RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 CHD4Q14839 1912 aa12.78□□□□□ -0.36
LINC01396-201ENST00000609099 TRIM37O94972 964 aa12.77□□□□□ -0.37
LINC01396-201ENST00000609099 ALS2Q96Q42 1657 aa12.77□□□□□ -0.37
LINC01396-201ENST00000609099 PPLO60437 1756 aa12.76□□□□□ -0.37
LINC01396-201ENST00000609099 PLEKHG5O94827 1062 aa12.76□□□□□ -0.37
LINC01396-201ENST00000609099 ANO8Q9HCE9 1232 aaPredicted RBP12.76□□□□□ -0.37
LINC01396-201ENST00000609099 SPATA31A5Q5VU36 1347 aa12.76□□□□□ -0.37
LINC01396-201ENST00000609099 SPATA31A7Q8IWB4 1347 aa12.76□□□□□ -0.37
LINC01396-201ENST00000609099 CCDC144AA2RUR9 1427 aa12.76□□□□□ -0.37
LINC01396-201ENST00000609099 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
LINC01396-201ENST00000609099 IFT172Q9UG01 1749 aa12.76□□□□□ -0.37
LINC01396-201ENST00000609099 COL14A1Q05707 1796 aaKnown RBP12.76□□□□□ -0.37
LINC01396-201ENST00000609099 TECPR2O15040 1411 aa12.75□□□□□ -0.37
LINC01396-201ENST00000609099 LRPPRCP42704 1394 aaKnown RBP12.75□□□□□ -0.37
LINC01396-201ENST00000609099 PARD3Q8TEW0 1356 aa12.75□□□□□ -0.37
LINC01396-201ENST00000609099 APBA3O96018 575 aa12.74□□□□□ -0.37
LINC01396-201ENST00000609099 WAPLQ7Z5K2 1190 aa12.74□□□□□ -0.37
LINC01396-201ENST00000609099 KNDC1Q76NI1 1749 aa12.74□□□□□ -0.37
LINC01396-201ENST00000609099 PTGER2P43116 358 aa12.73□□□□□ -0.37
LINC01396-201ENST00000609099 ZNF326Q5BKZ1 582 aaKnown RBP12.73□□□□□ -0.37
LINC01396-201ENST00000609099 KRT28Q7Z3Y7 464 aa12.73□□□□□ -0.37
LINC01396-201ENST00000609099 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
LINC01396-201ENST00000609099 NRXN1Q9ULB1 1477 aa12.72□□□□□ -0.37
LINC01396-201ENST00000609099 NUP155O75694 1391 aa12.72□□□□□ -0.37
LINC01396-201ENST00000609099 KIF1BO60333 1816 aa12.72□□□□□ -0.37
LINC01396-201ENST00000609099 PEAK1Q9H792 1746 aa12.72□□□□□ -0.37
LINC01396-201ENST00000609099 BTG4Q9NY30 223 aa12.72□□□□□ -0.37
LINC01396-201ENST00000609099 PCNTO95613 3336 aa12.7□□□□□ -0.38
LINC01396-201ENST00000609099 FAM196AQ6ZSG2 479 aa12.7□□□□□ -0.38
LINC01396-201ENST00000609099 SBNO1A3KN83 1393 aa12.69□□□□□ -0.38
LINC01396-201ENST00000609099 RGPD3A6NKT7 1758 aaPredicted RBP12.69□□□□□ -0.38
LINC01396-201ENST00000609099 RGPD4Q7Z3J3 1758 aa12.69□□□□□ -0.38
LINC01396-201ENST00000609099 RRBP1Q9P2E9 1410 aaKnown RBP12.69□□□□□ -0.38
LINC01396-201ENST00000609099 SBF2Q86WG5 1849 aa12.68□□□□□ -0.38
LINC01396-201ENST00000609099 PTF1AQ7RTS3 328 aa12.68□□□□□ -0.38
LINC01396-201ENST00000609099 SPATA31A1Q5TZJ5 1347 aa12.67□□□□□ -0.38
LINC01396-201ENST00000609099 SGIP1Q9BQI5 828 aa12.67□□□□□ -0.38
LINC01396-201ENST00000609099 ROCK1Q13464 1354 aa12.65□□□□□ -0.38
LINC01396-201ENST00000609099 PHRF1Q9P1Y6 1649 aaKnown RBP12.65□□□□□ -0.38
LINC01396-201ENST00000609099 ADGRF5Q8IZF2 1346 aa12.64□□□□□ -0.39
LINC01396-201ENST00000609099 MYCNP04198 464 aaPredicted RBP12.64□□□□□ -0.39
LINC01396-201ENST00000609099 POLA2Q14181 598 aa12.64□□□□□ -0.39
LINC01396-201ENST00000609099 PROM2Q8N271 834 aa12.64□□□□□ -0.39
LINC01396-201ENST00000609099 ZBTB7AO95365 584 aa12.63□□□□□ -0.39
LINC01396-201ENST00000609099 PSME1Q06323 249 aa12.63□□□□□ -0.39
LINC01396-201ENST00000609099 SYT17Q9BSW7 474 aa12.63□□□□□ -0.39
LINC01396-201ENST00000609099 FHDC1Q9C0D6 1143 aaPredicted RBP12.63□□□□□ -0.39
LINC01396-201ENST00000609099 PHF8Q9UPP1 1060 aa12.63□□□□□ -0.39
LINC01396-201ENST00000609099 ARHGEF10O15013 1369 aa12.63□□□□□ -0.39
LINC01396-201ENST00000609099 ABCC11Q96J66 1382 aa12.62□□□□□ -0.39
LINC01396-201ENST00000609099 FAM50AQ14320 339 aaKnown RBP12.62□□□□□ -0.39
LINC01396-201ENST00000609099 PARP4Q9UKK3 1724 aaKnown RBP12.62□□□□□ -0.39
LINC01396-201ENST00000609099 LMO7Q8WWI1 1683 aa12.61□□□□□ -0.39
LINC01396-201ENST00000609099 STK26Q9P289 416 aa12.61□□□□□ -0.39
LINC01396-201ENST00000609099 GPR162Q16538 588 aa12.6□□□□□ -0.39
LINC01396-201ENST00000609099 TMEM132EQ6IEE7 984 aa12.6□□□□□ -0.39
LINC01396-201ENST00000609099 LMOD2Q6P5Q4 547 aa12.6□□□□□ -0.39
LINC01396-201ENST00000609099 LRRC37A3O60309 1634 aa12.59□□□□□ -0.39
LINC01396-201ENST00000609099 DLC1Q96QB1 1528 aa12.59□□□□□ -0.39
LINC01396-201ENST00000609099 LOC105371045A0A1W2PR82 267 aa12.59□□□□□ -0.39
LINC01396-201ENST00000609099 HSPA6P17066 643 aa12.59□□□□□ -0.39
LINC01396-201ENST00000609099 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
LINC01396-201ENST00000609099 PAPPAQ13219 1627 aa12.59□□□□□ -0.39
LINC01396-201ENST00000609099 KIAA0232Q92628 1395 aa12.58□□□□□ -0.4
LINC01396-201ENST00000609099 PDE3BQ13370 1112 aa12.58□□□□□ -0.4
LINC01396-201ENST00000609099 CHRNA2Q15822 529 aa12.58□□□□□ -0.4
LINC01396-201ENST00000609099 PRR36Q9H6K5 1346 aa12.58□□□□□ -0.4
LINC01396-201ENST00000609099 SSH2Q76I76 1423 aa12.57□□□□□ -0.4
LINC01396-201ENST00000609099 YTHDC2Q9H6S0 1430 aaKnown RBP12.57□□□□□ -0.4
LINC01396-201ENST00000609099 VGFO15240 615 aaPredicted RBP12.57□□□□□ -0.4
LINC01396-201ENST00000609099 CHRDL2Q6WN34 429 aa12.57□□□□□ -0.4
LINC01396-201ENST00000609099 PMFBP1Q8TBY8 1022 aa12.57□□□□□ -0.4
LINC01396-201ENST00000609099 PIK3C2GO75747 1445 aa12.56□□□□□ -0.4
LINC01396-201ENST00000609099 COL24A1Q17RW2 1714 aa12.56□□□□□ -0.4
LINC01396-201ENST00000609099 SLC34A2O95436 690 aa12.55□□□□□ -0.4
LINC01396-201ENST00000609099 SPATA31E1Q6ZUB1 1445 aa12.54□□□□□ -0.4
LINC01396-201ENST00000609099 C11orf95C9JLR9 678 aaPredicted RBP12.54□□□□□ -0.4
LINC01396-201ENST00000609099 PCDH10Q9P2E7 1040 aa12.54□□□□□ -0.4
LINC01396-201ENST00000609099 MAP3K5Q99683 1374 aa12.54□□□□□ -0.4
LINC01396-201ENST00000609099 ATP7BP35670 1465 aa12.53□□□□□ -0.4
LINC01396-201ENST00000609099 WNK3Q9BYP7 1800 aa12.53□□□□□ -0.4
LINC01396-201ENST00000609099 PRELPP51888 382 aa12.53□□□□□ -0.4
LINC01396-201ENST00000609099 LARP1Q6PKG0 1096 aaKnown RBP12.53□□□□□ -0.4
LINC01396-201ENST00000609099 BARGINQ6ZT62 677 aa12.53□□□□□ -0.4
LINC01396-201ENST00000609099 USP35Q9P2H5 1018 aa12.53□□□□□ -0.4
LINC01396-201ENST00000609099 ACIN1Q9UKV3 1341 aaKnown RBP12.53□□□□□ -0.4
LINC01396-201ENST00000609099 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.41
LINC01396-201ENST00000609099 PRDM11Q9NQV5 511 aa12.52□□□□□ -0.41
LINC01396-201ENST00000609099 STRN4Q9NRL3 753 aa12.52□□□□□ -0.41
LINC01396-201ENST00000609099 RPGRIP1LQ68CZ1 1315 aa12.52□□□□□ -0.41
LINC01396-201ENST00000609099 ANKARQ7Z5J8 1434 aa12.52□□□□□ -0.41
LINC01396-201ENST00000609099 PLSCR1O15162 318 aa12.5□□□□□ -0.41
LINC01396-201ENST00000609099 PELP1Q8IZL8 1130 aaKnown RBP12.5□□□□□ -0.41
LINC01396-201ENST00000609099 ARXQ96QS3 562 aa12.5□□□□□ -0.41
LINC01396-201ENST00000609099 MTFR1LQ9H019 292 aa12.49□□□□□ -0.41
LINC01396-201ENST00000609099 GPBP1L1Q9HC44 474 aaPredicted RBP12.49□□□□□ -0.41
LINC01396-201ENST00000609099 TUBGCP6Q96RT7 1819 aa12.48□□□□□ -0.41
LINC01396-201ENST00000609099 OVOS2A0A0G2JMS6 1433 aa12.48□□□□□ -0.41
LINC01396-201ENST00000609099 OVOS2A0A0J9YW53 1432 aa12.48□□□□□ -0.41
LINC01396-201ENST00000609099 OVOS2Q6IE36 1432 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms