57
PSMB3-208ENST00000613870 NGDNQ8NEJ9 315 aaKnown RBP11.48□□□□□ -0.57
PSMB3-208ENST00000613870 ARHGEF10O15013 1369 aa11.48□□□□□ -0.57
PSMB3-208ENST00000613870 TOPAZ1Q8N9V7 1692 aa11.48□□□□□ -0.57
PSMB3-208ENST00000613870 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.48□□□□□ -0.57
PSMB3-208ENST00000613870 CCDC61Q9Y6R9 512 aa11.47□□□□□ -0.57
PSMB3-208ENST00000613870 HAP1P54257 671 aaPredicted RBP11.46□□□□□ -0.57
PSMB3-208ENST00000613870 UNC5CLQ8IV45 518 aa11.46□□□□□ -0.57
PSMB3-208ENST00000613870 KNSTRNQ9Y448 316 aa11.46□□□□□ -0.57
PSMB3-208ENST00000613870 CRYBG1Q9Y4K1 1723 aa11.46□□□□□ -0.58
PSMB3-208ENST00000613870 EP400Q96L91 3159 aa11.45□□□□□ -0.58
PSMB3-208ENST00000613870 ATAD2Q6PL18 1390 aa11.45□□□□□ -0.58
PSMB3-208ENST00000613870 ACEP12821 1306 aa11.45□□□□□ -0.58
PSMB3-208ENST00000613870 PLEKHG3A1L390 1219 aa11.45□□□□□ -0.58
PSMB3-208ENST00000613870 FAM83GA6ND36 823 aa11.45□□□□□ -0.58
PSMB3-208ENST00000613870 PAK3O75914 559 aaPredicted RBP11.45□□□□□ -0.58
PSMB3-208ENST00000613870 GJD4Q96KN9 370 aaPredicted RBP11.45□□□□□ -0.58
PSMB3-208ENST00000613870 PUS7Q96PZ0 661 aaKnown RBP11.45□□□□□ -0.58
PSMB3-208ENST00000613870 SLC12A5Q9H2X9 1139 aa11.45□□□□□ -0.58
PSMB3-208ENST00000613870 PLCH1Q4KWH8 1693 aa11.45□□□□□ -0.58
PSMB3-208ENST00000613870 POLR3AO14802 1390 aaPredicted RBP11.44□□□□□ -0.58
PSMB3-208ENST00000613870 NWD2Q9ULI1 1742 aa11.44□□□□□ -0.58
PSMB3-208ENST00000613870 HDGFL2Q7Z4V5 671 aaPredicted RBP11.44□□□□□ -0.58
PSMB3-208ENST00000613870 TERF2IPQ9NYB0 399 aa11.44□□□□□ -0.58
PSMB3-208ENST00000613870 GLI3P10071 1580 aa11.44□□□□□ -0.58
PSMB3-208ENST00000613870 CABP1Q9NZU7 370 aa11.43□□□□□ -0.58
PSMB3-208ENST00000613870 VPS72Q15906 364 aa11.42□□□□□ -0.58
PSMB3-208ENST00000613870 CC2D1BQ5T0F9 858 aaKnown RBP11.42□□□□□ -0.58
PSMB3-208ENST00000613870 PPIP5K1Q6PFW1 1433 aa11.42□□□□□ -0.58
PSMB3-208ENST00000613870 PHRF1Q9P1Y6 1649 aaKnown RBP11.41□□□□□ -0.58
PSMB3-208ENST00000613870 COL14A1Q05707 1796 aaKnown RBP11.41□□□□□ -0.58
PSMB3-208ENST00000613870 KTN1Q86UP2 1357 aaKnown RBP11.41□□□□□ -0.58
PSMB3-208ENST00000613870 NINLQ9Y2I6 1382 aa11.41□□□□□ -0.58
PSMB3-208ENST00000613870 NRAPQ86VF7 1730 aa11.4□□□□□ -0.58
PSMB3-208ENST00000613870 BRWD3Q6RI45 1802 aa11.4□□□□□ -0.58
PSMB3-208ENST00000613870 NUTM2GQ5VZR2 741 aa11.4□□□□□ -0.58
PSMB3-208ENST00000613870 BTG4Q9NY30 223 aa11.4□□□□□ -0.58
PSMB3-208ENST00000613870 ONECUT3O60422 494 aaPredicted RBP11.39□□□□□ -0.59
PSMB3-208ENST00000613870 NSD3Q9BZ95 1437 aa11.38□□□□□ -0.59
PSMB3-208ENST00000613870 ABTB2Q8N961 1025 aa11.38□□□□□ -0.59
PSMB3-208ENST00000613870 CARD14Q9BXL6 1004 aa11.38□□□□□ -0.59
PSMB3-208ENST00000613870 PRKRIP1Q9H875 184 aaPredicted RBP11.38□□□□□ -0.59
PSMB3-208ENST00000613870 ANKRD36BQ8N2N9 1353 aa11.38□□□□□ -0.59
PSMB3-208ENST00000613870 MYOM1P52179 1685 aa11.37□□□□□ -0.59
PSMB3-208ENST00000613870 PER1O15534 1290 aaPredicted RBP11.37□□□□□ -0.59
PSMB3-208ENST00000613870 ZC3H6P61129 1189 aaKnown RBP11.37□□□□□ -0.59
PSMB3-208ENST00000613870 RALBP1Q15311 655 aa11.37□□□□□ -0.59
PSMB3-208ENST00000613870 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
PSMB3-208ENST00000613870 CCDC9Q9Y3X0 531 aaKnown RBP11.37□□□□□ -0.59
PSMB3-208ENST00000613870 KIAA0232Q92628 1395 aa11.37□□□□□ -0.59
PSMB3-208ENST00000613870 CGNL1Q0VF96 1302 aa11.36□□□□□ -0.59
PSMB3-208ENST00000613870 USP6P35125 1406 aa11.36□□□□□ -0.59
PSMB3-208ENST00000613870 CHRNA2Q15822 529 aa11.36□□□□□ -0.59
PSMB3-208ENST00000613870 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.36□□□□□ -0.59
PSMB3-208ENST00000613870 PRDM11Q9NQV5 511 aa11.36□□□□□ -0.59
PSMB3-208ENST00000613870 A0A1W2PP64 1363 aa11.36□□□□□ -0.59
PSMB3-208ENST00000613870 BRD4O60885 1362 aaPredicted RBP11.36□□□□□ -0.59
PSMB3-208ENST00000613870 NRKQ7Z2Y5 1582 aa11.36□□□□□ -0.59
PSMB3-208ENST00000613870 USP19O94966 1318 aa11.35□□□□□ -0.59
PSMB3-208ENST00000613870 SSH2Q76I76 1423 aa11.35□□□□□ -0.59
PSMB3-208ENST00000613870 MORC1Q86VD1 984 aa11.35□□□□□ -0.59
PSMB3-208ENST00000613870 NLRP13Q86W25 1043 aa11.35□□□□□ -0.59
PSMB3-208ENST00000613870 ZNF692Q9BU19 519 aaPredicted RBP11.35□□□□□ -0.59
PSMB3-208ENST00000613870 AKAP12Q02952 1782 aa11.35□□□□□ -0.59
PSMB3-208ENST00000613870 CCER2I3L3R5 266 aa11.34□□□□□ -0.59
PSMB3-208ENST00000613870 GCP02774 474 aa11.34□□□□□ -0.59
PSMB3-208ENST00000613870 TNNT2P45379 298 aaPredicted RBP11.34□□□□□ -0.59
PSMB3-208ENST00000613870 FAM98CQ17RN3 349 aaKnown RBP11.34□□□□□ -0.59
PSMB3-208ENST00000613870 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
PSMB3-208ENST00000613870 SPATA31A5Q5VU36 1347 aa11.34□□□□□ -0.59
PSMB3-208ENST00000613870 SPATA31A7Q8IWB4 1347 aa11.34□□□□□ -0.59
PSMB3-208ENST00000613870 YTHDC1Q96MU7 727 aaKnown RBP11.33□□□□□ -0.6
PSMB3-208ENST00000613870 MRS2Q9HD23 443 aa11.33□□□□□ -0.6
PSMB3-208ENST00000613870 CPSF1Q10570 1443 aaKnown RBP11.33□□□□□ -0.6
PSMB3-208ENST00000613870 PIK3C2AO00443 1686 aa11.33□□□□□ -0.6
PSMB3-208ENST00000613870 CAMTA1Q9Y6Y1 1673 aa11.33□□□□□ -0.6
PSMB3-208ENST00000613870 MYBBP1AQ9BQG0 1328 aaKnown RBP11.33□□□□□ -0.6
PSMB3-208ENST00000613870 CPDO75976 1380 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms