RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 ERICH6Q7L0X2 663 aa10.42□□□□□ -0.74
LMBR1-221ENST00000609774 SIN3AQ96ST3 1273 aa10.42□□□□□ -0.74
LMBR1-221ENST00000609774 RBM19Q9Y4C8 960 aaKnown RBP10.42□□□□□ -0.74
LMBR1-221ENST00000609774 HFM1A2PYH4 1435 aa10.41□□□□□ -0.74
LMBR1-221ENST00000609774 ROCK1Q13464 1354 aa10.41□□□□□ -0.74
LMBR1-221ENST00000609774 POTEJP0CG39 1038 aa10.41□□□□□ -0.74
LMBR1-221ENST00000609774 GJD4Q96KN9 370 aaPredicted RBP10.41□□□□□ -0.74
LMBR1-221ENST00000609774 TRPC6Q9Y210 931 aa10.41□□□□□ -0.74
LMBR1-221ENST00000609774 CCDC61Q9Y6R9 512 aa10.41□□□□□ -0.74
LMBR1-221ENST00000609774 FANCIQ9NVI1 1328 aa10.4□□□□□ -0.74
LMBR1-221ENST00000609774 ATMINO43313 823 aaPredicted RBP10.4□□□□□ -0.74
LMBR1-221ENST00000609774 ADAMTS2O95450 1211 aa10.4□□□□□ -0.74
LMBR1-221ENST00000609774 DDX17Q92841 729 aaKnown RBP10.4□□□□□ -0.74
LMBR1-221ENST00000609774 SLIT2O94813 1529 aa10.39□□□□□ -0.75
LMBR1-221ENST00000609774 NEXMIFQ5QGS0 1516 aa10.39□□□□□ -0.75
LMBR1-221ENST00000609774 ONECUT3O60422 494 aaPredicted RBP10.39□□□□□ -0.75
LMBR1-221ENST00000609774 ASTLQ6HA08 431 aaPredicted RBP10.39□□□□□ -0.75
LMBR1-221ENST00000609774 GLI3P10071 1580 aa10.39□□□□□ -0.75
LMBR1-221ENST00000609774 PXDNQ92626 1479 aa10.38□□□□□ -0.75
LMBR1-221ENST00000609774 CHGAP10645 457 aaKnown RBP10.38□□□□□ -0.75
LMBR1-221ENST00000609774 RASEFQ8IZ41 740 aa10.38□□□□□ -0.75
LMBR1-221ENST00000609774 CDC42BPGQ6DT37 1551 aa10.37□□□□□ -0.75
LMBR1-221ENST00000609774 ORAI2Q96SN7 254 aa10.37□□□□□ -0.75
LMBR1-221ENST00000609774 METRNQ9UJH8 293 aa10.37□□□□□ -0.75
LMBR1-221ENST00000609774 BRWD3Q6RI45 1802 aa10.37□□□□□ -0.75
LMBR1-221ENST00000609774 NPHP3Q7Z494 1330 aa10.36□□□□□ -0.75
LMBR1-221ENST00000609774 KIF12Q96FN5 646 aa10.36□□□□□ -0.75
LMBR1-221ENST00000609774 RALGAPBQ86X10 1494 aa10.36□□□□□ -0.75
LMBR1-221ENST00000609774 UNC5CLQ8IV45 518 aa10.35□□□□□ -0.75
LMBR1-221ENST00000609774 ROBO2Q9HCK4 1378 aa10.35□□□□□ -0.75
LMBR1-221ENST00000609774 NWD2Q9ULI1 1742 aa10.34□□□□□ -0.75
LMBR1-221ENST00000609774 ATN1P54259 1190 aaPredicted RBP10.34□□□□□ -0.75
LMBR1-221ENST00000609774 NUP155O75694 1391 aa10.34□□□□□ -0.75
LMBR1-221ENST00000609774 HNRNPUQ00839 825 aaKnown RBP eCLIP10.33□□□□□ -0.76
LMBR1-221ENST00000609774 BCL11AQ9H165 835 aa10.33□□□□□ -0.76
LMBR1-221ENST00000609774 PPP4R2Q9NY27 417 aa10.33□□□□□ -0.76
LMBR1-221ENST00000609774 LRPPRCP42704 1394 aaKnown RBP10.33□□□□□ -0.76
LMBR1-221ENST00000609774 EIF4G2P78344 907 aaKnown RBP eCLIP10.32□□□□□ -0.76
LMBR1-221ENST00000609774 KIF1BO60333 1816 aa10.32□□□□□ -0.76
LMBR1-221ENST00000609774 NAIPQ13075 1403 aa10.32□□□□□ -0.76
LMBR1-221ENST00000609774 MAP3K13O43283 966 aa10.31□□□□□ -0.76
LMBR1-221ENST00000609774 DEFB132Q7Z7B7 95 aa10.31□□□□□ -0.76
LMBR1-221ENST00000609774 CLTCL1P53675 1640 aa10.31□□□□□ -0.76
LMBR1-221ENST00000609774 USP32Q8NFA0 1604 aa10.31□□□□□ -0.76
LMBR1-221ENST00000609774 DISP2A7MBM2 1401 aa10.31□□□□□ -0.76
LMBR1-221ENST00000609774 TECPR2O15040 1411 aa10.31□□□□□ -0.76
LMBR1-221ENST00000609774 RPGRIP1LQ68CZ1 1315 aa10.31□□□□□ -0.76
LMBR1-221ENST00000609774 POTEFA5A3E0 1075 aa10.3□□□□□ -0.76
LMBR1-221ENST00000609774 VGFO15240 615 aaPredicted RBP10.3□□□□□ -0.76
LMBR1-221ENST00000609774 VPS72Q15906 364 aa10.3□□□□□ -0.76
LMBR1-221ENST00000609774 BMP2KQ9NSY1 1161 aaPredicted RBP10.3□□□□□ -0.76
LMBR1-221ENST00000609774 KIF1AQ12756 1690 aa10.3□□□□□ -0.76
LMBR1-221ENST00000609774 SPATA31A3Q5VYP0 1347 aa10.3□□□□□ -0.76
LMBR1-221ENST00000609774 SF3B2Q13435 895 aaKnown RBP10.29□□□□□ -0.76
LMBR1-221ENST00000609774 ZNF326Q5BKZ1 582 aaKnown RBP10.28□□□□□ -0.76
LMBR1-221ENST00000609774 SEPT12Q8IYM1 358 aa10.28□□□□□ -0.76
LMBR1-221ENST00000609774 SLC39A7Q92504 469 aa10.28□□□□□ -0.76
LMBR1-221ENST00000609774 RGPD1P0DJD0 1748 aa10.27□□□□□ -0.76
LMBR1-221ENST00000609774 PPLO60437 1756 aa10.27□□□□□ -0.77
LMBR1-221ENST00000609774 CCDC144AA2RUR9 1427 aa10.27□□□□□ -0.77
LMBR1-221ENST00000609774 ESCO1Q5FWF5 840 aa10.27□□□□□ -0.77
LMBR1-221ENST00000609774 PLCH1Q4KWH8 1693 aa10.27□□□□□ -0.77
LMBR1-221ENST00000609774 FOXO3O43524 673 aa10.26□□□□□ -0.77
LMBR1-221ENST00000609774 C7P10643 843 aa10.26□□□□□ -0.77
LMBR1-221ENST00000609774 BAG6P46379 1132 aa10.26□□□□□ -0.77
LMBR1-221ENST00000609774 KRT27Q7Z3Y8 459 aa10.26□□□□□ -0.77
LMBR1-221ENST00000609774 HIRIP3Q9BW71 556 aaPredicted RBP10.26□□□□□ -0.77
LMBR1-221ENST00000609774 PLSCR2Q9NRY7 297 aa10.26□□□□□ -0.77
LMBR1-221ENST00000609774 KNDC1Q76NI1 1749 aa10.26□□□□□ -0.77
LMBR1-221ENST00000609774 FMN2Q9NZ56 1722 aa10.26□□□□□ -0.77
LMBR1-221ENST00000609774 ABCA3Q99758 1704 aa10.25□□□□□ -0.77
LMBR1-221ENST00000609774 HSPA5P11021 654 aaKnown RBP10.25□□□□□ -0.77
LMBR1-221ENST00000609774 ZBED9Q6R2W3 1325 aa10.25□□□□□ -0.77
LMBR1-221ENST00000609774 ABCC11Q96J66 1382 aa10.25□□□□□ -0.77
LMBR1-221ENST00000609774 SIRT1Q96EB6 747 aa10.24□□□□□ -0.77
LMBR1-221ENST00000609774 SBNO1A3KN83 1393 aa10.24□□□□□ -0.77
LMBR1-221ENST00000609774 NRAPQ86VF7 1730 aa10.24□□□□□ -0.77
LMBR1-221ENST00000609774 PLCD3Q8N3E9 789 aa10.23□□□□□ -0.77
LMBR1-221ENST00000609774 TNS1Q9HBL0 1735 aaKnown RBP10.23□□□□□ -0.77
LMBR1-221ENST00000609774 TNS3Q68CZ2 1445 aa10.23□□□□□ -0.77
LMBR1-221ENST00000609774 NUBP1P53384 320 aa10.22□□□□□ -0.77
LMBR1-221ENST00000609774 WASHC2AQ641Q2 1341 aa10.22□□□□□ -0.77
LMBR1-221ENST00000609774 PARD3Q8TEW0 1356 aa10.22□□□□□ -0.77
LMBR1-221ENST00000609774 CCDC7Q96M83 1385 aa10.22□□□□□ -0.77
LMBR1-221ENST00000609774 THSD7AQ9UPZ6 1657 aa10.22□□□□□ -0.77
LMBR1-221ENST00000609774 ARHGEF10O15013 1369 aa10.21□□□□□ -0.78
LMBR1-221ENST00000609774 PSDA5PKW4 1024 aaPredicted RBP10.2□□□□□ -0.78
LMBR1-221ENST00000609774 POTEMA6NI47 508 aa10.2□□□□□ -0.78
LMBR1-221ENST00000609774 LCE2DQ5TA82 110 aaPredicted RBP10.2□□□□□ -0.78
LMBR1-221ENST00000609774 KRT28Q7Z3Y7 464 aa10.2□□□□□ -0.78
LMBR1-221ENST00000609774 MRS2Q9HD23 443 aa10.2□□□□□ -0.78
LMBR1-221ENST00000609774 NRXN1Q9ULB1 1477 aa10.2□□□□□ -0.78
LMBR1-221ENST00000609774 COLQQ9Y215 455 aaPredicted RBP10.2□□□□□ -0.78
LMBR1-221ENST00000609774 COL14A1Q05707 1796 aaKnown RBP10.19□□□□□ -0.78
LMBR1-221ENST00000609774 IFT172Q9UG01 1749 aa10.19□□□□□ -0.78
LMBR1-221ENST00000609774 TTLL13PA6NNM8 815 aa10.19□□□□□ -0.78
LMBR1-221ENST00000609774 XPCQ01831 940 aaPredicted RBP10.19□□□□□ -0.78
LMBR1-221ENST00000609774 PSME1Q06323 249 aa10.19□□□□□ -0.78
LMBR1-221ENST00000609774 MPHOSPH9Q99550 1183 aa10.19□□□□□ -0.78
LMBR1-221ENST00000609774 PRKRIP1Q9H875 184 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms