RNA–Protein interactions for RNA: ENST00000608895.5

PKIB-210, Transcript of cAMP-dependent protein kinase inhibitor beta, human

TSL 3

Gene PKIB, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKIB-210	ENST00000608895	NRXN3	Q9Y4C0	1643 aa		13.91	□□□□□ -0.18
PKIB-210	ENST00000608895	NALCN	Q8IZF0	1738 aa		13.91	□□□□□ -0.18
PKIB-210	ENST00000608895	MYOM2	P54296	1465 aa		13.91	□□□□□ -0.18
PKIB-210	ENST00000608895	POTEB2	H3BUK9	544 aa		13.9	□□□□□ -0.18
PKIB-210	ENST00000608895	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.9	□□□□□ -0.19
PKIB-210	ENST00000608895	RALGAPB	Q86X10	1494 aa		13.89	□□□□□ -0.19
PKIB-210	ENST00000608895	YY1	P25490	414 aa		13.89	□□□□□ -0.19
PKIB-210	ENST00000608895	GLI3	P10071	1580 aa		13.88	□□□□□ -0.19
PKIB-210	ENST00000608895	VPS8	Q8N3P4	1428 aa		13.88	□□□□□ -0.19
PKIB-210	ENST00000608895	ANKRD50	Q9ULJ7	1429 aa		13.87	□□□□□ -0.19
PKIB-210	ENST00000608895	UNC5CL	Q8IV45	518 aa		13.86	□□□□□ -0.19
PKIB-210	ENST00000608895	SEPT12	Q8IYM1	358 aa		13.86	□□□□□ -0.19
PKIB-210	ENST00000608895	BRWD3	Q6RI45	1802 aa		13.85	□□□□□ -0.19
PKIB-210	ENST00000608895	IER5L	Q5T953	404 aa		13.85	□□□□□ -0.19
PKIB-210	ENST00000608895	ADGRL2	O95490	1459 aa		13.85	□□□□□ -0.19
PKIB-210	ENST00000608895		E9PCH4	1651 aa		13.85	□□□□□ -0.19
PKIB-210	ENST00000608895	MARF1	Q9Y4F3	1742 aa	Known RBP	13.84	□□□□□ -0.19
PKIB-210	ENST00000608895	BAG6	P46379	1132 aa		13.84	□□□□□ -0.19
PKIB-210	ENST00000608895	SPHKAP	Q2M3C7	1700 aa		13.84	□□□□□ -0.19
PKIB-210	ENST00000608895	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.84	□□□□□ -0.19
PKIB-210	ENST00000608895	XPC	Q01831	940 aa	Predicted RBP	13.83	□□□□□ -0.2
PKIB-210	ENST00000608895	R3HDM1	Q15032	1099 aa	Known RBP	13.83	□□□□□ -0.2
PKIB-210	ENST00000608895	SLIT2	O94813	1529 aa		13.83	□□□□□ -0.2
PKIB-210	ENST00000608895	PSEN1	P49768	467 aa		13.82	□□□□□ -0.2
PKIB-210	ENST00000608895	GOLGA2	Q08379	1002 aa		13.82	□□□□□ -0.2
PKIB-210	ENST00000608895	ZNF326	Q5BKZ1	582 aa	Known RBP	13.82	□□□□□ -0.2
PKIB-210	ENST00000608895	NPHP3	Q7Z494	1330 aa		13.82	□□□□□ -0.2
PKIB-210	ENST00000608895	KRT27	Q7Z3Y8	459 aa		13.81	□□□□□ -0.2
PKIB-210	ENST00000608895	COLQ	Q9Y215	455 aa	Predicted RBP	13.81	□□□□□ -0.2
PKIB-210	ENST00000608895	PXDN	Q92626	1479 aa		13.8	□□□□□ -0.2
PKIB-210	ENST00000608895	EN1	Q05925	392 aa	Predicted RBP	13.8	□□□□□ -0.2
PKIB-210	ENST00000608895	ESCO1	Q5FWF5	840 aa		13.8	□□□□□ -0.2
PKIB-210	ENST00000608895	MAMSTR	Q6ZN01	415 aa		13.8	□□□□□ -0.2
PKIB-210	ENST00000608895	OTUD5	Q96G74	571 aa		13.8	□□□□□ -0.2
PKIB-210	ENST00000608895	ROBO2	Q9HCK4	1378 aa		13.8	□□□□□ -0.2
PKIB-210	ENST00000608895	IQGAP3	Q86VI3	1631 aa		13.79	□□□□□ -0.2
PKIB-210	ENST00000608895	POTEF	A5A3E0	1075 aa		13.79	□□□□□ -0.2
PKIB-210	ENST00000608895	FOXO3	O43524	673 aa		13.79	□□□□□ -0.2
PKIB-210	ENST00000608895	PDAP1	Q13442	181 aa	Known RBP	13.79	□□□□□ -0.2
PKIB-210	ENST00000608895	PLCG2	P16885	1265 aa		13.78	□□□□□ -0.2
PKIB-210	ENST00000608895	CCDC9	Q9Y3X0	531 aa	Known RBP	13.78	□□□□□ -0.2
PKIB-210	ENST00000608895	ONECUT3	O60422	494 aa	Predicted RBP	13.77	□□□□□ -0.21
PKIB-210	ENST00000608895	VPS72	Q15906	364 aa		13.77	□□□□□ -0.21
PKIB-210	ENST00000608895		A0A0G2JS52	829 aa		13.76	□□□□□ -0.21
PKIB-210	ENST00000608895	MYT1	Q01538	1121 aa		13.76	□□□□□ -0.21
PKIB-210	ENST00000608895	SCUBE2	Q9NQ36	999 aa		13.75	□□□□□ -0.21
PKIB-210	ENST00000608895	POTEJ	P0CG39	1038 aa		13.74	□□□□□ -0.21
PKIB-210	ENST00000608895	MKRN3	Q13064	507 aa	Known RBP	13.74	□□□□□ -0.21
PKIB-210	ENST00000608895	FAM50A	Q14320	339 aa	Known RBP	13.74	□□□□□ -0.21
PKIB-210	ENST00000608895	USP32	Q8NFA0	1604 aa		13.73	□□□□□ -0.21
PKIB-210	ENST00000608895	NEXMIF	Q5QGS0	1516 aa		13.73	□□□□□ -0.21
PKIB-210	ENST00000608895	LRPPRC	P42704	1394 aa	Known RBP	13.72	□□□□□ -0.21
PKIB-210	ENST00000608895	NUTM2F	A1L443	756 aa		13.72	□□□□□ -0.21
PKIB-210	ENST00000608895	FAM182B	Q5T319	152 aa		13.72	□□□□□ -0.21
PKIB-210	ENST00000608895	IFFO2	Q5TF58	517 aa		13.72	□□□□□ -0.21
PKIB-210	ENST00000608895	NUP155	O75694	1391 aa		13.71	□□□□□ -0.21
PKIB-210	ENST00000608895	SPATA31A3	Q5VYP0	1347 aa		13.71	□□□□□ -0.21
PKIB-210	ENST00000608895	HAP1	P54257	671 aa	Predicted RBP	13.71	□□□□□ -0.21
PKIB-210	ENST00000608895	EZH2	Q15910	746 aa	Known RBP	13.71	□□□□□ -0.21
PKIB-210	ENST00000608895	OCEL1	Q9H607	264 aa		13.71	□□□□□ -0.21
PKIB-210	ENST00000608895	HFM1	A2PYH4	1435 aa		13.71	□□□□□ -0.22
PKIB-210	ENST00000608895	IRX5	P78411	483 aa	Predicted RBP	13.7	□□□□□ -0.22
PKIB-210	ENST00000608895	FAM98C	Q17RN3	349 aa	Known RBP	13.7	□□□□□ -0.22
PKIB-210	ENST00000608895	CABLES1	Q8TDN4	633 aa		13.7	□□□□□ -0.22
PKIB-210	ENST00000608895	CDC42BPG	Q6DT37	1551 aa		13.7	□□□□□ -0.22
PKIB-210	ENST00000608895	PRAG1	Q86YV5	1406 aa		13.69	□□□□□ -0.22
PKIB-210	ENST00000608895	RGPD1	P0DJD0	1748 aa		13.69	□□□□□ -0.22
PKIB-210	ENST00000608895	PLCH1	Q4KWH8	1693 aa		13.69	□□□□□ -0.22
PKIB-210	ENST00000608895	DISP2	A7MBM2	1401 aa		13.68	□□□□□ -0.22
PKIB-210	ENST00000608895	SENP3-EIF4A1	A0A087X0R7	540 aa		13.67	□□□□□ -0.22
PKIB-210	ENST00000608895	RIOK3	O14730	519 aa	Known RBP	13.67	□□□□□ -0.22
PKIB-210	ENST00000608895	CABP2	Q9NPB3	220 aa		13.67	□□□□□ -0.22
PKIB-210	ENST00000608895	NWD2	Q9ULI1	1742 aa		13.67	□□□□□ -0.22
PKIB-210	ENST00000608895	KRT28	Q7Z3Y7	464 aa		13.66	□□□□□ -0.22
PKIB-210	ENST00000608895	CCDC144A	A2RUR9	1427 aa		13.65	□□□□□ -0.22
PKIB-210	ENST00000608895	NAIP	Q13075	1403 aa		13.65	□□□□□ -0.22
PKIB-210	ENST00000608895	CAMKK2	Q96RR4	588 aa		13.65	□□□□□ -0.22
PKIB-210	ENST00000608895	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.65	□□□□□ -0.22
PKIB-210	ENST00000608895	TNS1	Q9HBL0	1735 aa	Known RBP	13.64	□□□□□ -0.23
PKIB-210	ENST00000608895	UTRN	P46939	3433 aa		13.64	□□□□□ -0.23
PKIB-210	ENST00000608895	FAM83G	A6ND36	823 aa		13.64	□□□□□ -0.23
PKIB-210	ENST00000608895	CLTCL1	P53675	1640 aa		13.64	□□□□□ -0.23
PKIB-210	ENST00000608895	TNS3	Q68CZ2	1445 aa		13.64	□□□□□ -0.23
PKIB-210	ENST00000608895	VGF	O15240	615 aa	Predicted RBP	13.63	□□□□□ -0.23
PKIB-210	ENST00000608895	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.63	□□□□□ -0.23
PKIB-210	ENST00000608895	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PKIB-210	ENST00000608895	LOC105371045	A0A1W2PR82	267 aa		13.62	□□□□□ -0.23
PKIB-210	ENST00000608895	ECM2	O94769	699 aa	Predicted RBP	13.62	□□□□□ -0.23
PKIB-210	ENST00000608895	TRIM37	O94972	964 aa		13.62	□□□□□ -0.23
PKIB-210	ENST00000608895	LMOD2	Q6P5Q4	547 aa		13.62	□□□□□ -0.23
PKIB-210	ENST00000608895	WAPL	Q7Z5K2	1190 aa		13.62	□□□□□ -0.23
PKIB-210	ENST00000608895	BTG4	Q9NY30	223 aa		13.61	□□□□□ -0.23
PKIB-210	ENST00000608895	ADGRB2	O60241	1585 aa		13.61	□□□□□ -0.23
PKIB-210	ENST00000608895	ROCK1	Q13464	1354 aa		13.6	□□□□□ -0.23
PKIB-210	ENST00000608895	NINL	Q9Y2I6	1382 aa		13.6	□□□□□ -0.23
PKIB-210	ENST00000608895	APBA3	O96018	575 aa		13.6	□□□□□ -0.23
PKIB-210	ENST00000608895	NRAP	Q86VF7	1730 aa		13.6	□□□□□ -0.23
PKIB-210	ENST00000608895	SPON1	Q9HCB6	807 aa		13.6	□□□□□ -0.23
PKIB-210	ENST00000608895	KIF1A	Q12756	1690 aa		13.59	□□□□□ -0.23
PKIB-210	ENST00000608895	CAMTA1	Q9Y6Y1	1673 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms