RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 CHD1LQ86WJ1 897 aa20.64■□□□□ 0.9
TSKU-205ENST00000612930 GOLGA6L22H0YM25 854 aa20.64■□□□□ 0.89
TSKU-205ENST00000612930 BMP2KLQ5H9B9 411 aa20.64■□□□□ 0.89
TSKU-205ENST00000612930 SLC12A5Q9H2X9 1139 aa20.64■□□□□ 0.89
TSKU-205ENST00000612930 MYO3AQ8NEV4 1616 aa20.64■□□□□ 0.89
TSKU-205ENST00000612930 AK9Q5TCS8 1911 aa20.63■□□□□ 0.89
TSKU-205ENST00000612930 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.63■□□□□ 0.89
TSKU-205ENST00000612930 ZNF445P59923 1031 aa20.63■□□□□ 0.89
TSKU-205ENST00000612930 ARHGAP31Q2M1Z3 1444 aa20.63■□□□□ 0.89
TSKU-205ENST00000612930 FAM13BQ9NYF5 915 aa20.62■□□□□ 0.89
TSKU-205ENST00000612930 CFAP74Q9C0B2 1584 aa20.62■□□□□ 0.89
TSKU-205ENST00000612930 SBNO2Q9Y2G9 1366 aa20.62■□□□□ 0.89
TSKU-205ENST00000612930 HS1BP3Q53T59 392 aa20.62■□□□□ 0.89
TSKU-205ENST00000612930 CFAP53Q96M91 514 aa20.62■□□□□ 0.89
TSKU-205ENST00000612930 U2AF1L5P0DN76 240 aaPredicted RBP20.61■□□□□ 0.89
TSKU-205ENST00000612930 U2AF1Q01081 240 aaKnown RBP eCLIP20.61■□□□□ 0.89
TSKU-205ENST00000612930 NOL7Q9UMY1 257 aaKnown RBP20.61■□□□□ 0.89
TSKU-205ENST00000612930 NOS1P29475 1434 aa20.61■□□□□ 0.89
TSKU-205ENST00000612930 ZNF500O60304 480 aaPredicted RBP20.61■□□□□ 0.89
TSKU-205ENST00000612930 ADGRL1O94910 1474 aa20.6■□□□□ 0.89
TSKU-205ENST00000612930 MAP7D2Q96T17 732 aa20.6■□□□□ 0.89
TSKU-205ENST00000612930 MYOM2P54296 1465 aa20.6■□□□□ 0.89
TSKU-205ENST00000612930 PDLIM2Q96JY6 352 aa20.6■□□□□ 0.89
TSKU-205ENST00000612930 TBC1D9Q6ZT07 1266 aa20.59■□□□□ 0.89
TSKU-205ENST00000612930 RBSNQ9H1K0 784 aa20.59■□□□□ 0.89
TSKU-205ENST00000612930 XPCQ01831 940 aaPredicted RBP20.59■□□□□ 0.89
TSKU-205ENST00000612930 ZSCAN23Q3MJ62 389 aa20.58■□□□□ 0.89
TSKU-205ENST00000612930 CD109Q6YHK3 1445 aa20.58■□□□□ 0.89
TSKU-205ENST00000612930 CAVIN1Q6NZI2 390 aaKnown RBP20.57■□□□□ 0.88
TSKU-205ENST00000612930 TRIM35Q9UPQ4 493 aa20.57■□□□□ 0.88
TSKU-205ENST00000612930 USP32Q8NFA0 1604 aa20.57■□□□□ 0.88
TSKU-205ENST00000612930 TRAPPC8Q9Y2L5 1435 aa20.57■□□□□ 0.88
TSKU-205ENST00000612930 UQCRHLA0A096LP55 91 aa20.57■□□□□ 0.88
TSKU-205ENST00000612930 UQCRHP07919 91 aa20.57■□□□□ 0.88
TSKU-205ENST00000612930 MCTP1Q6DN14 999 aa20.57■□□□□ 0.88
TSKU-205ENST00000612930 TET3O43151 1660 aa20.56■□□□□ 0.88
TSKU-205ENST00000612930 LMBRD1Q9NUN5 540 aa20.56■□□□□ 0.88
TSKU-205ENST00000612930 NEURL4Q96JN8 1562 aa20.56■□□□□ 0.88
TSKU-205ENST00000612930 UGGT1Q9NYU2 1555 aa20.55■□□□□ 0.88
TSKU-205ENST00000612930 ANKRD45Q5TZF3 282 aa20.55■□□□□ 0.88
TSKU-205ENST00000612930 NCLP19338 710 aaKnown RBP20.54■□□□□ 0.88
TSKU-205ENST00000612930 TMPOP42166 694 aaKnown RBP20.54■□□□□ 0.88
TSKU-205ENST00000612930 PLEKHF1Q96S99 279 aa20.54■□□□□ 0.88
TSKU-205ENST00000612930 ABCC11Q96J66 1382 aa20.54■□□□□ 0.88
TSKU-205ENST00000612930 PRIM1P49642 420 aaKnown RBP20.53■□□□□ 0.88
TSKU-205ENST00000612930 DEPDC5O75140 1603 aa20.53■□□□□ 0.88
TSKU-205ENST00000612930 CYP2E1P05181 493 aaPredicted RBP20.53■□□□□ 0.88
TSKU-205ENST00000612930 IFT172Q9UG01 1749 aa20.53■□□□□ 0.88
TSKU-205ENST00000612930 PPIP5K1Q6PFW1 1433 aa20.53■□□□□ 0.88
TSKU-205ENST00000612930 KIF16BQ96L93 1317 aa20.52■□□□□ 0.88
TSKU-205ENST00000612930 ZC3H13Q5T200 1668 aaKnown RBP20.52■□□□□ 0.88
TSKU-205ENST00000612930 IPO8O15397 1037 aaKnown RBP20.52■□□□□ 0.88
TSKU-205ENST00000612930 ZKSCAN5Q9Y2L8 839 aa20.52■□□□□ 0.88
TSKU-205ENST00000612930 ABCC1P33527 1531 aa20.51■□□□□ 0.87
TSKU-205ENST00000612930 PKP1Q13835 747 aa20.51■□□□□ 0.87
TSKU-205ENST00000612930 PLCH2O75038 1416 aa20.5■□□□□ 0.87
TSKU-205ENST00000612930 TRAK1Q9UPV9 953 aa20.5■□□□□ 0.87
TSKU-205ENST00000612930 INO80Q9ULG1 1556 aaPredicted RBP20.5■□□□□ 0.87
TSKU-205ENST00000612930 DYNC1I1O14576 645 aa20.5■□□□□ 0.87
TSKU-205ENST00000612930 NUCB2P80303 420 aa20.5■□□□□ 0.87
TSKU-205ENST00000612930 GCC1Q96CN9 775 aa20.5■□□□□ 0.87
TSKU-205ENST00000612930 QRICH2Q9H0J4 1663 aa20.5■□□□□ 0.87
TSKU-205ENST00000612930 NRXN1Q9ULB1 1477 aa20.49■□□□□ 0.87
TSKU-205ENST00000612930 IL16Q14005 1332 aa20.49■□□□□ 0.87
TSKU-205ENST00000612930 PPRC1Q5VV67 1664 aaKnown RBP20.49■□□□□ 0.87
TSKU-205ENST00000612930 RBM27Q9P2N5 1060 aaKnown RBP20.49■□□□□ 0.87
TSKU-205ENST00000612930 SMAP1Q8IYB5 467 aaPredicted RBP20.48■□□□□ 0.87
TSKU-205ENST00000612930 GPT2Q8TD30 523 aa20.48■□□□□ 0.87
TSKU-205ENST00000612930 MED14O60244 1454 aa20.48■□□□□ 0.87
TSKU-205ENST00000612930 KIF1BO60333 1816 aa20.48■□□□□ 0.87
TSKU-205ENST00000612930 MROH2AA6NES4 1674 aa20.48■□□□□ 0.87
TSKU-205ENST00000612930 ZBTB7BO15156 539 aaPredicted RBP20.48■□□□□ 0.87
TSKU-205ENST00000612930 EFCAB2Q5VUJ9 269 aa20.48■□□□□ 0.87
TSKU-205ENST00000612930 C1orf115Q9H7X2 142 aa20.48■□□□□ 0.87
TSKU-205ENST00000612930 SPAG9O60271 1321 aaKnown RBP20.47■□□□□ 0.87
TSKU-205ENST00000612930 VWDEQ8N2E2 1590 aa20.47■□□□□ 0.87
TSKU-205ENST00000612930 CSPP1Q1MSJ5 1256 aa20.47■□□□□ 0.87
TSKU-205ENST00000612930 PODXL2Q9NZ53 605 aa20.47■□□□□ 0.87
TSKU-205ENST00000612930 CDC45O75419 566 aa20.47■□□□□ 0.87
TSKU-205ENST00000612930 ARID3AQ99856 593 aa20.47■□□□□ 0.87
TSKU-205ENST00000612930 U2SURPO15042 1029 aaKnown RBP20.46■□□□□ 0.87
TSKU-205ENST00000612930 RABEP1Q15276 862 aa20.46■□□□□ 0.87
TSKU-205ENST00000612930 SETBP1Q9Y6X0 1596 aa20.46■□□□□ 0.87
TSKU-205ENST00000612930 MCM5P33992 734 aa20.46■□□□□ 0.87
TSKU-205ENST00000612930 ALDH1L2Q3SY69 923 aa20.46■□□□□ 0.87
TSKU-205ENST00000612930 MTERF4Q7Z6M4 381 aaKnown RBP20.46■□□□□ 0.87
TSKU-205ENST00000612930 PRPF40AO75400 957 aaKnown RBP20.45■□□□□ 0.86
TSKU-205ENST00000612930 SIRT2Q8IXJ6 389 aa20.45■□□□□ 0.86
TSKU-205ENST00000612930 ZFYVE16Q7Z3T8 1539 aa20.45■□□□□ 0.86
TSKU-205ENST00000612930 AFAP1Q8N556 730 aa20.45■□□□□ 0.86
TSKU-205ENST00000612930 GSPT1P15170 499 aaKnown RBP20.44■□□□□ 0.86
TSKU-205ENST00000612930 SASS6Q6UVJ0 657 aa20.44■□□□□ 0.86
TSKU-205ENST00000612930 NSD2O96028 1365 aa20.43■□□□□ 0.86
TSKU-205ENST00000612930 TMEM63CQ9P1W3 806 aa20.43■□□□□ 0.86
TSKU-205ENST00000612930 ZDHHC9Q9Y397 364 aa20.43■□□□□ 0.86
TSKU-205ENST00000612930 LRSAM1Q6UWE0 723 aa20.42■□□□□ 0.86
TSKU-205ENST00000612930 COL3A1P02461 1466 aaPredicted RBP20.42■□□□□ 0.86
TSKU-205ENST00000612930 CCDC39Q9UFE4 941 aa20.42■□□□□ 0.86
TSKU-205ENST00000612930 ANKRD36BQ8N2N9 1353 aa20.41■□□□□ 0.86
TSKU-205ENST00000612930 ZGPATQ8N5A5 531 aaKnown RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms