RNA–Protein interactions for RNA: ENST00000613721.4

TUBD1-216, Transcript of tubulin delta 1, humanhuman

TSL 5 BASIC

Gene TUBD1, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-216ENST00000613721 TERF2IPQ9NYB0 399 aa15.47■□□□□ 0.07
TUBD1-216ENST00000613721 CD163L1Q9NR16 1453 aa15.47■□□□□ 0.07
TUBD1-216ENST00000613721 U2AF1L5P0DN76 240 aaPredicted RBP15.46■□□□□ 0.07
TUBD1-216ENST00000613721 U2AF1Q01081 240 aaKnown RBP eCLIP15.46■□□□□ 0.07
TUBD1-216ENST00000613721 CABP1Q9NZU7 370 aa15.46■□□□□ 0.07
TUBD1-216ENST00000613721 KIF20BQ96Q89 1820 aa15.46■□□□□ 0.07
TUBD1-216ENST00000613721 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.46■□□□□ 0.07
TUBD1-216ENST00000613721 GGNBP2Q9H3C7 697 aa15.46■□□□□ 0.07
TUBD1-216ENST00000613721 COL3A1P02461 1466 aaPredicted RBP15.44■□□□□ 0.06
TUBD1-216ENST00000613721 NLRP1Q9C000 1473 aa15.44■□□□□ 0.06
TUBD1-216ENST00000613721 BCL11AQ9H165 835 aa15.44■□□□□ 0.06
TUBD1-216ENST00000613721 ADAMTS13Q76LX8 1427 aa15.44■□□□□ 0.06
TUBD1-216ENST00000613721 RARSP54136 660 aaKnown RBP15.43■□□□□ 0.06
TUBD1-216ENST00000613721 DLC1Q96QB1 1528 aa15.43■□□□□ 0.06
TUBD1-216ENST00000613721 NUTM2FA1L443 756 aa15.43■□□□□ 0.06
TUBD1-216ENST00000613721 FBLN1P23142 703 aa15.43■□□□□ 0.06
TUBD1-216ENST00000613721 NBR1Q14596 966 aa15.43■□□□□ 0.06
TUBD1-216ENST00000613721 MYH16Q9H6N6 1097 aa15.43■□□□□ 0.06
TUBD1-216ENST00000613721 HDGFL2Q7Z4V5 671 aaPredicted RBP15.42■□□□□ 0.06
TUBD1-216ENST00000613721 FRAT1Q92837 279 aaPredicted RBP15.42■□□□□ 0.06
TUBD1-216ENST00000613721 CLUAP1Q96AJ1 413 aa15.42■□□□□ 0.06
TUBD1-216ENST00000613721 ROBO2Q9HCK4 1378 aa15.42■□□□□ 0.06
TUBD1-216ENST00000613721 FYB1O15117 783 aa15.42■□□□□ 0.06
TUBD1-216ENST00000613721 FAM161AQ3B820 660 aa15.42■□□□□ 0.06
TUBD1-216ENST00000613721 PANK1Q8TE04 598 aa15.42■□□□□ 0.06
TUBD1-216ENST00000613721 COG6Q9Y2V7 657 aa15.42■□□□□ 0.06
TUBD1-216ENST00000613721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.41■□□□□ 0.06
TUBD1-216ENST00000613721 VIRMAQ69YN4 1812 aaKnown RBP15.41■□□□□ 0.06
TUBD1-216ENST00000613721 RIMS1Q86UR5 1692 aaKnown RBP15.41■□□□□ 0.06
TUBD1-216ENST00000613721 RGS3P49796 1198 aa15.41■□□□□ 0.06
TUBD1-216ENST00000613721 U2SURPO15042 1029 aaKnown RBP15.4■□□□□ 0.06
TUBD1-216ENST00000613721 DDRGK1Q96HY6 314 aa15.4■□□□□ 0.06
TUBD1-216ENST00000613721 PTPRUQ92729 1446 aa15.39■□□□□ 0.05
TUBD1-216ENST00000613721 C8orf34Q49A92 452 aa15.39■□□□□ 0.05
TUBD1-216ENST00000613721 MAPK8IP3Q9UPT6 1336 aa15.38■□□□□ 0.05
TUBD1-216ENST00000613721 IGHDP01880 384 aa15.38■□□□□ 0.05
TUBD1-216ENST00000613721 HDGFP51858 240 aaKnown RBP15.38■□□□□ 0.05
TUBD1-216ENST00000613721 AAMPQ13685 434 aa15.38■□□□□ 0.05
TUBD1-216ENST00000613721 ATP7BP35670 1465 aa15.38■□□□□ 0.05
TUBD1-216ENST00000613721 WASLO00401 505 aaPredicted RBP15.38■□□□□ 0.05
TUBD1-216ENST00000613721 PLEKHF1Q96S99 279 aa15.38■□□□□ 0.05
TUBD1-216ENST00000613721 ZRANB1Q9UGI0 708 aa15.38■□□□□ 0.05
TUBD1-216ENST00000613721 PLEKHG1Q9ULL1 1385 aa15.37■□□□□ 0.05
TUBD1-216ENST00000613721 PRKCSHP14314 528 aaPredicted RBP15.37■□□□□ 0.05
TUBD1-216ENST00000613721 BCL2L13Q9BXK5 485 aa15.37■□□□□ 0.05
TUBD1-216ENST00000613721 PRR36Q9H6K5 1346 aa15.36■□□□□ 0.05
TUBD1-216ENST00000613721 CT47B1P0C2W7 299 aaPredicted RBP15.36■□□□□ 0.05
TUBD1-216ENST00000613721 TMPOP42166 694 aaKnown RBP15.36■□□□□ 0.05
TUBD1-216ENST00000613721 EID1Q9Y6B2 187 aa15.36■□□□□ 0.05
TUBD1-216ENST00000613721 CDC42BPGQ6DT37 1551 aa15.36■□□□□ 0.05
TUBD1-216ENST00000613721 PNPLA6Q8IY17 1366 aa15.36■□□□□ 0.05
TUBD1-216ENST00000613721 RTL5Q5HYW3 569 aaPredicted RBP15.35■□□□□ 0.05
TUBD1-216ENST00000613721 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.35■□□□□ 0.05
TUBD1-216ENST00000613721 DIAPH1O60610 1272 aaKnown RBP15.35■□□□□ 0.05
TUBD1-216ENST00000613721 PPIP5K1Q6PFW1 1433 aa15.35■□□□□ 0.05
TUBD1-216ENST00000613721 NUDT16Q96DE0 195 aaKnown RBP15.35■□□□□ 0.05
TUBD1-216ENST00000613721 KNDC1Q76NI1 1749 aa15.34■□□□□ 0.05
TUBD1-216ENST00000613721 RLBP1P12271 317 aa15.34■□□□□ 0.05
TUBD1-216ENST00000613721 PMFBP1Q8TBY8 1022 aa15.34■□□□□ 0.05
TUBD1-216ENST00000613721 CPS1P31327 1500 aa15.34■□□□□ 0.05
TUBD1-216ENST00000613721 TNNQ9UQP3 1299 aa15.34■□□□□ 0.05
TUBD1-216ENST00000613721 ARHGAP23Q9P227 1491 aa15.33■□□□□ 0.05
TUBD1-216ENST00000613721 LRRC7Q96NW7 1537 aa15.33■□□□□ 0.04
TUBD1-216ENST00000613721 TSR2Q969E8 191 aaKnown RBP15.33■□□□□ 0.04
TUBD1-216ENST00000613721 RBM33Q96EV2 1170 aaKnown RBP15.33■□□□□ 0.04
TUBD1-216ENST00000613721 PNNQ9H307 717 aaKnown RBP15.33■□□□□ 0.04
TUBD1-216ENST00000613721 TRIM35Q9UPQ4 493 aa15.33■□□□□ 0.04
TUBD1-216ENST00000613721 AMOTL2Q9Y2J4 779 aa15.33■□□□□ 0.04
TUBD1-216ENST00000613721 TECPR2O15040 1411 aa15.33■□□□□ 0.04
TUBD1-216ENST00000613721 SLIT1O75093 1534 aa15.33■□□□□ 0.04
TUBD1-216ENST00000613721 PPP4R3CPQ6ZMV5 832 aa15.32■□□□□ 0.04
TUBD1-216ENST00000613721 NME9Q86XW9 330 aa15.32■□□□□ 0.04
TUBD1-216ENST00000613721 MAP2P11137 1827 aaKnown RBP15.32■□□□□ 0.04
TUBD1-216ENST00000613721 IL16Q14005 1332 aa15.32■□□□□ 0.04
TUBD1-216ENST00000613721 THEMISQ8N1K5 641 aaPredicted RBP15.32■□□□□ 0.04
TUBD1-216ENST00000613721 ZKSCAN2Q63HK3 967 aa15.31■□□□□ 0.04
TUBD1-216ENST00000613721 FAM135BQ49AJ0 1406 aa15.31■□□□□ 0.04
TUBD1-216ENST00000613721 HOXD11P31277 338 aaPredicted RBP15.31■□□□□ 0.04
TUBD1-216ENST00000613721 DEKP35659 375 aaKnown RBP15.31■□□□□ 0.04
TUBD1-216ENST00000613721 EXOSC9Q06265 439 aaKnown RBP15.31■□□□□ 0.04
TUBD1-216ENST00000613721 LAS1LQ9Y4W2 734 aaKnown RBP15.31■□□□□ 0.04
TUBD1-216ENST00000613721 PPM1GO15355 546 aaPredicted RBP15.3■□□□□ 0.04
TUBD1-216ENST00000613721 RIPK4P57078 832 aa15.3■□□□□ 0.04
TUBD1-216ENST00000613721 CEP170BQ9Y4F5 1589 aaPredicted RBP15.3■□□□□ 0.04
TUBD1-216ENST00000613721 EDC4Q6P2E9 1401 aaKnown RBP15.29■□□□□ 0.04
TUBD1-216ENST00000613721 MVPQ14764 893 aaKnown RBP15.29■□□□□ 0.04
TUBD1-216ENST00000613721 FTSJ3Q8IY81 847 aaKnown RBP15.29■□□□□ 0.04
TUBD1-216ENST00000613721 SMC4Q9NTJ3 1288 aa15.29■□□□□ 0.04
TUBD1-216ENST00000613721 PCDHB15Q9Y5E8 787 aa15.29■□□□□ 0.04
TUBD1-216ENST00000613721 CPSF1Q10570 1443 aaKnown RBP15.29■□□□□ 0.04
TUBD1-216ENST00000613721 FCHSD2O94868 740 aa15.28■□□□□ 0.04
TUBD1-216ENST00000613721 DZIP1LQ8IYY4 767 aaKnown RBP15.28■□□□□ 0.04
TUBD1-216ENST00000613721 MON2Q7Z3U7 1717 aa15.28■□□□□ 0.04
TUBD1-216ENST00000613721 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
TUBD1-216ENST00000613721 POLKQ9UBT6 870 aa15.28■□□□□ 0.04
TUBD1-216ENST00000613721 KCNA6P17658 529 aa15.27■□□□□ 0.04
TUBD1-216ENST00000613721 DAXXQ9UER7 740 aaPredicted RBP15.27■□□□□ 0.04
TUBD1-216ENST00000613721 CCDC61Q9Y6R9 512 aa15.27■□□□□ 0.04
TUBD1-216ENST00000613721 ADAMTSL3P82987 1691 aa15.27■□□□□ 0.03
TUBD1-216ENST00000613721 ITSN1Q15811 1721 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 211.1 ms