RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 LRPPRCP42704 1394 aaKnown RBP16.22■□□□□ 0.19
TCF3-220ENST00000611869 GOLGA6L3A6NEY3 463 aa16.21■□□□□ 0.19
TCF3-220ENST00000611869 RAPGEF4Q8WZA2 1011 aa16.21■□□□□ 0.19
TCF3-220ENST00000611869 PLEKHH1Q9ULM0 1364 aa16.21■□□□□ 0.19
TCF3-220ENST00000611869 ZRSR1Q15695 479 aaKnown RBP16.2■□□□□ 0.18
TCF3-220ENST00000611869 MCM10Q7L590 875 aa16.2■□□□□ 0.18
TCF3-220ENST00000611869 TTC5Q8N0Z6 440 aa16.2■□□□□ 0.18
TCF3-220ENST00000611869 MIS18AQ9NYP9 233 aa16.2■□□□□ 0.18
TCF3-220ENST00000611869 ATF3P18847 181 aa16.2■□□□□ 0.18
TCF3-220ENST00000611869 GORABQ5T7V8 394 aa16.2■□□□□ 0.18
TCF3-220ENST00000611869 RBM33Q96EV2 1170 aaKnown RBP16.2■□□□□ 0.18
TCF3-220ENST00000611869 EIF2AK4Q9P2K8 1649 aaKnown RBP16.2■□□□□ 0.18
TCF3-220ENST00000611869 PROSER2Q86WR7 435 aaPredicted RBP16.2■□□□□ 0.18
TCF3-220ENST00000611869 REC8O95072 547 aa16.2■□□□□ 0.18
TCF3-220ENST00000611869 AIMP1Q12904 312 aaKnown RBP16.2■□□□□ 0.18
TCF3-220ENST00000611869 XPCQ01831 940 aaPredicted RBP16.19■□□□□ 0.18
TCF3-220ENST00000611869 AMOTL2Q9Y2J4 779 aa16.19■□□□□ 0.18
TCF3-220ENST00000611869 NEXNQ0ZGT2 675 aa16.19■□□□□ 0.18
TCF3-220ENST00000611869 ANO2Q9NQ90 1003 aa16.19■□□□□ 0.18
TCF3-220ENST00000611869 MAST1Q9Y2H9 1570 aa16.19■□□□□ 0.18
TCF3-220ENST00000611869 TAF7LQ5H9L4 462 aa16.18■□□□□ 0.18
TCF3-220ENST00000611869 NAP1L5Q96NT1 182 aaPredicted RBP16.18■□□□□ 0.18
TCF3-220ENST00000611869 ADGBQ8N7X0 1667 aa16.18■□□□□ 0.18
TCF3-220ENST00000611869 FOXD4L6Q3SYB3 417 aaPredicted RBP16.18■□□□□ 0.18
TCF3-220ENST00000611869 CCDC30Q5VVM6 783 aa16.18■□□□□ 0.18
TCF3-220ENST00000611869 FOXD4L3Q6VB84 417 aaPredicted RBP16.18■□□□□ 0.18
TCF3-220ENST00000611869 ATP7AQ04656 1500 aa16.18■□□□□ 0.18
TCF3-220ENST00000611869 UBTFL1P0CB47 393 aaPredicted RBP16.18■□□□□ 0.18
TCF3-220ENST00000611869 ANKRD36BQ8N2N9 1353 aa16.18■□□□□ 0.18
TCF3-220ENST00000611869 ANKLE2Q86XL3 938 aa16.18■□□□□ 0.18
TCF3-220ENST00000611869 CHMP5Q9NZZ3 219 aa16.18■□□□□ 0.18
TCF3-220ENST00000611869 NSD2O96028 1365 aa16.18■□□□□ 0.18
TCF3-220ENST00000611869 DNTTIP2Q5QJE6 756 aaKnown RBP16.17■□□□□ 0.18
TCF3-220ENST00000611869 INTS3Q68E01 1043 aaKnown RBP16.17■□□□□ 0.18
TCF3-220ENST00000611869 ARHGEF5Q12774 1597 aa16.17■□□□□ 0.18
TCF3-220ENST00000611869 CDC45O75419 566 aa16.16■□□□□ 0.18
TCF3-220ENST00000611869 TRIM27P14373 513 aa16.16■□□□□ 0.18
TCF3-220ENST00000611869 POGZQ7Z3K3 1410 aa16.16■□□□□ 0.18
TCF3-220ENST00000611869 GCC1Q96CN9 775 aa16.16■□□□□ 0.18
TCF3-220ENST00000611869 HDGFL1Q5TGJ6 251 aa16.16■□□□□ 0.18
TCF3-220ENST00000611869 PPP6R1Q9UPN7 881 aa16.16■□□□□ 0.18
TCF3-220ENST00000611869 SAMD9LQ8IVG5 1584 aa16.16■□□□□ 0.18
TCF3-220ENST00000611869 EVA1CP58658 441 aa16.16■□□□□ 0.18
TCF3-220ENST00000611869 SPINK5Q9NQ38 1064 aaPredicted RBP16.16■□□□□ 0.18
TCF3-220ENST00000611869 IGHDP01880 384 aa16.15■□□□□ 0.18
TCF3-220ENST00000611869 PTMSP20962 102 aa16.15■□□□□ 0.18
TCF3-220ENST00000611869 DDX11L8A8MPP1 907 aa16.15■□□□□ 0.18
TCF3-220ENST00000611869 DIAPH3Q9NSV4 1193 aa16.15■□□□□ 0.18
TCF3-220ENST00000611869 CFAP65Q6ZU64 1925 aaKnown RBP16.15■□□□□ 0.18
TCF3-220ENST00000611869 FRAT2O75474 233 aaPredicted RBP16.15■□□□□ 0.18
TCF3-220ENST00000611869 ZNF428Q96B54 188 aa16.15■□□□□ 0.18
TCF3-220ENST00000611869 ABCC11Q96J66 1382 aa16.15■□□□□ 0.18
TCF3-220ENST00000611869 DDX58O95786 925 aaKnown RBP16.14■□□□□ 0.17
TCF3-220ENST00000611869 GNAI3P08754 354 aa16.14■□□□□ 0.17
TCF3-220ENST00000611869 CHD1LQ86WJ1 897 aa16.14■□□□□ 0.17
TCF3-220ENST00000611869 FAM83GA6ND36 823 aa16.14■□□□□ 0.17
TCF3-220ENST00000611869 DDX49Q9Y6V7 483 aaKnown RBP16.14■□□□□ 0.17
TCF3-220ENST00000611869 SURF6O75683 361 aaKnown RBP16.14■□□□□ 0.17
TCF3-220ENST00000611869 IFIT2P09913 472 aaKnown RBP16.14■□□□□ 0.17
TCF3-220ENST00000611869 ZRANB1Q9UGI0 708 aa16.14■□□□□ 0.17
TCF3-220ENST00000611869 ZNF530Q6P9A1 599 aaPredicted RBP16.13■□□□□ 0.17
TCF3-220ENST00000611869 POLR3AO14802 1390 aaPredicted RBP16.13■□□□□ 0.17
TCF3-220ENST00000611869 PLEKHO1Q53GL0 409 aaPredicted RBP16.13■□□□□ 0.17
TCF3-220ENST00000611869 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
TCF3-220ENST00000611869 PIK3C2GO75747 1445 aa16.12■□□□□ 0.17
TCF3-220ENST00000611869 RIC3Q7Z5B4 369 aa16.12■□□□□ 0.17
TCF3-220ENST00000611869 TNNQ9UQP3 1299 aa16.12■□□□□ 0.17
TCF3-220ENST00000611869 TTC37Q6PGP7 1564 aa16.11■□□□□ 0.17
TCF3-220ENST00000611869 GNAI2P04899 355 aa16.11■□□□□ 0.17
TCF3-220ENST00000611869 ACEP12821 1306 aa16.11■□□□□ 0.17
TCF3-220ENST00000611869 G3BP1Q13283 466 aaKnown RBP eCLIP16.11■□□□□ 0.17
TCF3-220ENST00000611869 HSP90B1P14625 803 aaKnown RBP16.1■□□□□ 0.17
TCF3-220ENST00000611869 USHBP1Q8N6Y0 703 aa16.1■□□□□ 0.17
TCF3-220ENST00000611869 ALDH1L2Q3SY69 923 aa16.1■□□□□ 0.17
TCF3-220ENST00000611869 NCKAP5LQ9HCH0 1330 aa16.1■□□□□ 0.17
TCF3-220ENST00000611869 TNRQ92752 1358 aa16.09■□□□□ 0.17
TCF3-220ENST00000611869 A0A1W2PP64 1363 aa16.09■□□□□ 0.17
TCF3-220ENST00000611869 POLKQ9UBT6 870 aa16.09■□□□□ 0.17
TCF3-220ENST00000611869 PCDHB15Q9Y5E8 787 aa16.09■□□□□ 0.17
TCF3-220ENST00000611869 RIMS2Q9UQ26 1411 aa16.08■□□□□ 0.17
TCF3-220ENST00000611869 MSNP26038 577 aaKnown RBP16.08■□□□□ 0.17
TCF3-220ENST00000611869 CCT4P50991 539 aaKnown RBP16.08■□□□□ 0.16
TCF3-220ENST00000611869 DMRT2Q9Y5R5 561 aa16.08■□□□□ 0.16
TCF3-220ENST00000611869 ERCC6L2Q5T890 1561 aa16.08■□□□□ 0.16
TCF3-220ENST00000611869 UHRF1BP1LA0JNW5 1464 aa16.08■□□□□ 0.16
TCF3-220ENST00000611869 MYO5CQ9NQX4 1742 aa16.08■□□□□ 0.16
TCF3-220ENST00000611869 ZC3H6P61129 1189 aaKnown RBP16.08■□□□□ 0.16
TCF3-220ENST00000611869 HSP90AB2PQ58FF8 381 aa16.08■□□□□ 0.16
TCF3-220ENST00000611869 SYTL4Q96C24 671 aaPredicted RBP16.07■□□□□ 0.16
TCF3-220ENST00000611869 MBIPQ9NS73 344 aa16.07■□□□□ 0.16
TCF3-220ENST00000611869 ATP10AO60312 1499 aa16.07■□□□□ 0.16
TCF3-220ENST00000611869 FOXO3O43524 673 aa16.07■□□□□ 0.16
TCF3-220ENST00000611869 HSP90AB4PQ58FF6 505 aa16.07■□□□□ 0.16
TCF3-220ENST00000611869 RUFY2Q8WXA3 655 aa16.07■□□□□ 0.16
TCF3-220ENST00000611869 GNAT3A8MTJ3 354 aa16.06■□□□□ 0.16
TCF3-220ENST00000611869 SYAP1Q96A49 352 aaPredicted RBP16.06■□□□□ 0.16
TCF3-220ENST00000611869 PUS7Q96PZ0 661 aaKnown RBP16.06■□□□□ 0.16
TCF3-220ENST00000611869 F6X3S4 739 aa16.06■□□□□ 0.16
TCF3-220ENST00000611869 RLBP1P12271 317 aa16.06■□□□□ 0.16
TCF3-220ENST00000611869 NPATQ14207 1427 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms