RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 POLKQ9UBT6 870 aa24.15■■□□□ 1.46
SNAPC3-207ENST00000610884 SPINK5Q9NQ38 1064 aaPredicted RBP24.13■■□□□ 1.45
SNAPC3-207ENST00000610884 XPCQ01831 940 aaPredicted RBP24.13■■□□□ 1.45
SNAPC3-207ENST00000610884 PTCH1Q13635 1447 aa24.13■■□□□ 1.45
SNAPC3-207ENST00000610884 CFAP53Q96M91 514 aa24.12■■□□□ 1.45
SNAPC3-207ENST00000610884 PAK3O75914 559 aaPredicted RBP24.12■■□□□ 1.45
SNAPC3-207ENST00000610884 USP32Q8NFA0 1604 aa24.12■■□□□ 1.45
SNAPC3-207ENST00000610884 TTC21BQ7Z4L5 1316 aa24.12■■□□□ 1.45
SNAPC3-207ENST00000610884 NSD2O96028 1365 aa24.11■■□□□ 1.45
SNAPC3-207ENST00000610884 COG3Q96JB2 828 aa24.11■■□□□ 1.45
SNAPC3-207ENST00000610884 XRN1Q8IZH2 1706 aaKnown RBP24.11■■□□□ 1.45
SNAPC3-207ENST00000610884 DIP2AQ14689 1571 aa24.1■■□□□ 1.45
SNAPC3-207ENST00000610884 PLEKHG3A1L390 1219 aa24.1■■□□□ 1.45
SNAPC3-207ENST00000610884 PROSER2Q86WR7 435 aaPredicted RBP24.1■■□□□ 1.45
SNAPC3-207ENST00000610884 EDC4Q6P2E9 1401 aaKnown RBP24.1■■□□□ 1.45
SNAPC3-207ENST00000610884 ZNF692Q9BU19 519 aaPredicted RBP24.09■■□□□ 1.45
SNAPC3-207ENST00000610884 ESCO1Q5FWF5 840 aa24.09■■□□□ 1.45
SNAPC3-207ENST00000610884 CDC42BPGQ6DT37 1551 aa24.08■■□□□ 1.45
SNAPC3-207ENST00000610884 SMG6Q86US8 1419 aaKnown RBP24.08■■□□□ 1.45
SNAPC3-207ENST00000610884 ORAI2Q96SN7 254 aa24.08■■□□□ 1.45
SNAPC3-207ENST00000610884 CHD2O14647 1828 aaKnown RBP24.07■■□□□ 1.44
SNAPC3-207ENST00000610884 HMOX1P09601 288 aa24.07■■□□□ 1.44
SNAPC3-207ENST00000610884 TCP11L2Q8N4U5 519 aa24.07■■□□□ 1.44
SNAPC3-207ENST00000610884 SHPRHQ149N8 1683 aa24.06■■□□□ 1.44
SNAPC3-207ENST00000610884 PIK3R4Q99570 1358 aa24.04■■□□□ 1.44
SNAPC3-207ENST00000610884 KIF20BQ96Q89 1820 aa24.04■■□□□ 1.44
SNAPC3-207ENST00000610884 ADGRB2O60241 1585 aa24.04■■□□□ 1.44
SNAPC3-207ENST00000610884 USP6P35125 1406 aa24.04■■□□□ 1.44
SNAPC3-207ENST00000610884 DIAPH1O60610 1272 aaKnown RBP24.04■■□□□ 1.44
SNAPC3-207ENST00000610884 RBM19Q9Y4C8 960 aaKnown RBP24.03■■□□□ 1.44
SNAPC3-207ENST00000610884 FOXO3O43524 673 aa24.03■■□□□ 1.44
SNAPC3-207ENST00000610884 PLIN1O60240 522 aa24.03■■□□□ 1.44
SNAPC3-207ENST00000610884 MAP2P11137 1827 aaKnown RBP24.02■■□□□ 1.44
SNAPC3-207ENST00000610884 DDX17Q92841 729 aaKnown RBP24.02■■□□□ 1.44
SNAPC3-207ENST00000610884 NALCNQ8IZF0 1738 aa24.01■■□□□ 1.43
SNAPC3-207ENST00000610884 ITSN1Q15811 1721 aa24.01■■□□□ 1.43
SNAPC3-207ENST00000610884 RUNDC1Q96C34 613 aa24.01■■□□□ 1.43
SNAPC3-207ENST00000610884 NLRP6P59044 892 aa24■■□□□ 1.43
SNAPC3-207ENST00000610884 PHF8Q9UPP1 1060 aa24■■□□□ 1.43
SNAPC3-207ENST00000610884 GOLGA2Q08379 1002 aa23.99■■□□□ 1.43
SNAPC3-207ENST00000610884 HSP90AB2PQ58FF8 381 aa23.99■■□□□ 1.43
SNAPC3-207ENST00000610884 ABTB2Q8N961 1025 aa23.99■■□□□ 1.43
SNAPC3-207ENST00000610884 ZNF521Q96K83 1311 aa23.98■■□□□ 1.43
SNAPC3-207ENST00000610884 AKAP12Q02952 1782 aa23.98■■□□□ 1.43
SNAPC3-207ENST00000610884 MON2Q7Z3U7 1717 aa23.98■■□□□ 1.43
SNAPC3-207ENST00000610884 LMOD2Q6P5Q4 547 aa23.98■■□□□ 1.43
SNAPC3-207ENST00000610884 WWC1Q8IX03 1113 aa23.98■■□□□ 1.43
SNAPC3-207ENST00000610884 RCAN3Q9UKA8 241 aa23.98■■□□□ 1.43
SNAPC3-207ENST00000610884 TOPAZ1Q8N9V7 1692 aa23.97■■□□□ 1.43
SNAPC3-207ENST00000610884 ANKRD26Q9UPS8 1709 aa23.97■■□□□ 1.43
SNAPC3-207ENST00000610884 DUSP27Q5VZP5 1158 aa23.96■■□□□ 1.43
SNAPC3-207ENST00000610884 ZBTB7CA1YPR0 619 aa23.96■■□□□ 1.43
SNAPC3-207ENST00000610884 PSME1Q06323 249 aa23.96■■□□□ 1.43
SNAPC3-207ENST00000610884 COL3A1P02461 1466 aaPredicted RBP23.96■■□□□ 1.43
SNAPC3-207ENST00000610884 PHACTR3Q96KR7 559 aa23.95■■□□□ 1.42
SNAPC3-207ENST00000610884 PLEKHF1Q96S99 279 aa23.94■■□□□ 1.42
SNAPC3-207ENST00000610884 PDE3BQ13370 1112 aa23.94■■□□□ 1.42
SNAPC3-207ENST00000610884 PRKAR2BP31323 418 aa23.93■■□□□ 1.42
SNAPC3-207ENST00000610884 SLFN5Q08AF3 891 aa23.92■■□□□ 1.42
SNAPC3-207ENST00000610884 AEBP1Q8IUX7 1158 aa23.92■■□□□ 1.42
SNAPC3-207ENST00000610884 TMEM94Q12767 1356 aa23.92■■□□□ 1.42
SNAPC3-207ENST00000610884 PNPLA6Q8IY17 1366 aa23.92■■□□□ 1.42
SNAPC3-207ENST00000610884 SSH2Q76I76 1423 aa23.92■■□□□ 1.42
SNAPC3-207ENST00000610884 IL13P35225 146 aa23.92■■□□□ 1.42
SNAPC3-207ENST00000610884 ADGRL3Q9HAR2 1447 aa23.92■■□□□ 1.42
SNAPC3-207ENST00000610884 INSRP06213 1382 aa23.9■■□□□ 1.42
SNAPC3-207ENST00000610884 ZNF335Q9H4Z2 1342 aaPredicted RBP23.9■■□□□ 1.42
SNAPC3-207ENST00000610884 B4GALNT3Q6L9W6 998 aa23.9■■□□□ 1.42
SNAPC3-207ENST00000610884 LMTK3Q96Q04 1460 aa23.9■■□□□ 1.42
SNAPC3-207ENST00000610884 MAP3K19Q56UN5 1328 aa23.9■■□□□ 1.42
SNAPC3-207ENST00000610884 FMN2Q9NZ56 1722 aa23.9■■□□□ 1.42
SNAPC3-207ENST00000610884 LTV1Q96GA3 475 aaPredicted RBP23.89■■□□□ 1.42
SNAPC3-207ENST00000610884 THUMPD2Q9BTF0 503 aaKnown RBP23.89■■□□□ 1.41
SNAPC3-207ENST00000610884 STRCP1A6NGW2 1772 aa23.89■■□□□ 1.41
SNAPC3-207ENST00000610884 EIF4A2Q14240 407 aaKnown RBP23.88■■□□□ 1.41
SNAPC3-207ENST00000610884 NRKQ7Z2Y5 1582 aa23.88■■□□□ 1.41
SNAPC3-207ENST00000610884 TMPOP42166 694 aaKnown RBP23.88■■□□□ 1.41
SNAPC3-207ENST00000610884 C19orf44Q9H6X5 657 aa23.88■■□□□ 1.41
SNAPC3-207ENST00000610884 OVOS2A0A0J9YW53 1432 aa23.88■■□□□ 1.41
SNAPC3-207ENST00000610884 OVOS2Q6IE36 1432 aa23.88■■□□□ 1.41
SNAPC3-207ENST00000610884 MAPK8IP3Q9UPT6 1336 aa23.87■■□□□ 1.41
SNAPC3-207ENST00000610884 RIPK4P57078 832 aa23.87■■□□□ 1.41
SNAPC3-207ENST00000610884 RSPH6AQ9H0K4 717 aa23.87■■□□□ 1.41
SNAPC3-207ENST00000610884 TSR2Q969E8 191 aaKnown RBP23.86■■□□□ 1.41
SNAPC3-207ENST00000610884 C20orf194Q5TEA3 1177 aa23.85■■□□□ 1.41
SNAPC3-207ENST00000610884 TRIM35Q9UPQ4 493 aa23.85■■□□□ 1.41
SNAPC3-207ENST00000610884 ANKARQ7Z5J8 1434 aa23.85■■□□□ 1.41
SNAPC3-207ENST00000610884 AMPHP49418 695 aa23.85■■□□□ 1.41
SNAPC3-207ENST00000610884 RRP1P56182 461 aaKnown RBP23.85■■□□□ 1.41
SNAPC3-207ENST00000610884 SULT6B1Q6IMI4 303 aa23.85■■□□□ 1.41
SNAPC3-207ENST00000610884 BCAR3O75815 825 aa23.84■■□□□ 1.41
SNAPC3-207ENST00000610884 ATF3P18847 181 aa23.84■■□□□ 1.41
SNAPC3-207ENST00000610884 AATKQ6ZMQ8 1374 aa23.84■■□□□ 1.41
SNAPC3-207ENST00000610884 TTC21AQ8NDW8 1320 aa23.83■■□□□ 1.41
SNAPC3-207ENST00000610884 PIK3C2AO00443 1686 aa23.82■■□□□ 1.4
SNAPC3-207ENST00000610884 FAM83GA6ND36 823 aa23.82■■□□□ 1.4
SNAPC3-207ENST00000610884 BCL2L13Q9BXK5 485 aa23.82■■□□□ 1.4
SNAPC3-207ENST00000610884 LAS1LQ9Y4W2 734 aaKnown RBP23.82■■□□□ 1.4
SNAPC3-207ENST00000610884 IQSEC2Q5JU85 1478 aa23.81■■□□□ 1.4
SNAPC3-207ENST00000610884 DCTN1Q14203 1278 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms