RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 POLR3GLQ9BT43 218 aa19.8■□□□□ 0.76
CTSA-219ENST00000607841 SHPRHQ149N8 1683 aa19.8■□□□□ 0.76
CTSA-219ENST00000607841 KTN1Q86UP2 1357 aaKnown RBP19.8■□□□□ 0.76
CTSA-219ENST00000607841 ABTB2Q8N961 1025 aa19.79■□□□□ 0.76
CTSA-219ENST00000607841 MEX3CQ5U5Q3 659 aaKnown RBP19.78■□□□□ 0.76
CTSA-219ENST00000607841 HAP1P54257 671 aaPredicted RBP19.77■□□□□ 0.76
CTSA-219ENST00000607841 TTC21AQ8NDW8 1320 aa19.76■□□□□ 0.75
CTSA-219ENST00000607841 TTC21BQ7Z4L5 1316 aa19.76■□□□□ 0.75
CTSA-219ENST00000607841 A0A1W2PP64 1363 aa19.75■□□□□ 0.75
CTSA-219ENST00000607841 ANKRD36BQ8N2N9 1353 aa19.75■□□□□ 0.75
CTSA-219ENST00000607841 NLRP13Q86W25 1043 aa19.75■□□□□ 0.75
CTSA-219ENST00000607841 SSH2Q76I76 1423 aa19.75■□□□□ 0.75
CTSA-219ENST00000607841 CD163L1Q9NR16 1453 aa19.74■□□□□ 0.75
CTSA-219ENST00000607841 TRPM3Q9HCF6 1732 aaPredicted RBP19.74■□□□□ 0.75
CTSA-219ENST00000607841 COL22A1Q8NFW1 1626 aaPredicted RBP19.74■□□□□ 0.75
CTSA-219ENST00000607841 MED1Q15648 1581 aaPredicted RBP19.74■□□□□ 0.75
CTSA-219ENST00000607841 C11orf95C9JLR9 678 aaPredicted RBP19.73■□□□□ 0.75
CTSA-219ENST00000607841 PLEKHG5O94827 1062 aa19.73■□□□□ 0.75
CTSA-219ENST00000607841 ADAMTS2O95450 1211 aa19.73■□□□□ 0.75
CTSA-219ENST00000607841 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
CTSA-219ENST00000607841 NLRP6P59044 892 aa19.72■□□□□ 0.75
CTSA-219ENST00000607841 NUTM2GQ5VZR2 741 aa19.72■□□□□ 0.75
CTSA-219ENST00000607841 EDC4Q6P2E9 1401 aaKnown RBP19.72■□□□□ 0.75
CTSA-219ENST00000607841 CABLES1Q8TDN4 633 aa19.72■□□□□ 0.75
CTSA-219ENST00000607841 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.71■□□□□ 0.75
CTSA-219ENST00000607841 LRP6O75581 1613 aa19.71■□□□□ 0.75
CTSA-219ENST00000607841 KIF7Q2M1P5 1343 aa19.71■□□□□ 0.75
CTSA-219ENST00000607841 ALS2Q96Q42 1657 aa19.7■□□□□ 0.74
CTSA-219ENST00000607841 AKAP12Q02952 1782 aa19.68■□□□□ 0.74
CTSA-219ENST00000607841 NGLY1Q96IV0 654 aa19.68■□□□□ 0.74
CTSA-219ENST00000607841 C8orf37Q96NL8 207 aa19.68■□□□□ 0.74
CTSA-219ENST00000607841 USP19O94966 1318 aa19.66■□□□□ 0.74
CTSA-219ENST00000607841 MON2Q7Z3U7 1717 aa19.65■□□□□ 0.74
CTSA-219ENST00000607841 GCP02774 474 aa19.65■□□□□ 0.74
CTSA-219ENST00000607841 NME9Q86XW9 330 aa19.65■□□□□ 0.74
CTSA-219ENST00000607841 KCNH5Q8NCM2 988 aa19.65■□□□□ 0.74
CTSA-219ENST00000607841 PANK3Q9H999 370 aa19.65■□□□□ 0.74
CTSA-219ENST00000607841 USP31Q70CQ4 1352 aa19.65■□□□□ 0.74
CTSA-219ENST00000607841 CCDC7Q96M83 1385 aa19.65■□□□□ 0.74
CTSA-219ENST00000607841 ZNF772Q68DY9 489 aaPredicted RBP19.64■□□□□ 0.73
CTSA-219ENST00000607841 CARD14Q9BXL6 1004 aa19.64■□□□□ 0.73
CTSA-219ENST00000607841 WASHC2AQ641Q2 1341 aa19.64■□□□□ 0.73
CTSA-219ENST00000607841 NRKQ7Z2Y5 1582 aa19.63■□□□□ 0.73
CTSA-219ENST00000607841 RGS17Q9UGC6 210 aaPredicted RBP19.63■□□□□ 0.73
CTSA-219ENST00000607841 NSD3Q9BZ95 1437 aa19.62■□□□□ 0.73
CTSA-219ENST00000607841 AFF2P51816 1311 aa19.62■□□□□ 0.73
CTSA-219ENST00000607841 FNBP4Q8N3X1 1017 aaPredicted RBP19.62■□□□□ 0.73
CTSA-219ENST00000607841 COG3Q96JB2 828 aa19.62■□□□□ 0.73
CTSA-219ENST00000607841 ZC3H6P61129 1189 aaKnown RBP19.61■□□□□ 0.73
CTSA-219ENST00000607841 PRDM11Q9NQV5 511 aa19.61■□□□□ 0.73
CTSA-219ENST00000607841 MYOM1P52179 1685 aa19.61■□□□□ 0.73
CTSA-219ENST00000607841 CGNL1Q0VF96 1302 aa19.6■□□□□ 0.73
CTSA-219ENST00000607841 PIK3C2AO00443 1686 aa19.6■□□□□ 0.73
CTSA-219ENST00000607841 FAM83GA6ND36 823 aa19.6■□□□□ 0.73
CTSA-219ENST00000607841 FYB1O15117 783 aa19.6■□□□□ 0.73
CTSA-219ENST00000607841 ZRANB1Q9UGI0 708 aa19.6■□□□□ 0.73
CTSA-219ENST00000607841 USP21Q9UK80 565 aa19.6■□□□□ 0.73
CTSA-219ENST00000607841 CPDO75976 1380 aa19.58■□□□□ 0.73
CTSA-219ENST00000607841 KIAA0232Q92628 1395 aa19.58■□□□□ 0.73
CTSA-219ENST00000607841 KNSTRNQ9Y448 316 aa19.58■□□□□ 0.72
CTSA-219ENST00000607841 SLIT3O75094 1523 aa19.57■□□□□ 0.72
CTSA-219ENST00000607841 SOX12O15370 315 aa19.57■□□□□ 0.72
CTSA-219ENST00000607841 GGNBP2Q9H3C7 697 aa19.57■□□□□ 0.72
CTSA-219ENST00000607841 OVOS2A0A0J9YW53 1432 aa19.56■□□□□ 0.72
CTSA-219ENST00000607841 OVOS2Q6IE36 1432 aa19.56■□□□□ 0.72
CTSA-219ENST00000607841 ABCA3Q99758 1704 aa19.56■□□□□ 0.72
CTSA-219ENST00000607841 PHRF1Q9P1Y6 1649 aaKnown RBP19.55■□□□□ 0.72
CTSA-219ENST00000607841 UNC5CLQ8IV45 518 aa19.55■□□□□ 0.72
CTSA-219ENST00000607841 BTG4Q9NY30 223 aa19.55■□□□□ 0.72
CTSA-219ENST00000607841 CRYBG1Q9Y4K1 1723 aa19.54■□□□□ 0.72
CTSA-219ENST00000607841 ZBTB7CA1YPR0 619 aa19.54■□□□□ 0.72
CTSA-219ENST00000607841 CHRNA2Q15822 529 aa19.54■□□□□ 0.72
CTSA-219ENST00000607841 POTEAQ6S8J7 498 aa19.54■□□□□ 0.72
CTSA-219ENST00000607841 ARHGEF25Q86VW2 580 aa19.54■□□□□ 0.72
CTSA-219ENST00000607841 QTRT2Q9H974 415 aaKnown RBP19.54■□□□□ 0.72
CTSA-219ENST00000607841 TRPC5Q9UL62 973 aaPredicted RBP19.54■□□□□ 0.72
CTSA-219ENST00000607841 SLIT2O94813 1529 aa19.54■□□□□ 0.72
CTSA-219ENST00000607841 NSD2O96028 1365 aa19.52■□□□□ 0.72
CTSA-219ENST00000607841 BCL9LQ86UU0 1499 aa19.52■□□□□ 0.72
CTSA-219ENST00000607841 MARF1Q9Y4F3 1742 aaKnown RBP19.51■□□□□ 0.71
CTSA-219ENST00000607841 AATKQ6ZMQ8 1374 aa19.51■□□□□ 0.71
CTSA-219ENST00000607841 COL14A1Q05707 1796 aaKnown RBP19.5■□□□□ 0.71
CTSA-219ENST00000607841 USP54Q70EL1 1684 aa19.5■□□□□ 0.71
CTSA-219ENST00000607841 PER1O15534 1290 aaPredicted RBP19.5■□□□□ 0.71
CTSA-219ENST00000607841 EVA1CP58658 441 aa19.5■□□□□ 0.71
CTSA-219ENST00000607841 RXRBP28702 533 aa19.49■□□□□ 0.71
CTSA-219ENST00000607841 NFAT5O94916 1531 aa19.48■□□□□ 0.71
CTSA-219ENST00000607841 RBM6P78332 1123 aaKnown RBP19.48■□□□□ 0.71
CTSA-219ENST00000607841 VPS72Q15906 364 aa19.48■□□□□ 0.71
CTSA-219ENST00000607841 AMER1Q5JTC6 1135 aaPredicted RBP19.47■□□□□ 0.71
CTSA-219ENST00000607841 STRN4Q9NRL3 753 aa19.47■□□□□ 0.71
CTSA-219ENST00000607841 CCDC9Q9Y3X0 531 aaKnown RBP19.47■□□□□ 0.71
CTSA-219ENST00000607841 ATRNO75882 1429 aa19.46■□□□□ 0.71
CTSA-219ENST00000607841 MORC1Q86VD1 984 aa19.46■□□□□ 0.71
CTSA-219ENST00000607841 GJD4Q96KN9 370 aaPredicted RBP19.46■□□□□ 0.71
CTSA-219ENST00000607841 AMPHP49418 695 aa19.45■□□□□ 0.7
CTSA-219ENST00000607841 NWD2Q9ULI1 1742 aa19.45■□□□□ 0.7
CTSA-219ENST00000607841 KIF20BQ96Q89 1820 aa19.44■□□□□ 0.7
CTSA-219ENST00000607841 IP6K1Q92551 441 aa19.44■□□□□ 0.7
CTSA-219ENST00000607841 AXIN2Q9Y2T1 843 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms