RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 RAB3GAP2Q9H2M9 1393 aa34.73■■■■□ 3.15
MMP28-203ENST00000612672 A0A0G2JS52 829 aa34.71■■■■□ 3.15
MMP28-203ENST00000612672 PSDA5PKW4 1024 aaPredicted RBP34.71■■■■□ 3.15
MMP28-203ENST00000612672 MYT1Q01538 1121 aa34.71■■■■□ 3.15
MMP28-203ENST00000612672 FAM182BQ5T319 152 aa34.71■■■■□ 3.15
MMP28-203ENST00000612672 PHRF1Q9P1Y6 1649 aaKnown RBP34.69■■■■□ 3.14
MMP28-203ENST00000612672 GPRASP1Q5JY77 1395 aa34.67■■■■□ 3.14
MMP28-203ENST00000612672 ITSN1Q15811 1721 aa34.67■■■■□ 3.14
MMP28-203ENST00000612672 ATP7BP35670 1465 aa34.66■■■■□ 3.14
MMP28-203ENST00000612672 SPATA31A5Q5VU36 1347 aa34.66■■■■□ 3.14
MMP28-203ENST00000612672 SPATA31A7Q8IWB4 1347 aa34.66■■■■□ 3.14
MMP28-203ENST00000612672 WASLO00401 505 aaPredicted RBP34.66■■■■□ 3.14
MMP28-203ENST00000612672 BAG6P46379 1132 aa34.64■■■■□ 3.14
MMP28-203ENST00000612672 EIF3AQ14152 1382 aaKnown RBP34.63■■■■□ 3.13
MMP28-203ENST00000612672 KDM2AQ9Y2K7 1162 aa34.63■■■■□ 3.13
MMP28-203ENST00000612672 HRCP23327 699 aa34.62■■■■□ 3.13
MMP28-203ENST00000612672 EN1Q05925 392 aaPredicted RBP34.62■■■■□ 3.13
MMP28-203ENST00000612672 TOPAZ1Q8N9V7 1692 aa34.6■■■■□ 3.13
MMP28-203ENST00000612672 NGDNQ8NEJ9 315 aaKnown RBP34.58■■■■□ 3.13
MMP28-203ENST00000612672 DCAF11Q8TEB1 546 aa34.58■■■■□ 3.13
MMP28-203ENST00000612672 DISP2A7MBM2 1401 aa34.57■■■■□ 3.13
MMP28-203ENST00000612672 PAK3O75914 559 aaPredicted RBP34.57■■■■□ 3.12
MMP28-203ENST00000612672 KIAA0232Q92628 1395 aa34.57■■■■□ 3.12
MMP28-203ENST00000612672 PRDM11Q9NQV5 511 aa34.55■■■■□ 3.12
MMP28-203ENST00000612672 CHRNA2Q15822 529 aa34.53■■■■□ 3.12
MMP28-203ENST00000612672 SPATA31A1Q5TZJ5 1347 aa34.52■■■■□ 3.12
MMP28-203ENST00000612672 NRKQ7Z2Y5 1582 aa34.51■■■■□ 3.12
MMP28-203ENST00000612672 NUDT16Q96DE0 195 aaKnown RBP34.5■■■■□ 3.11
MMP28-203ENST00000612672 R3HDM1Q15032 1099 aaKnown RBP34.49■■■■□ 3.11
MMP28-203ENST00000612672 EZH2Q15910 746 aaKnown RBP34.48■■■■□ 3.11
MMP28-203ENST00000612672 NUTM2GQ5VZR2 741 aa34.48■■■■□ 3.11
MMP28-203ENST00000612672 RREB1Q92766 1687 aa34.47■■■■□ 3.11
MMP28-203ENST00000612672 LMO7Q8WWI1 1683 aa34.46■■■■□ 3.11
MMP28-203ENST00000612672 ZC3H6P61129 1189 aaKnown RBP34.45■■■■□ 3.11
MMP28-203ENST00000612672 STRN4Q9NRL3 753 aa34.45■■■■□ 3.11
MMP28-203ENST00000612672 POLR3AO14802 1390 aaPredicted RBP34.44■■■■□ 3.1
MMP28-203ENST00000612672 CAMTA1Q9Y6Y1 1673 aa34.43■■■■□ 3.1
MMP28-203ENST00000612672 NUP188Q5SRE5 1749 aa34.43■■■■□ 3.1
MMP28-203ENST00000612672 TRIM37O94972 964 aa34.42■■■■□ 3.1
MMP28-203ENST00000612672 CAMKK2Q96RR4 588 aa34.42■■■■□ 3.1
MMP28-203ENST00000612672 SSH2Q76I76 1423 aa34.41■■■■□ 3.1
MMP28-203ENST00000612672 CDK19Q9BWU1 502 aa34.41■■■■□ 3.1
MMP28-203ENST00000612672 ACEP12821 1306 aa34.39■■■■□ 3.1
MMP28-203ENST00000612672 KIAA1210Q9ULL0 1709 aa34.38■■■■□ 3.09
MMP28-203ENST00000612672 USP35Q9P2H5 1018 aa34.37■■■■□ 3.09
MMP28-203ENST00000612672 STAC3Q96MF2 364 aa34.35■■■■□ 3.09
MMP28-203ENST00000612672 NBPF8Q3BBV2 869 aa34.34■■■■□ 3.09
MMP28-203ENST00000612672 FAM196AQ6ZSG2 479 aa34.34■■■■□ 3.09
MMP28-203ENST00000612672 LARP1Q6PKG0 1096 aaKnown RBP34.33■■■■□ 3.09
MMP28-203ENST00000612672 USP19O94966 1318 aa34.31■■■■□ 3.08
MMP28-203ENST00000612672 PARP4Q9UKK3 1724 aaKnown RBP34.31■■■■□ 3.08
MMP28-203ENST00000612672 PLEKHG3A1L390 1219 aa34.3■■■■□ 3.08
MMP28-203ENST00000612672 APBA3O96018 575 aa34.3■■■■□ 3.08
MMP28-203ENST00000612672 BARGINQ6ZT62 677 aa34.3■■■■□ 3.08
MMP28-203ENST00000612672 CPDO75976 1380 aa34.29■■■■□ 3.08
MMP28-203ENST00000612672 CCDC61Q9Y6R9 512 aa34.29■■■■□ 3.08
MMP28-203ENST00000612672 PARD3Q8TEW0 1356 aa34.26■■■■□ 3.08
MMP28-203ENST00000612672 NBPF1Q3BBV0 1214 aa34.26■■■■□ 3.08
MMP28-203ENST00000612672 PEAK1Q9H792 1746 aa34.25■■■■□ 3.07
MMP28-203ENST00000612672 ABTB2Q8N961 1025 aa34.25■■■■□ 3.07
MMP28-203ENST00000612672 COL5A2P05997 1499 aaPredicted RBP34.25■■■■□ 3.07
MMP28-203ENST00000612672 EVA1CP58658 441 aa34.24■■■■□ 3.07
MMP28-203ENST00000612672 PPIP5K1Q6PFW1 1433 aa34.23■■■■□ 3.07
MMP28-203ENST00000612672 QRICH2Q9H0J4 1663 aa34.23■■■■□ 3.07
MMP28-203ENST00000612672 TCP11L2Q8N4U5 519 aa34.22■■■■□ 3.07
MMP28-203ENST00000612672 PDE3BQ13370 1112 aa34.21■■■■□ 3.07
MMP28-203ENST00000612672 LRRC37A3O60309 1634 aa34.21■■■■□ 3.07
MMP28-203ENST00000612672 SBF2Q86WG5 1849 aa34.2■■■■□ 3.07
MMP28-203ENST00000612672 WNK3Q9BYP7 1800 aa34.18■■■■□ 3.06
MMP28-203ENST00000612672 GCP02774 474 aa34.17■■■■□ 3.06
MMP28-203ENST00000612672 COL18A1P39060 1754 aa34.17■■■■□ 3.06
MMP28-203ENST00000612672 PIK3C2AO00443 1686 aa34.16■■■■□ 3.06
MMP28-203ENST00000612672 SLIT3O75094 1523 aa34.16■■■■□ 3.06
MMP28-203ENST00000612672 CABP2Q9NPB3 220 aa34.16■■■■□ 3.06
MMP28-203ENST00000612672 SRPK2P78362 688 aaKnown RBP34.12■■■■□ 3.05
MMP28-203ENST00000612672 RGPD3A6NKT7 1758 aaPredicted RBP34.12■■■■□ 3.05
MMP28-203ENST00000612672 RGPD4Q7Z3J3 1758 aa34.12■■■■□ 3.05
MMP28-203ENST00000612672 CRB1P82279 1406 aa34.12■■■■□ 3.05
MMP28-203ENST00000612672 CENPJQ9HC77 1338 aaPredicted RBP34.11■■■■□ 3.05
MMP28-203ENST00000612672 NLRP13Q86W25 1043 aa34.11■■■■□ 3.05
MMP28-203ENST00000612672 THRAP3Q9Y2W1 955 aaKnown RBP34.11■■■■□ 3.05
MMP28-203ENST00000612672 USP6P35125 1406 aa34.11■■■■□ 3.05
MMP28-203ENST00000612672 RGPD5Q99666 1765 aa34.08■■■■□ 3.05
MMP28-203ENST00000612672 ZBTB7CA1YPR0 619 aa34.07■■■■□ 3.04
MMP28-203ENST00000612672 OVOS2A0A0G2JMS6 1433 aa34.06■■■■□ 3.04
MMP28-203ENST00000612672 OVOS2A0A0J9YW53 1432 aa34.06■■■■□ 3.04
MMP28-203ENST00000612672 OVOS2Q6IE36 1432 aa34.06■■■■□ 3.04
MMP28-203ENST00000612672 PTF1AQ7RTS3 328 aa34.06■■■■□ 3.04
MMP28-203ENST00000612672 CASZ1Q86V15 1759 aa34.06■■■■□ 3.04
MMP28-203ENST00000612672 AATKQ6ZMQ8 1374 aa34.04■■■■□ 3.04
MMP28-203ENST00000612672 CABP1Q9NZU7 370 aa34.04■■■■□ 3.04
MMP28-203ENST00000612672 NBPF14Q5TI25 921 aa34.03■■■■□ 3.04
MMP28-203ENST00000612672 BRD4O60885 1362 aaPredicted RBP34.02■■■■□ 3.04
MMP28-203ENST00000612672 AKAP12Q02952 1782 aa34.02■■■■□ 3.04
MMP28-203ENST00000612672 NLRP6P59044 892 aa34.01■■■■□ 3.03
MMP28-203ENST00000612672 ANO8Q9HCE9 1232 aaPredicted RBP34.01■■■■□ 3.03
MMP28-203ENST00000612672 AXIN2Q9Y2T1 843 aa34■■■■□ 3.03
MMP28-203ENST00000612672 TRPM1Q7Z4N2 1603 aa33.98■■■■□ 3.03
MMP28-203ENST00000612672 UTRNP46939 3433 aa33.97■■■■□ 3.03
MMP28-203ENST00000612672 CPSF1Q10570 1443 aaKnown RBP33.96■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms