RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 BRINP3Q76B58 766 aa30.06■■■□□ 2.4
UBE3C-209ENST00000611269 KIF20BQ96Q89 1820 aa30.05■■■□□ 2.4
UBE3C-209ENST00000611269 SSH2Q76I76 1423 aa30.05■■■□□ 2.4
UBE3C-209ENST00000611269 PSME1Q06323 249 aa30.04■■■□□ 2.4
UBE3C-209ENST00000611269 RALBP1Q15311 655 aa30.04■■■□□ 2.4
UBE3C-209ENST00000611269 TTC21BQ7Z4L5 1316 aa30.03■■■□□ 2.4
UBE3C-209ENST00000611269 FYB1O15117 783 aa30.02■■■□□ 2.4
UBE3C-209ENST00000611269 HNRNPUQ00839 825 aaKnown RBP eCLIP30.02■■■□□ 2.4
UBE3C-209ENST00000611269 IQSEC2Q5JU85 1478 aa30.01■■■□□ 2.4
UBE3C-209ENST00000611269 XPCQ01831 940 aaPredicted RBP30.01■■■□□ 2.39
UBE3C-209ENST00000611269 DDX17Q92841 729 aaKnown RBP30.01■■■□□ 2.39
UBE3C-209ENST00000611269 CERKQ8TCT0 537 aa30■■■□□ 2.39
UBE3C-209ENST00000611269 NSD2O96028 1365 aa30■■■□□ 2.39
UBE3C-209ENST00000611269 PARD3Q8TEW0 1356 aa30■■■□□ 2.39
UBE3C-209ENST00000611269 NME9Q86XW9 330 aa29.99■■■□□ 2.39
UBE3C-209ENST00000611269 GGNBP2Q9H3C7 697 aa29.99■■■□□ 2.39
UBE3C-209ENST00000611269 ANKRD26Q9UPS8 1709 aa29.98■■■□□ 2.39
UBE3C-209ENST00000611269 NPHP3Q7Z494 1330 aa29.98■■■□□ 2.39
UBE3C-209ENST00000611269 TTC21AQ8NDW8 1320 aa29.97■■■□□ 2.39
UBE3C-209ENST00000611269 PAK3O75914 559 aaPredicted RBP29.97■■■□□ 2.39
UBE3C-209ENST00000611269 KRT28Q7Z3Y7 464 aa29.97■■■□□ 2.39
UBE3C-209ENST00000611269 FAM9BQ8IZU0 186 aa29.97■■■□□ 2.39
UBE3C-209ENST00000611269 ROBO1Q9Y6N7 1651 aa29.96■■■□□ 2.39
UBE3C-209ENST00000611269 BRD4O60885 1362 aaPredicted RBP29.96■■■□□ 2.39
UBE3C-209ENST00000611269 TRPM3Q9HCF6 1732 aaPredicted RBP29.96■■■□□ 2.39
UBE3C-209ENST00000611269 TOM1O60784 492 aa29.95■■■□□ 2.39
UBE3C-209ENST00000611269 ZRANB1Q9UGI0 708 aa29.95■■■□□ 2.38
UBE3C-209ENST00000611269 PIK3C2AO00443 1686 aa29.94■■■□□ 2.38
UBE3C-209ENST00000611269 MYBBP1AQ9BQG0 1328 aaKnown RBP29.94■■■□□ 2.38
UBE3C-209ENST00000611269 MORC1Q86VD1 984 aa29.93■■■□□ 2.38
UBE3C-209ENST00000611269 PXDNQ92626 1479 aa29.92■■■□□ 2.38
UBE3C-209ENST00000611269 NHSL1Q5SYE7 1610 aa29.92■■■□□ 2.38
UBE3C-209ENST00000611269 UBAP1LF5GYI3 381 aa29.92■■■□□ 2.38
UBE3C-209ENST00000611269 ABTB2Q8N961 1025 aa29.89■■■□□ 2.38
UBE3C-209ENST00000611269 COG3Q96JB2 828 aa29.89■■■□□ 2.37
UBE3C-209ENST00000611269 TNNT2P45379 298 aaPredicted RBP29.88■■■□□ 2.37
UBE3C-209ENST00000611269 PIP4K2BP78356 416 aa29.88■■■□□ 2.37
UBE3C-209ENST00000611269 OVOS2A0A0J9YW53 1432 aa29.87■■■□□ 2.37
UBE3C-209ENST00000611269 OVOS2Q6IE36 1432 aa29.87■■■□□ 2.37
UBE3C-209ENST00000611269 NUTM2GQ5VZR2 741 aa29.87■■■□□ 2.37
UBE3C-209ENST00000611269 PNISRQ8TF01 805 aaKnown RBP29.87■■■□□ 2.37
UBE3C-209ENST00000611269 SOS2Q07890 1332 aaPredicted RBP29.86■■■□□ 2.37
UBE3C-209ENST00000611269 SBNO1A3KN83 1393 aa29.86■■■□□ 2.37
UBE3C-209ENST00000611269 ALS2Q96Q42 1657 aa29.86■■■□□ 2.37
UBE3C-209ENST00000611269 USP31Q70CQ4 1352 aa29.85■■■□□ 2.37
UBE3C-209ENST00000611269 MARF1Q9Y4F3 1742 aaKnown RBP29.85■■■□□ 2.37
UBE3C-209ENST00000611269 NLRP6P59044 892 aa29.85■■■□□ 2.37
UBE3C-209ENST00000611269 USP54Q70EL1 1684 aa29.84■■■□□ 2.37
UBE3C-209ENST00000611269 PPP2R1AP30153 589 aa29.84■■■□□ 2.37
UBE3C-209ENST00000611269 LMOD2Q6P5Q4 547 aa29.84■■■□□ 2.37
UBE3C-209ENST00000611269 ZBED9Q6R2W3 1325 aa29.83■■■□□ 2.37
UBE3C-209ENST00000611269 AHDC1Q5TGY3 1603 aaPredicted RBP29.82■■■□□ 2.37
UBE3C-209ENST00000611269 TNS3Q68CZ2 1445 aa29.82■■■□□ 2.37
UBE3C-209ENST00000611269 SUPT16HQ9Y5B9 1047 aaKnown RBP29.82■■■□□ 2.36
UBE3C-209ENST00000611269 NLRP13Q86W25 1043 aa29.81■■■□□ 2.36
UBE3C-209ENST00000611269 SPATA31A3Q5VYP0 1347 aa29.8■■■□□ 2.36
UBE3C-209ENST00000611269 FBLN1P23142 703 aa29.78■■■□□ 2.36
UBE3C-209ENST00000611269 PHLPP1O60346 1717 aa29.75■■■□□ 2.35
UBE3C-209ENST00000611269 SOX12O15370 315 aa29.75■■■□□ 2.35
UBE3C-209ENST00000611269 MAP2P11137 1827 aaKnown RBP29.75■■■□□ 2.35
UBE3C-209ENST00000611269 ARHGEF10O15013 1369 aa29.74■■■□□ 2.35
UBE3C-209ENST00000611269 PLEKHG5O94827 1062 aa29.74■■■□□ 2.35
UBE3C-209ENST00000611269 AATKQ6ZMQ8 1374 aa29.72■■■□□ 2.35
UBE3C-209ENST00000611269 MTHFSP49914 203 aa29.71■■■□□ 2.35
UBE3C-209ENST00000611269 USP19O94966 1318 aa29.71■■■□□ 2.35
UBE3C-209ENST00000611269 MED1Q15648 1581 aaPredicted RBP29.7■■■□□ 2.35
UBE3C-209ENST00000611269 COL16A1Q07092 1604 aaPredicted RBP29.7■■■□□ 2.35
UBE3C-209ENST00000611269 SLIT3O75094 1523 aa29.7■■■□□ 2.34
UBE3C-209ENST00000611269 RRS1Q15050 365 aaKnown RBP29.7■■■□□ 2.34
UBE3C-209ENST00000611269 POLKQ9UBT6 870 aa29.69■■■□□ 2.34
UBE3C-209ENST00000611269 LRRC59Q96AG4 307 aaKnown RBP29.68■■■□□ 2.34
UBE3C-209ENST00000611269 NFAT5O94916 1531 aa29.67■■■□□ 2.34
UBE3C-209ENST00000611269 CRYBG1Q9Y4K1 1723 aa29.67■■■□□ 2.34
UBE3C-209ENST00000611269 EMILIN1Q9Y6C2 1016 aa29.67■■■□□ 2.34
UBE3C-209ENST00000611269 PHRF1Q9P1Y6 1649 aaKnown RBP29.66■■■□□ 2.34
UBE3C-209ENST00000611269 KCNH5Q8NCM2 988 aa29.65■■■□□ 2.34
UBE3C-209ENST00000611269 CABLES1Q8TDN4 633 aa29.65■■■□□ 2.34
UBE3C-209ENST00000611269 PPM1GO15355 546 aaPredicted RBP29.65■■■□□ 2.34
UBE3C-209ENST00000611269 GCP02774 474 aa29.65■■■□□ 2.34
UBE3C-209ENST00000611269 SMG6Q86US8 1419 aaKnown RBP29.64■■■□□ 2.34
UBE3C-209ENST00000611269 NEFLP07196 543 aa29.64■■■□□ 2.34
UBE3C-209ENST00000611269 INSRP06213 1382 aa29.63■■■□□ 2.33
UBE3C-209ENST00000611269 FKBP8Q14318 412 aa29.63■■■□□ 2.33
UBE3C-209ENST00000611269 MAP3K19Q56UN5 1328 aa29.62■■■□□ 2.33
UBE3C-209ENST00000611269 LTN1O94822 1766 aa29.62■■■□□ 2.33
UBE3C-209ENST00000611269 PEAK1Q9H792 1746 aa29.61■■■□□ 2.33
UBE3C-209ENST00000611269 ABCA3Q99758 1704 aa29.6■■■□□ 2.33
UBE3C-209ENST00000611269 CDK12Q9NYV4 1490 aaPredicted RBP29.59■■■□□ 2.33
UBE3C-209ENST00000611269 CFAP53Q96M91 514 aa29.59■■■□□ 2.33
UBE3C-209ENST00000611269 PNPLA6Q8IY17 1366 aa29.59■■■□□ 2.33
UBE3C-209ENST00000611269 COL22A1Q8NFW1 1626 aaPredicted RBP29.57■■■□□ 2.32
UBE3C-209ENST00000611269 COL3A1P02461 1466 aaPredicted RBP29.56■■■□□ 2.32
UBE3C-209ENST00000611269 AMPHP49418 695 aa29.55■■■□□ 2.32
UBE3C-209ENST00000611269 ZC3H6P61129 1189 aaKnown RBP29.55■■■□□ 2.32
UBE3C-209ENST00000611269 ZBTB7CA1YPR0 619 aa29.54■■■□□ 2.32
UBE3C-209ENST00000611269 ARHGEF25Q86VW2 580 aa29.54■■■□□ 2.32
UBE3C-209ENST00000611269 SHPRHQ149N8 1683 aa29.53■■■□□ 2.32
UBE3C-209ENST00000611269 FLT4P35916 1363 aa29.53■■■□□ 2.32
UBE3C-209ENST00000611269 HAP1P54257 671 aaPredicted RBP29.53■■■□□ 2.32
UBE3C-209ENST00000611269 KIF24Q5T7B8 1368 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms