RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 INCENPQ9NQS7 918 aa8.21□□□□□ -1.1
CLCN3-211ENST00000613795 RPGRIP1LQ68CZ1 1315 aa8.21□□□□□ -1.1
CLCN3-211ENST00000613795 BRD2P25440 801 aaKnown RBP8.21□□□□□ -1.1
CLCN3-211ENST00000613795 PDE3AQ14432 1141 aa8.21□□□□□ -1.1
CLCN3-211ENST00000613795 TMCO3Q6UWJ1 677 aa8.21□□□□□ -1.1
CLCN3-211ENST00000613795 DDX11Q96FC9 970 aa8.21□□□□□ -1.1
CLCN3-211ENST00000613795 RAD54L2Q9Y4B4 1467 aa8.21□□□□□ -1.1
CLCN3-211ENST00000613795 TRIM29Q14134 588 aa8.2□□□□□ -1.1
CLCN3-211ENST00000613795 PPP4R3BQ5MIZ7 849 aa8.2□□□□□ -1.1
CLCN3-211ENST00000613795 RILPL2Q969X0 211 aa8.2□□□□□ -1.1
CLCN3-211ENST00000613795 SUPT6HQ7KZ85 1726 aaKnown RBP8.2□□□□□ -1.1
CLCN3-211ENST00000613795 MARCH6O60337 910 aa8.2□□□□□ -1.1
CLCN3-211ENST00000613795 CREBRFQ8IUR6 639 aa8.2□□□□□ -1.1
CLCN3-211ENST00000613795 DNMBPQ6XZF7 1577 aa8.2□□□□□ -1.1
CLCN3-211ENST00000613795 AXDND1Q5T1B0 1012 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-211ENST00000613795 RUSC2Q8N2Y8 1516 aa8.2□□□□□ -1.1
CLCN3-211ENST00000613795 CT47B1P0C2W7 299 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-211ENST00000613795 GTF2A1P52655 376 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-211ENST00000613795 GBP3Q9H0R5 595 aa8.19□□□□□ -1.1
CLCN3-211ENST00000613795 AKNAQ7Z591 1439 aa8.19□□□□□ -1.1
CLCN3-211ENST00000613795 CCDC94Q9BW85 323 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-211ENST00000613795 DAPK1P53355 1430 aa8.19□□□□□ -1.1
CLCN3-211ENST00000613795 VPS37CA5D8V6 355 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-211ENST00000613795 PES1O00541 588 aaKnown RBP8.19□□□□□ -1.1
CLCN3-211ENST00000613795 MYO6Q9UM54 1294 aa8.19□□□□□ -1.1
CLCN3-211ENST00000613795 PSME1Q06323 249 aa8.19□□□□□ -1.1
CLCN3-211ENST00000613795 OLFM4Q6UX06 510 aa8.19□□□□□ -1.1
CLCN3-211ENST00000613795 KIF20AO95235 890 aa8.19□□□□□ -1.1
CLCN3-211ENST00000613795 IFIT2P09913 472 aaKnown RBP8.19□□□□□ -1.1
CLCN3-211ENST00000613795 C9orf78Q9NZ63 289 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-211ENST00000613795 CUL7Q14999 1698 aa8.19□□□□□ -1.1
CLCN3-211ENST00000613795 MAPK8IP2Q13387 824 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-211ENST00000613795 FILIP1Q7Z7B0 1213 aa8.18□□□□□ -1.1
CLCN3-211ENST00000613795 TXLNBQ8N3L3 684 aa8.18□□□□□ -1.1
CLCN3-211ENST00000613795 TRIM34Q9BYJ4 488 aa8.18□□□□□ -1.1
CLCN3-211ENST00000613795 G3BP1Q13283 466 aaKnown RBP eCLIP8.18□□□□□ -1.1
CLCN3-211ENST00000613795 CAGE1Q8TC20 777 aa8.18□□□□□ -1.1
CLCN3-211ENST00000613795 WDR33Q9C0J8 1336 aaKnown RBP8.18□□□□□ -1.1
CLCN3-211ENST00000613795 HIP1O00291 1037 aa8.18□□□□□ -1.1
CLCN3-211ENST00000613795 GAS2L2Q8NHY3 880 aa8.18□□□□□ -1.1
CLCN3-211ENST00000613795 UBXN4Q92575 508 aa8.18□□□□□ -1.1
CLCN3-211ENST00000613795 PDCP20941 246 aa8.18□□□□□ -1.1
CLCN3-211ENST00000613795 SPC24Q8NBT2 197 aa8.18□□□□□ -1.1
CLCN3-211ENST00000613795 ANO2Q9NQ90 1003 aa8.18□□□□□ -1.1
CLCN3-211ENST00000613795 GPRASP1Q5JY77 1395 aa8.17□□□□□ -1.1
CLCN3-211ENST00000613795 PDZRN3Q9UPQ7 1066 aa8.17□□□□□ -1.1
CLCN3-211ENST00000613795 POGZQ7Z3K3 1410 aa8.17□□□□□ -1.1
CLCN3-211ENST00000613795 RIPK4P57078 832 aa8.17□□□□□ -1.1
CLCN3-211ENST00000613795 TRDNQ13061 729 aa8.17□□□□□ -1.1
CLCN3-211ENST00000613795 SMARCE1Q969G3 411 aa8.17□□□□□ -1.1
CLCN3-211ENST00000613795 SHTN1A0MZ66 631 aa8.17□□□□□ -1.1
CLCN3-211ENST00000613795 XPCQ01831 940 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-211ENST00000613795 HS1BP3Q53T59 392 aa8.17□□□□□ -1.1
CLCN3-211ENST00000613795 GPATCH11Q8N954 259 aa8.17□□□□□ -1.1
CLCN3-211ENST00000613795 PNISRQ8TF01 805 aaKnown RBP8.17□□□□□ -1.1
CLCN3-211ENST00000613795 KIAA1107Q9UPP5 1409 aa8.17□□□□□ -1.1
CLCN3-211ENST00000613795 ATF3P18847 181 aa8.17□□□□□ -1.1
CLCN3-211ENST00000613795 TROQ12816 1431 aaPredicted RBP8.17□□□□□ -1.1
CLCN3-211ENST00000613795 ERICH2A1L162 156 aa8.16□□□□□ -1.1
CLCN3-211ENST00000613795 APAF1O14727 1248 aa8.16□□□□□ -1.1
CLCN3-211ENST00000613795 LTV1Q96GA3 475 aaPredicted RBP8.16□□□□□ -1.1
CLCN3-211ENST00000613795 TOMM22Q9NS69 142 aa8.16□□□□□ -1.1
CLCN3-211ENST00000613795 MINK1Q8N4C8 1332 aaPredicted RBP8.16□□□□□ -1.1
CLCN3-211ENST00000613795 BMS1Q14692 1282 aaKnown RBP8.16□□□□□ -1.1
CLCN3-211ENST00000613795 KRT222Q8N1A0 295 aa8.16□□□□□ -1.1
CLCN3-211ENST00000613795 DYDC1Q8WWB3 177 aa8.16□□□□□ -1.1
CLCN3-211ENST00000613795 BCL2L13Q9BXK5 485 aa8.16□□□□□ -1.1
CLCN3-211ENST00000613795 AQRO60306 1485 aaKnown RBP eCLIP8.16□□□□□ -1.1
CLCN3-211ENST00000613795 GOLGA6L10A6NI86 522 aa8.16□□□□□ -1.1
CLCN3-211ENST00000613795 ZNF692Q9BU19 519 aaPredicted RBP8.16□□□□□ -1.1
CLCN3-211ENST00000613795 SMC2O95347 1197 aa8.16□□□□□ -1.1
CLCN3-211ENST00000613795 LNPKQ9C0E8 428 aa8.16□□□□□ -1.1
CLCN3-211ENST00000613795 KINO60870 393 aaKnown RBP8.15□□□□□ -1.1
CLCN3-211ENST00000613795 PSMA5P28066 241 aa8.15□□□□□ -1.1
CLCN3-211ENST00000613795 TERF1P54274 439 aa8.15□□□□□ -1.1
CLCN3-211ENST00000613795 ERC1Q8IUD2 1116 aa8.15□□□□□ -1.1
CLCN3-211ENST00000613795 RAPGEF4Q8WZA2 1011 aa8.15□□□□□ -1.1
CLCN3-211ENST00000613795 PRG4Q92954 1404 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-211ENST00000613795 CBFA2T2O43439 604 aa8.15□□□□□ -1.1
CLCN3-211ENST00000613795 TTLL5Q6EMB2 1281 aa8.15□□□□□ -1.1
CLCN3-211ENST00000613795 IQCEQ6IPM2 695 aa8.15□□□□□ -1.1
CLCN3-211ENST00000613795 MICALCLQ6ZW33 695 aa8.15□□□□□ -1.1
CLCN3-211ENST00000613795 KIF18AQ8NI77 898 aa8.15□□□□□ -1.1
CLCN3-211ENST00000613795 CTDP1Q9Y5B0 961 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-211ENST00000613795 C9orf84Q5VXU9 1444 aa8.15□□□□□ -1.1
CLCN3-211ENST00000613795 NEMFO60524 1076 aa8.15□□□□□ -1.1
CLCN3-211ENST00000613795 GCC1Q96CN9 775 aa8.15□□□□□ -1.1
CLCN3-211ENST00000613795 PCMTD1Q96MG8 357 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-211ENST00000613795 LAMC3Q9Y6N6 1575 aa8.15□□□□□ -1.11
CLCN3-211ENST00000613795 OFD1O75665 1012 aa8.15□□□□□ -1.11
CLCN3-211ENST00000613795 FAM69CQ0P6D2 419 aa8.15□□□□□ -1.11
CLCN3-211ENST00000613795 NUTM2DQ5VT03 806 aaPredicted RBP8.15□□□□□ -1.11
CLCN3-211ENST00000613795 STK11IPQ8N1F8 1099 aa8.15□□□□□ -1.11
CLCN3-211ENST00000613795 PDILTQ8N807 584 aa8.15□□□□□ -1.11
CLCN3-211ENST00000613795 TIAM1Q13009 1591 aa8.15□□□□□ -1.11
CLCN3-211ENST00000613795 CCDC141Q6ZP82 1450 aa8.15□□□□□ -1.11
CLCN3-211ENST00000613795 TOPBP1Q92547 1522 aa8.15□□□□□ -1.11
CLCN3-211ENST00000613795 IVLP07476 585 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 GNAI3P08754 354 aa8.14□□□□□ -1.11
CLCN3-211ENST00000613795 PTPN14Q15678 1187 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms