RNA–Protein interactions for RNA: ENST00000610189.1

GPN1-211, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPN1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-211ENST00000610189 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
GPN1-211ENST00000610189 GTF3C3Q9Y5Q9 886 aa18.25■□□□□ 0.51
GPN1-211ENST00000610189 COL3A1P02461 1466 aaPredicted RBP18.25■□□□□ 0.51
GPN1-211ENST00000610189 TTC21BQ7Z4L5 1316 aa18.25■□□□□ 0.51
GPN1-211ENST00000610189 SENP3-EIF4A1A0A087X0R7 540 aa18.25■□□□□ 0.51
GPN1-211ENST00000610189 PROSER2Q86WR7 435 aaPredicted RBP18.25■□□□□ 0.51
GPN1-211ENST00000610189 CFAP53Q96M91 514 aa18.25■□□□□ 0.51
GPN1-211ENST00000610189 PIK3C2AO00443 1686 aa18.24■□□□□ 0.51
GPN1-211ENST00000610189 C14orf37Q86TY3 774 aa18.24■□□□□ 0.51
GPN1-211ENST00000610189 XIRP1Q702N8 1843 aaKnown RBP18.23■□□□□ 0.51
GPN1-211ENST00000610189 ZRANB1Q9UGI0 708 aa18.23■□□□□ 0.51
GPN1-211ENST00000610189 OVOS2A0A0J9YW53 1432 aa18.23■□□□□ 0.51
GPN1-211ENST00000610189 OVOS2Q6IE36 1432 aa18.23■□□□□ 0.51
GPN1-211ENST00000610189 USP54Q70EL1 1684 aa18.22■□□□□ 0.51
GPN1-211ENST00000610189 NGDNQ8NEJ9 315 aaKnown RBP18.22■□□□□ 0.51
GPN1-211ENST00000610189 COG3Q96JB2 828 aa18.22■□□□□ 0.51
GPN1-211ENST00000610189 MARF1Q9Y4F3 1742 aaKnown RBP18.21■□□□□ 0.51
GPN1-211ENST00000610189 SMG6Q86US8 1419 aaKnown RBP18.2■□□□□ 0.5
GPN1-211ENST00000610189 TTC21AQ8NDW8 1320 aa18.2■□□□□ 0.5
GPN1-211ENST00000610189 KIF1AQ12756 1690 aa18.2■□□□□ 0.5
GPN1-211ENST00000610189 AATKQ6ZMQ8 1374 aa18.19■□□□□ 0.5
GPN1-211ENST00000610189 PHF8Q9UPP1 1060 aa18.19■□□□□ 0.5
GPN1-211ENST00000610189 TMEM94Q12767 1356 aa18.18■□□□□ 0.5
GPN1-211ENST00000610189 NCOA3Q9Y6Q9 1424 aa18.18■□□□□ 0.5
GPN1-211ENST00000610189 CDK12Q9NYV4 1490 aaPredicted RBP18.18■□□□□ 0.5
GPN1-211ENST00000610189 PNPLA6Q8IY17 1366 aa18.17■□□□□ 0.5
GPN1-211ENST00000610189 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
GPN1-211ENST00000610189 POLKQ9UBT6 870 aa18.17■□□□□ 0.5
GPN1-211ENST00000610189 DCCP43146 1447 aa18.16■□□□□ 0.5
GPN1-211ENST00000610189 SALL2Q9Y467 1007 aaPredicted RBP18.16■□□□□ 0.5
GPN1-211ENST00000610189 LRRC7Q96NW7 1537 aa18.15■□□□□ 0.5
GPN1-211ENST00000610189 FBLN1P23142 703 aa18.15■□□□□ 0.5
GPN1-211ENST00000610189 C19orf44Q9H6X5 657 aa18.14■□□□□ 0.5
GPN1-211ENST00000610189 USP31Q70CQ4 1352 aa18.14■□□□□ 0.5
GPN1-211ENST00000610189 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.49
GPN1-211ENST00000610189 C1orf167Q5SNV9 1468 aa18.14■□□□□ 0.49
GPN1-211ENST00000610189 PEAK1Q9H792 1746 aa18.14■□□□□ 0.49
GPN1-211ENST00000610189 ESCO1Q5FWF5 840 aa18.14■□□□□ 0.49
GPN1-211ENST00000610189 TRPM3Q9HCF6 1732 aaPredicted RBP18.13■□□□□ 0.49
GPN1-211ENST00000610189 EMILIN1Q9Y6C2 1016 aa18.13■□□□□ 0.49
GPN1-211ENST00000610189 MST1RQ04912 1400 aa18.12■□□□□ 0.49
GPN1-211ENST00000610189 NUDCQ9Y266 331 aa18.12■□□□□ 0.49
GPN1-211ENST00000610189 PPM1GO15355 546 aaPredicted RBP18.12■□□□□ 0.49
GPN1-211ENST00000610189 DIAPH1O60610 1272 aaKnown RBP18.11■□□□□ 0.49
GPN1-211ENST00000610189 U2AF1L5P0DN76 240 aaPredicted RBP18.11■□□□□ 0.49
GPN1-211ENST00000610189 U2AF1Q01081 240 aaKnown RBP eCLIP18.11■□□□□ 0.49
GPN1-211ENST00000610189 PDE3BQ13370 1112 aa18.1■□□□□ 0.49
GPN1-211ENST00000610189 RRS1Q15050 365 aaKnown RBP18.1■□□□□ 0.49
GPN1-211ENST00000610189 ZNF335Q9H4Z2 1342 aaPredicted RBP18.1■□□□□ 0.49
GPN1-211ENST00000610189 APAF1O14727 1248 aa18.09■□□□□ 0.49
GPN1-211ENST00000610189 ATF3P18847 181 aa18.09■□□□□ 0.49
GPN1-211ENST00000610189 ORAI2Q96SN7 254 aa18.09■□□□□ 0.49
GPN1-211ENST00000610189 MSH6P52701 1360 aa18.09■□□□□ 0.49
GPN1-211ENST00000610189 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
GPN1-211ENST00000610189 RUNDC1Q96C34 613 aa18.09■□□□□ 0.49
GPN1-211ENST00000610189 LTN1O94822 1766 aa18.08■□□□□ 0.48
GPN1-211ENST00000610189 PAK3O75914 559 aaPredicted RBP18.07■□□□□ 0.48
GPN1-211ENST00000610189 ZNF521Q96K83 1311 aa18.07■□□□□ 0.48
GPN1-211ENST00000610189 NLRP6P59044 892 aa18.06■□□□□ 0.48
GPN1-211ENST00000610189 PSME1Q06323 249 aa18.06■□□□□ 0.48
GPN1-211ENST00000610189 ALS2Q96Q42 1657 aa18.05■□□□□ 0.48
GPN1-211ENST00000610189 NGEFQ8N5V2 710 aa18.05■□□□□ 0.48
GPN1-211ENST00000610189 ABTB2Q8N961 1025 aa18.05■□□□□ 0.48
GPN1-211ENST00000610189 SUPT16HQ9Y5B9 1047 aaKnown RBP18.05■□□□□ 0.48
GPN1-211ENST00000610189 RGPD1P0DJD0 1748 aa18.05■□□□□ 0.48
GPN1-211ENST00000610189 SOX12O15370 315 aa18.04■□□□□ 0.48
GPN1-211ENST00000610189 NUTM2GQ5VZR2 741 aa18.04■□□□□ 0.48
GPN1-211ENST00000610189 CADPS2Q86UW7 1296 aa18.04■□□□□ 0.48
GPN1-211ENST00000610189 CDCA7LQ96GN5 454 aa18.04■□□□□ 0.48
GPN1-211ENST00000610189 FOXO3O43524 673 aa18.04■□□□□ 0.48
GPN1-211ENST00000610189 IL13P35225 146 aa18.04■□□□□ 0.48
GPN1-211ENST00000610189 TCP11L2Q8N4U5 519 aa18.03■□□□□ 0.48
GPN1-211ENST00000610189 NFAT5O94916 1531 aa18.03■□□□□ 0.48
GPN1-211ENST00000610189 NEFLP07196 543 aa18.02■□□□□ 0.48
GPN1-211ENST00000610189 MAP3K19Q56UN5 1328 aa18.02■□□□□ 0.48
GPN1-211ENST00000610189 SBNO1A3KN83 1393 aa18.02■□□□□ 0.47
GPN1-211ENST00000610189 XPCQ01831 940 aaPredicted RBP18.02■□□□□ 0.47
GPN1-211ENST00000610189 PLEKHF1Q96S99 279 aa18.02■□□□□ 0.47
GPN1-211ENST00000610189 DMRT2Q9Y5R5 561 aa18.02■□□□□ 0.47
GPN1-211ENST00000610189 FLT4P35916 1363 aa18.01■□□□□ 0.47
GPN1-211ENST00000610189 SLIT3O75094 1523 aa18■□□□□ 0.47
GPN1-211ENST00000610189 PHRF1Q9P1Y6 1649 aaKnown RBP18■□□□□ 0.47
GPN1-211ENST00000610189 GOLGA2Q08379 1002 aa18■□□□□ 0.47
GPN1-211ENST00000610189 RRP7AQ9Y3A4 280 aaKnown RBP18■□□□□ 0.47
GPN1-211ENST00000610189 MAPK8IP3Q9UPT6 1336 aa18■□□□□ 0.47
GPN1-211ENST00000610189 RSPH6AQ9H0K4 717 aa17.99■□□□□ 0.47
GPN1-211ENST00000610189 DLG5Q8TDM6 1919 aa17.99■□□□□ 0.47
GPN1-211ENST00000610189 FCHSD2O94868 740 aa17.99■□□□□ 0.47
GPN1-211ENST00000610189 EIF4A2Q14240 407 aaKnown RBP17.99■□□□□ 0.47
GPN1-211ENST00000610189 KRT28Q7Z3Y7 464 aa17.99■□□□□ 0.47
GPN1-211ENST00000610189 PNNQ9H307 717 aaKnown RBP17.99■□□□□ 0.47
GPN1-211ENST00000610189 FKBP8Q14318 412 aa17.98■□□□□ 0.47
GPN1-211ENST00000610189 NEUROD2Q15784 382 aa17.98■□□□□ 0.47
GPN1-211ENST00000610189 KIF24Q5T7B8 1368 aa17.98■□□□□ 0.47
GPN1-211ENST00000610189 WWC1Q8IX03 1113 aa17.97■□□□□ 0.47
GPN1-211ENST00000610189 PRKAR2BP31323 418 aa17.96■□□□□ 0.47
GPN1-211ENST00000610189 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.47
GPN1-211ENST00000610189 HSP90AB2PQ58FF8 381 aa17.96■□□□□ 0.47
GPN1-211ENST00000610189 PHF23Q9BUL5 403 aaPredicted RBP17.96■□□□□ 0.47
GPN1-211ENST00000610189 PXDNQ92626 1479 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms