RNA–Protein interactions for RNA: ENST00000611138.1

FAM228B-206, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228B, Length 362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-206ENST00000611138 FBXO41Q8TF61 875 aa11.99□□□□□ -0.49
FAM228B-206ENST00000611138 KIF7Q2M1P5 1343 aa11.99□□□□□ -0.49
FAM228B-206ENST00000611138 PXDNQ92626 1479 aa11.99□□□□□ -0.49
FAM228B-206ENST00000611138 ALS2Q96Q42 1657 aa11.99□□□□□ -0.49
FAM228B-206ENST00000611138 CD163L1Q9NR16 1453 aa11.98□□□□□ -0.49
FAM228B-206ENST00000611138 CCDC7Q96M83 1385 aa11.98□□□□□ -0.49
FAM228B-206ENST00000611138 ACEP12821 1306 aa11.98□□□□□ -0.49
FAM228B-206ENST00000611138 FOXO3O43524 673 aa11.98□□□□□ -0.49
FAM228B-206ENST00000611138 POLR3AO14802 1390 aaPredicted RBP11.97□□□□□ -0.49
FAM228B-206ENST00000611138 NINLQ9Y2I6 1382 aa11.97□□□□□ -0.49
FAM228B-206ENST00000611138 WASHC2AQ641Q2 1341 aa11.97□□□□□ -0.49
FAM228B-206ENST00000611138 NPHP3Q7Z494 1330 aa11.97□□□□□ -0.49
FAM228B-206ENST00000611138 PUS7Q96PZ0 661 aaKnown RBP11.97□□□□□ -0.49
FAM228B-206ENST00000611138 SLC12A5Q9H2X9 1139 aa11.97□□□□□ -0.49
FAM228B-206ENST00000611138 ABCA3Q99758 1704 aa11.97□□□□□ -0.49
FAM228B-206ENST00000611138 PIK3C2AO00443 1686 aa11.97□□□□□ -0.49
FAM228B-206ENST00000611138 SHPRHQ149N8 1683 aa11.97□□□□□ -0.49
FAM228B-206ENST00000611138 A0A1W2PP64 1363 aa11.96□□□□□ -0.49
FAM228B-206ENST00000611138 PLEKHG3A1L390 1219 aa11.96□□□□□ -0.49
FAM228B-206ENST00000611138 PSME1Q06323 249 aa11.96□□□□□ -0.49
FAM228B-206ENST00000611138 USP6P35125 1406 aa11.95□□□□□ -0.5
FAM228B-206ENST00000611138 KTN1Q86UP2 1357 aaKnown RBP11.95□□□□□ -0.5
FAM228B-206ENST00000611138 MARF1Q9Y4F3 1742 aaKnown RBP11.95□□□□□ -0.5
FAM228B-206ENST00000611138 HSPA1LP34931 641 aa11.95□□□□□ -0.5
FAM228B-206ENST00000611138 KRT28Q7Z3Y7 464 aa11.95□□□□□ -0.5
FAM228B-206ENST00000611138 CPSF1Q10570 1443 aaKnown RBP11.94□□□□□ -0.5
FAM228B-206ENST00000611138 CRYBG1Q9Y4K1 1723 aa11.94□□□□□ -0.5
FAM228B-206ENST00000611138 ANKRD36BQ8N2N9 1353 aa11.94□□□□□ -0.5
FAM228B-206ENST00000611138 PHRF1Q9P1Y6 1649 aaKnown RBP11.94□□□□□ -0.5
FAM228B-206ENST00000611138 LHX8Q68G74 356 aa11.94□□□□□ -0.5
FAM228B-206ENST00000611138 HDGFL2Q7Z4V5 671 aaPredicted RBP11.94□□□□□ -0.5
FAM228B-206ENST00000611138 ANKRD26Q9UPS8 1709 aa11.94□□□□□ -0.5
FAM228B-206ENST00000611138 TNS3Q68CZ2 1445 aa11.94□□□□□ -0.5
FAM228B-206ENST00000611138 COL22A1Q8NFW1 1626 aaPredicted RBP11.93□□□□□ -0.5
FAM228B-206ENST00000611138 SOS2Q07890 1332 aaPredicted RBP11.93□□□□□ -0.5
FAM228B-206ENST00000611138 NPM3O75607 178 aaKnown RBP11.93□□□□□ -0.5
FAM228B-206ENST00000611138 PAK3O75914 559 aaPredicted RBP11.93□□□□□ -0.5
FAM228B-206ENST00000611138 TERF2IPQ9NYB0 399 aa11.93□□□□□ -0.5
FAM228B-206ENST00000611138 USP54Q70EL1 1684 aa11.92□□□□□ -0.5
FAM228B-206ENST00000611138 LMOD2Q6P5Q4 547 aa11.91□□□□□ -0.5
FAM228B-206ENST00000611138 EDC4Q6P2E9 1401 aaKnown RBP11.91□□□□□ -0.5
FAM228B-206ENST00000611138 NSD3Q9BZ95 1437 aa11.91□□□□□ -0.5
FAM228B-206ENST00000611138 SBNO1A3KN83 1393 aa11.91□□□□□ -0.5
FAM228B-206ENST00000611138 ZNF316A6NFI3 1004 aaPredicted RBP11.9□□□□□ -0.5
FAM228B-206ENST00000611138 PLEKHG5O94827 1062 aa11.9□□□□□ -0.5
FAM228B-206ENST00000611138 SSH2Q76I76 1423 aa11.9□□□□□ -0.5
FAM228B-206ENST00000611138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.9□□□□□ -0.5
FAM228B-206ENST00000611138 ZNF692Q9BU19 519 aaPredicted RBP11.9□□□□□ -0.5
FAM228B-206ENST00000611138 SPATA31A3Q5VYP0 1347 aa11.89□□□□□ -0.51
FAM228B-206ENST00000611138 MED1Q15648 1581 aaPredicted RBP11.89□□□□□ -0.51
FAM228B-206ENST00000611138 ILDR1Q86SU0 546 aaPredicted RBP11.89□□□□□ -0.51
FAM228B-206ENST00000611138 LRRC59Q96AG4 307 aaKnown RBP11.89□□□□□ -0.51
FAM228B-206ENST00000611138 PANK3Q9H999 370 aa11.89□□□□□ -0.51
FAM228B-206ENST00000611138 PNPLA6Q8IY17 1366 aa11.89□□□□□ -0.51
FAM228B-206ENST00000611138 TTC21BQ7Z4L5 1316 aa11.88□□□□□ -0.51
FAM228B-206ENST00000611138 LTN1O94822 1766 aa11.88□□□□□ -0.51
FAM228B-206ENST00000611138 NUTM2GQ5VZR2 741 aa11.88□□□□□ -0.51
FAM228B-206ENST00000611138 CARD14Q9BXL6 1004 aa11.88□□□□□ -0.51
FAM228B-206ENST00000611138 ARHGEF10O15013 1369 aa11.88□□□□□ -0.51
FAM228B-206ENST00000611138 BRD4O60885 1362 aaPredicted RBP11.88□□□□□ -0.51
FAM228B-206ENST00000611138 JCADQ9P266 1359 aa11.88□□□□□ -0.51
FAM228B-206ENST00000611138 ABTB2Q8N961 1025 aa11.87□□□□□ -0.51
FAM228B-206ENST00000611138 TTC21AQ8NDW8 1320 aa11.86□□□□□ -0.51
FAM228B-206ENST00000611138 EVX2Q03828 476 aa11.86□□□□□ -0.51
FAM228B-206ENST00000611138 NME9Q86XW9 330 aa11.86□□□□□ -0.51
FAM228B-206ENST00000611138 DDX10Q13206 875 aaKnown RBP11.85□□□□□ -0.51
FAM228B-206ENST00000611138 AKT1S1Q96B36 256 aa11.85□□□□□ -0.51
FAM228B-206ENST00000611138 ZRANB1Q9UGI0 708 aa11.85□□□□□ -0.51
FAM228B-206ENST00000611138 SLIT3O75094 1523 aa11.85□□□□□ -0.51
FAM228B-206ENST00000611138 PLCH1Q4KWH8 1693 aa11.84□□□□□ -0.51
FAM228B-206ENST00000611138 NLRP6P59044 892 aa11.84□□□□□ -0.51
FAM228B-206ENST00000611138 CABLES1Q8TDN4 633 aa11.84□□□□□ -0.51
FAM228B-206ENST00000611138 LRP6O75581 1613 aa11.84□□□□□ -0.51
FAM228B-206ENST00000611138 OVOS2A0A0J9YW53 1432 aa11.84□□□□□ -0.51
FAM228B-206ENST00000611138 OVOS2Q6IE36 1432 aa11.84□□□□□ -0.51
FAM228B-206ENST00000611138 RGPD5Q99666 1765 aa11.83□□□□□ -0.52
FAM228B-206ENST00000611138 NUTM2BA6NNL0 878 aaPredicted RBP11.83□□□□□ -0.52
FAM228B-206ENST00000611138 NUTM2EB1AL46 878 aaPredicted RBP11.83□□□□□ -0.52
FAM228B-206ENST00000611138 CNGB1Q14028 1251 aaPredicted RBP11.83□□□□□ -0.52
FAM228B-206ENST00000611138 NUTM2AQ8IVF1 878 aaPredicted RBP11.83□□□□□ -0.52
FAM228B-206ENST00000611138 GGNBP2Q9H3C7 697 aa11.83□□□□□ -0.52
FAM228B-206ENST00000611138 KNSTRNQ9Y448 316 aa11.83□□□□□ -0.52
FAM228B-206ENST00000611138 MAP2P11137 1827 aaKnown RBP11.83□□□□□ -0.52
FAM228B-206ENST00000611138 CGNL1Q0VF96 1302 aa11.83□□□□□ -0.52
FAM228B-206ENST00000611138 NFAT5O94916 1531 aa11.82□□□□□ -0.52
FAM228B-206ENST00000611138 SOX12O15370 315 aa11.82□□□□□ -0.52
FAM228B-206ENST00000611138 HAP1P54257 671 aaPredicted RBP11.82□□□□□ -0.52
FAM228B-206ENST00000611138 USP31Q70CQ4 1352 aa11.81□□□□□ -0.52
FAM228B-206ENST00000611138 FYB1O15117 783 aa11.81□□□□□ -0.52
FAM228B-206ENST00000611138 NLRP13Q86W25 1043 aa11.81□□□□□ -0.52
FAM228B-206ENST00000611138 COL14A1Q05707 1796 aaKnown RBP11.81□□□□□ -0.52
FAM228B-206ENST00000611138 USP19O94966 1318 aa11.81□□□□□ -0.52
FAM228B-206ENST00000611138 SPATA31A6Q5VVP1 1343 aa11.81□□□□□ -0.52
FAM228B-206ENST00000611138 PER1O15534 1290 aaPredicted RBP11.8□□□□□ -0.52
FAM228B-206ENST00000611138 COG3Q96JB2 828 aa11.8□□□□□ -0.52
FAM228B-206ENST00000611138 NSD2O96028 1365 aa11.79□□□□□ -0.52
FAM228B-206ENST00000611138 ZBTB7CA1YPR0 619 aa11.79□□□□□ -0.52
FAM228B-206ENST00000611138 ADAMTS2O95450 1211 aa11.79□□□□□ -0.52
FAM228B-206ENST00000611138 CC2D1BQ5T0F9 858 aaKnown RBP11.79□□□□□ -0.52
FAM228B-206ENST00000611138 NWD2Q9ULI1 1742 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms