RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
HPS1-215ENST00000613394 CASC1Q6TDU7 716 aa17.16■□□□□ 0.34
HPS1-215ENST00000613394 NECTIN2Q92692 538 aa17.16■□□□□ 0.34
HPS1-215ENST00000613394 FAM83GA6ND36 823 aa17.15■□□□□ 0.34
HPS1-215ENST00000613394 TSPYL6Q8N831 410 aa17.15■□□□□ 0.34
HPS1-215ENST00000613394 SYNMO15061 1565 aa17.15■□□□□ 0.34
HPS1-215ENST00000613394 CCDC27Q2M243 656 aa17.15■□□□□ 0.34
HPS1-215ENST00000613394 GNAI1P63096 354 aa17.14■□□□□ 0.33
HPS1-215ENST00000613394 COG3Q96JB2 828 aa17.14■□□□□ 0.33
HPS1-215ENST00000613394 PHACTR3Q96KR7 559 aa17.14■□□□□ 0.33
HPS1-215ENST00000613394 CT47B1P0C2W7 299 aaPredicted RBP17.13■□□□□ 0.33
HPS1-215ENST00000613394 ZRANB1Q9UGI0 708 aa17.13■□□□□ 0.33
HPS1-215ENST00000613394 A0A1W2PP64 1363 aa17.13■□□□□ 0.33
HPS1-215ENST00000613394 RTEL1-TNFRSF6BF6WH68 1400 aa17.13■□□□□ 0.33
HPS1-215ENST00000613394 TXNDC2Q86VQ3 553 aa17.13■□□□□ 0.33
HPS1-215ENST00000613394 RPGRIP1LQ68CZ1 1315 aa17.13■□□□□ 0.33
HPS1-215ENST00000613394 ANKRD36BQ8N2N9 1353 aa17.13■□□□□ 0.33
HPS1-215ENST00000613394 CLTCL1P53675 1640 aa17.13■□□□□ 0.33
HPS1-215ENST00000613394 KDM5AP29375 1690 aaKnown RBP17.13■□□□□ 0.33
HPS1-215ENST00000613394 NME9Q86XW9 330 aa17.12■□□□□ 0.33
HPS1-215ENST00000613394 TNPO1Q92973 898 aaKnown RBP17.12■□□□□ 0.33
HPS1-215ENST00000613394 RRAGDQ9NQL2 400 aaPredicted RBP17.12■□□□□ 0.33
HPS1-215ENST00000613394 TRPM2O94759 1503 aa17.12■□□□□ 0.33
HPS1-215ENST00000613394 MRE11P49959 708 aa17.12■□□□□ 0.33
HPS1-215ENST00000613394 HDAC1Q13547 482 aaPredicted RBP17.12■□□□□ 0.33
HPS1-215ENST00000613394 ZBTB40Q9NUA8 1239 aa17.12■□□□□ 0.33
HPS1-215ENST00000613394 ATP7AQ04656 1500 aa17.12■□□□□ 0.33
HPS1-215ENST00000613394 GRPEL1Q9HAV7 217 aa17.11■□□□□ 0.33
HPS1-215ENST00000613394 MADDQ8WXG6 1647 aa17.11■□□□□ 0.33
HPS1-215ENST00000613394 FCHSD2O94868 740 aa17.11■□□□□ 0.33
HPS1-215ENST00000613394 MCTP1Q6DN14 999 aa17.11■□□□□ 0.33
HPS1-215ENST00000613394 ABCC1P33527 1531 aa17.1■□□□□ 0.33
HPS1-215ENST00000613394 MIS18AQ9NYP9 233 aa17.1■□□□□ 0.33
HPS1-215ENST00000613394 SMARCA5O60264 1052 aaPredicted RBP17.1■□□□□ 0.33
HPS1-215ENST00000613394 ANTXR1Q9H6X2 564 aa17.1■□□□□ 0.33
HPS1-215ENST00000613394 NFE2L2Q16236 605 aa17.09■□□□□ 0.33
HPS1-215ENST00000613394 TBC1D9Q6ZT07 1266 aa17.09■□□□□ 0.33
HPS1-215ENST00000613394 SMC5Q8IY18 1101 aa17.09■□□□□ 0.33
HPS1-215ENST00000613394 CD109Q6YHK3 1445 aa17.09■□□□□ 0.33
HPS1-215ENST00000613394 NUCB1Q02818 461 aa17.09■□□□□ 0.33
HPS1-215ENST00000613394 API5Q9BZZ5 524 aaKnown RBP17.09■□□□□ 0.33
HPS1-215ENST00000613394 ASXL2Q76L83 1435 aa17.09■□□□□ 0.33
HPS1-215ENST00000613394 CDC45O75419 566 aa17.09■□□□□ 0.33
HPS1-215ENST00000613394 SSFA2P28290 1259 aa17.09■□□□□ 0.33
HPS1-215ENST00000613394 ARID3AQ99856 593 aa17.09■□□□□ 0.33
HPS1-215ENST00000613394 PLXNC1O60486 1568 aa17.08■□□□□ 0.33
HPS1-215ENST00000613394 TRIM6-TRIM34B2RNG4 842 aa17.08■□□□□ 0.32
HPS1-215ENST00000613394 KRT24Q2M2I5 525 aa17.08■□□□□ 0.32
HPS1-215ENST00000613394 RTF1Q92541 710 aaKnown RBP17.08■□□□□ 0.32
HPS1-215ENST00000613394 NCKAP5LQ9HCH0 1330 aa17.08■□□□□ 0.32
HPS1-215ENST00000613394 SULT6B1Q6IMI4 303 aa17.08■□□□□ 0.32
HPS1-215ENST00000613394 GCC1Q96CN9 775 aa17.07■□□□□ 0.32
HPS1-215ENST00000613394 ATAD2Q6PL18 1390 aa17.07■□□□□ 0.32
HPS1-215ENST00000613394 LMOD3Q0VAK6 560 aa17.07■□□□□ 0.32
HPS1-215ENST00000613394 C16orf71Q8IYS4 520 aaPredicted RBP17.07■□□□□ 0.32
HPS1-215ENST00000613394 MBIPQ9NS73 344 aa17.07■□□□□ 0.32
HPS1-215ENST00000613394 K7ELQ4 463 aaPredicted RBP17.07■□□□□ 0.32
HPS1-215ENST00000613394 LTV1Q96GA3 475 aaPredicted RBP17.07■□□□□ 0.32
HPS1-215ENST00000613394 SLC52A1Q9NWF4 448 aa17.07■□□□□ 0.32
HPS1-215ENST00000613394 C8orf58Q8NAV2 365 aa17.06■□□□□ 0.32
HPS1-215ENST00000613394 MCM10Q7L590 875 aa17.06■□□□□ 0.32
HPS1-215ENST00000613394 RILPL2Q969X0 211 aa17.06■□□□□ 0.32
HPS1-215ENST00000613394 POLKQ9UBT6 870 aa17.06■□□□□ 0.32
HPS1-215ENST00000613394 PTMAP06454 111 aaKnown RBP17.05■□□□□ 0.32
HPS1-215ENST00000613394 MSNP26038 577 aaKnown RBP17.05■□□□□ 0.32
HPS1-215ENST00000613394 NPATQ14207 1427 aa17.05■□□□□ 0.32
HPS1-215ENST00000613394 PLCB2Q00722 1185 aa17.05■□□□□ 0.32
HPS1-215ENST00000613394 CAVIN1Q6NZI2 390 aaKnown RBP17.05■□□□□ 0.32
HPS1-215ENST00000613394 FAM69CQ0P6D2 419 aa17.04■□□□□ 0.32
HPS1-215ENST00000613394 ALDH1L2Q3SY69 923 aa17.04■□□□□ 0.32
HPS1-215ENST00000613394 VAMP4O75379 141 aa17.03■□□□□ 0.32
HPS1-215ENST00000613394 GLIPR1L2Q4G1C9 344 aa17.03■□□□□ 0.32
HPS1-215ENST00000613394 PLEKHF1Q96S99 279 aa17.03■□□□□ 0.32
HPS1-215ENST00000613394 ZFYVE16Q7Z3T8 1539 aa17.03■□□□□ 0.32
HPS1-215ENST00000613394 ST18O60284 1047 aa17.03■□□□□ 0.32
HPS1-215ENST00000613394 BMP2KLQ5H9B9 411 aa17.03■□□□□ 0.32
HPS1-215ENST00000613394 SKOR2Q2VWA4 1001 aaPredicted RBP17.02■□□□□ 0.32
HPS1-215ENST00000613394 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.32
HPS1-215ENST00000613394 ZNF518AQ6AHZ1 1483 aa17.02■□□□□ 0.32
HPS1-215ENST00000613394 LAMC1P11047 1609 aa17.02■□□□□ 0.31
HPS1-215ENST00000613394 NSD2O96028 1365 aa17.02■□□□□ 0.31
HPS1-215ENST00000613394 ABCC11Q96J66 1382 aa17.02■□□□□ 0.31
HPS1-215ENST00000613394 SLC4A2P04920 1241 aa17.01■□□□□ 0.31
HPS1-215ENST00000613394 NASPP49321 788 aaPredicted RBP17.01■□□□□ 0.31
HPS1-215ENST00000613394 ZCCHC11Q5TAX3 1644 aaKnown RBP17.01■□□□□ 0.31
HPS1-215ENST00000613394 TSHZ3Q63HK5 1081 aa17.01■□□□□ 0.31
HPS1-215ENST00000613394 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.01■□□□□ 0.31
HPS1-215ENST00000613394 GAS2L2Q8NHY3 880 aa17.01■□□□□ 0.31
HPS1-215ENST00000613394 PRPF40AO75400 957 aaKnown RBP17.01■□□□□ 0.31
HPS1-215ENST00000613394 AEBP1Q8IUX7 1158 aa17.01■□□□□ 0.31
HPS1-215ENST00000613394 MRPL50Q8N5N7 158 aaKnown RBP17.01■□□□□ 0.31
HPS1-215ENST00000613394 SBNO2Q9Y2G9 1366 aa17.01■□□□□ 0.31
HPS1-215ENST00000613394 ESPNB1AK53 854 aa17■□□□□ 0.31
HPS1-215ENST00000613394 ZBTB7BO15156 539 aaPredicted RBP17■□□□□ 0.31
HPS1-215ENST00000613394 F6X3S4 739 aa17■□□□□ 0.31
HPS1-215ENST00000613394 CD2BP2O95400 341 aaKnown RBP17■□□□□ 0.31
HPS1-215ENST00000613394 NUTM2GQ5VZR2 741 aa17■□□□□ 0.31
HPS1-215ENST00000613394 INTS3Q68E01 1043 aaKnown RBP17■□□□□ 0.31
HPS1-215ENST00000613394 OTUD7AQ8TE49 926 aaPredicted RBP17■□□□□ 0.31
HPS1-215ENST00000613394 RNF214Q8ND24 703 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms