RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 STAG3Q9UJ98 1225 aa17.52■□□□□ 0.39
HOXA3-207ENST00000612286 ATP10AO60312 1499 aa17.52■□□□□ 0.39
HOXA3-207ENST00000612286 DIAPH1O60610 1272 aaKnown RBP17.51■□□□□ 0.39
HOXA3-207ENST00000612286 NECTIN2Q92692 538 aa17.51■□□□□ 0.39
HOXA3-207ENST00000612286 NUP160Q12769 1436 aa17.51■□□□□ 0.39
HOXA3-207ENST00000612286 PLPPR3Q6T4P5 718 aa17.51■□□□□ 0.39
HOXA3-207ENST00000612286 SLC4A10Q6U841 1118 aa17.51■□□□□ 0.39
HOXA3-207ENST00000612286 ZGPATQ8N5A5 531 aaKnown RBP17.51■□□□□ 0.39
HOXA3-207ENST00000612286 ZRANB1Q9UGI0 708 aa17.5■□□□□ 0.39
HOXA3-207ENST00000612286 K7ELQ4 463 aaPredicted RBP17.5■□□□□ 0.39
HOXA3-207ENST00000612286 ZNF692Q9BU19 519 aaPredicted RBP17.5■□□□□ 0.39
HOXA3-207ENST00000612286 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.5■□□□□ 0.39
HOXA3-207ENST00000612286 ZNF428Q96B54 188 aa17.49■□□□□ 0.39
HOXA3-207ENST00000612286 SYNMO15061 1565 aa17.49■□□□□ 0.39
HOXA3-207ENST00000612286 EVC2Q86UK5 1308 aa17.49■□□□□ 0.39
HOXA3-207ENST00000612286 NUCB1Q02818 461 aa17.49■□□□□ 0.39
HOXA3-207ENST00000612286 CABP1Q9NZU7 370 aa17.49■□□□□ 0.39
HOXA3-207ENST00000612286 CALD1Q05682 793 aaKnown RBP17.49■□□□□ 0.39
HOXA3-207ENST00000612286 PRAM1Q96QH2 718 aa17.49■□□□□ 0.39
HOXA3-207ENST00000612286 SMC5Q8IY18 1101 aa17.48■□□□□ 0.39
HOXA3-207ENST00000612286 MIS18AQ9NYP9 233 aa17.48■□□□□ 0.39
HOXA3-207ENST00000612286 EIF2AK4Q9P2K8 1649 aaKnown RBP17.48■□□□□ 0.39
HOXA3-207ENST00000612286 RRS1Q15050 365 aaKnown RBP17.47■□□□□ 0.39
HOXA3-207ENST00000612286 LARP6Q9BRS8 491 aaKnown RBP17.47■□□□□ 0.39
HOXA3-207ENST00000612286 GDPD2Q9HCC8 539 aa17.47■□□□□ 0.39
HOXA3-207ENST00000612286 PTPRTO14522 1441 aa17.47■□□□□ 0.39
HOXA3-207ENST00000612286 PTMAP06454 111 aaKnown RBP17.47■□□□□ 0.39
HOXA3-207ENST00000612286 ERCC6L2Q5T890 1561 aa17.47■□□□□ 0.39
HOXA3-207ENST00000612286 EMILIN1Q9Y6C2 1016 aa17.47■□□□□ 0.39
HOXA3-207ENST00000612286 BAG4O95429 457 aaKnown RBP17.46■□□□□ 0.39
HOXA3-207ENST00000612286 HDAC1Q13547 482 aaPredicted RBP17.46■□□□□ 0.39
HOXA3-207ENST00000612286 ABCC2Q92887 1545 aa17.46■□□□□ 0.39
HOXA3-207ENST00000612286 NINLQ9Y2I6 1382 aa17.46■□□□□ 0.39
HOXA3-207ENST00000612286 AK9Q5TCS8 1911 aa17.46■□□□□ 0.39
HOXA3-207ENST00000612286 MAST1Q9Y2H9 1570 aa17.46■□□□□ 0.39
HOXA3-207ENST00000612286 DUOX2Q9NRD8 1548 aa17.45■□□□□ 0.38
HOXA3-207ENST00000612286 DNTTIP2Q5QJE6 756 aaKnown RBP17.45■□□□□ 0.38
HOXA3-207ENST00000612286 ARHGEF5Q12774 1597 aa17.45■□□□□ 0.38
HOXA3-207ENST00000612286 VIRMAQ69YN4 1812 aaKnown RBP17.45■□□□□ 0.38
HOXA3-207ENST00000612286 FYB1O15117 783 aa17.45■□□□□ 0.38
HOXA3-207ENST00000612286 JARID2Q92833 1246 aaPredicted RBP17.45■□□□□ 0.38
HOXA3-207ENST00000612286 FAM177BA6PVY3 158 aa17.45■□□□□ 0.38
HOXA3-207ENST00000612286 RAB3GAP1Q15042 981 aa17.45■□□□□ 0.38
HOXA3-207ENST00000612286 KIF2CQ99661 725 aa17.45■□□□□ 0.38
HOXA3-207ENST00000612286 PRDM10Q9NQV6 1147 aa17.45■□□□□ 0.38
HOXA3-207ENST00000612286 NCKAP5LQ9HCH0 1330 aa17.45■□□□□ 0.38
HOXA3-207ENST00000612286 NGEFQ8N5V2 710 aa17.44■□□□□ 0.38
HOXA3-207ENST00000612286 SYCE3A1L190 88 aa17.44■□□□□ 0.38
HOXA3-207ENST00000612286 RAPGEF3O95398 923 aa17.43■□□□□ 0.38
HOXA3-207ENST00000612286 WAPLQ7Z5K2 1190 aa17.43■□□□□ 0.38
HOXA3-207ENST00000612286 C8orf58Q8NAV2 365 aa17.43■□□□□ 0.38
HOXA3-207ENST00000612286 SIRT2Q8IXJ6 389 aa17.43■□□□□ 0.38
HOXA3-207ENST00000612286 TSC1Q92574 1164 aa17.43■□□□□ 0.38
HOXA3-207ENST00000612286 KIF16BQ96L93 1317 aa17.43■□□□□ 0.38
HOXA3-207ENST00000612286 MLECQ14165 292 aa17.43■□□□□ 0.38
HOXA3-207ENST00000612286 LAMC1P11047 1609 aa17.43■□□□□ 0.38
HOXA3-207ENST00000612286 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
HOXA3-207ENST00000612286 PRIM1P49642 420 aaKnown RBP17.42■□□□□ 0.38
HOXA3-207ENST00000612286 CLASP1Q7Z460 1538 aa17.42■□□□□ 0.38
HOXA3-207ENST00000612286 TWISTNBQ3B726 338 aaPredicted RBP17.42■□□□□ 0.38
HOXA3-207ENST00000612286 GSPT1P15170 499 aaKnown RBP17.41■□□□□ 0.38
HOXA3-207ENST00000612286 ZNF830Q96NB3 372 aaPredicted RBP17.41■□□□□ 0.38
HOXA3-207ENST00000612286 NSFL1CQ9UNZ2 370 aaKnown RBP17.41■□□□□ 0.38
HOXA3-207ENST00000612286 CD109Q6YHK3 1445 aa17.41■□□□□ 0.38
HOXA3-207ENST00000612286 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
HOXA3-207ENST00000612286 CLTCL1P53675 1640 aa17.41■□□□□ 0.38
HOXA3-207ENST00000612286 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
HOXA3-207ENST00000612286 RBSNQ9H1K0 784 aa17.4■□□□□ 0.38
HOXA3-207ENST00000612286 C14orf93Q9H972 538 aaKnown RBP17.4■□□□□ 0.38
HOXA3-207ENST00000612286 RTEL1-TNFRSF6BF6WH68 1400 aa17.4■□□□□ 0.38
HOXA3-207ENST00000612286 PLEKHF1Q96S99 279 aa17.4■□□□□ 0.38
HOXA3-207ENST00000612286 A0A1W2PP64 1363 aa17.4■□□□□ 0.38
HOXA3-207ENST00000612286 ZBTB7BO15156 539 aaPredicted RBP17.39■□□□□ 0.37
HOXA3-207ENST00000612286 CDC45O75419 566 aa17.39■□□□□ 0.37
HOXA3-207ENST00000612286 MBIPQ9NS73 344 aa17.39■□□□□ 0.37
HOXA3-207ENST00000612286 PREX2Q70Z35 1606 aa17.39■□□□□ 0.37
HOXA3-207ENST00000612286 RBM25P49756 843 aaKnown RBP17.39■□□□□ 0.37
HOXA3-207ENST00000612286 BMP2KLQ5H9B9 411 aa17.39■□□□□ 0.37
HOXA3-207ENST00000612286 KDM5AP29375 1690 aaKnown RBP17.39■□□□□ 0.37
HOXA3-207ENST00000612286 PLCH2O75038 1416 aa17.39■□□□□ 0.37
HOXA3-207ENST00000612286 F6X3S4 739 aa17.39■□□□□ 0.37
HOXA3-207ENST00000612286 RILPL2Q969X0 211 aa17.39■□□□□ 0.37
HOXA3-207ENST00000612286 MAP4K4O95819 1239 aaPredicted RBP17.38■□□□□ 0.37
HOXA3-207ENST00000612286 ZSCAN23Q3MJ62 389 aa17.38■□□□□ 0.37
HOXA3-207ENST00000612286 UPF3BQ9BZI7 483 aaKnown RBP17.38■□□□□ 0.37
HOXA3-207ENST00000612286 TERF2IPQ9NYB0 399 aa17.38■□□□□ 0.37
HOXA3-207ENST00000612286 MCM10Q7L590 875 aa17.38■□□□□ 0.37
HOXA3-207ENST00000612286 TRIM6-TRIM34B2RNG4 842 aa17.37■□□□□ 0.37
HOXA3-207ENST00000612286 RRP9O43818 475 aaKnown RBP17.37■□□□□ 0.37
HOXA3-207ENST00000612286 NEK4P51957 841 aa17.37■□□□□ 0.37
HOXA3-207ENST00000612286 HDGFL2Q7Z4V5 671 aaPredicted RBP17.37■□□□□ 0.37
HOXA3-207ENST00000612286 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.37■□□□□ 0.37
HOXA3-207ENST00000612286 CCDC27Q2M243 656 aa17.37■□□□□ 0.37
HOXA3-207ENST00000612286 NME9Q86XW9 330 aa17.37■□□□□ 0.37
HOXA3-207ENST00000612286 C17orf53Q8N3J3 647 aaPredicted RBP17.37■□□□□ 0.37
HOXA3-207ENST00000612286 CDK19Q9BWU1 502 aa17.37■□□□□ 0.37
HOXA3-207ENST00000612286 VAMP4O75379 141 aa17.36■□□□□ 0.37
HOXA3-207ENST00000612286 EXOC6BQ9Y2D4 811 aa17.36■□□□□ 0.37
HOXA3-207ENST00000612286 CHMP3Q9Y3E7 222 aa17.36■□□□□ 0.37
HOXA3-207ENST00000612286 IQGAP3Q86VI3 1631 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms