RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 FOXD4L1Q9NU39 408 aa6.67□□□□□ -1.34
SCARNA15-201ENST00000607520 METP08581 1390 aa6.67□□□□□ -1.34
SCARNA15-201ENST00000607520 KIF13AQ9H1H9 1805 aa6.67□□□□□ -1.34
SCARNA15-201ENST00000607520 FER1L4A9Z1Z3 1794 aa6.67□□□□□ -1.34
SCARNA15-201ENST00000607520 G3V3G9 751 aa6.67□□□□□ -1.34
SCARNA15-201ENST00000607520 DCAF8Q5TAQ9 597 aa6.67□□□□□ -1.34
SCARNA15-201ENST00000607520 SPATA31A6Q5VVP1 1343 aa6.66□□□□□ -1.34
SCARNA15-201ENST00000607520 PPIP5K1Q6PFW1 1433 aa6.66□□□□□ -1.34
SCARNA15-201ENST00000607520 PLA2R1Q13018 1463 aa6.66□□□□□ -1.34
SCARNA15-201ENST00000607520 CEP170BQ9Y4F5 1589 aaPredicted RBP6.66□□□□□ -1.34
SCARNA15-201ENST00000607520 PRDM15P57071 1507 aaPredicted RBP6.66□□□□□ -1.34
SCARNA15-201ENST00000607520 RRS1Q15050 365 aaKnown RBP6.66□□□□□ -1.34
SCARNA15-201ENST00000607520 ILDR1Q86SU0 546 aaPredicted RBP6.66□□□□□ -1.34
SCARNA15-201ENST00000607520 ANKRD24Q8TF21 1146 aa6.66□□□□□ -1.34
SCARNA15-201ENST00000607520 MTHFSP49914 203 aa6.65□□□□□ -1.34
SCARNA15-201ENST00000607520 RBM6P78332 1123 aaKnown RBP6.65□□□□□ -1.34
SCARNA15-201ENST00000607520 PUS7Q96PZ0 661 aaKnown RBP6.65□□□□□ -1.34
SCARNA15-201ENST00000607520 INO80Q9ULG1 1556 aaPredicted RBP6.65□□□□□ -1.34
SCARNA15-201ENST00000607520 KIDINS220Q9ULH0 1771 aa6.65□□□□□ -1.34
SCARNA15-201ENST00000607520 EIF2AK4Q9P2K8 1649 aaKnown RBP6.65□□□□□ -1.34
SCARNA15-201ENST00000607520 FAM98CQ17RN3 349 aaKnown RBP6.65□□□□□ -1.34
SCARNA15-201ENST00000607520 MYH16Q9H6N6 1097 aa6.65□□□□□ -1.34
SCARNA15-201ENST00000607520 HMOX1P09601 288 aa6.65□□□□□ -1.35
SCARNA15-201ENST00000607520 TMOD3Q9NYL9 352 aa6.65□□□□□ -1.35
SCARNA15-201ENST00000607520 AFF2P51816 1311 aa6.65□□□□□ -1.35
SCARNA15-201ENST00000607520 GOLGA2Q08379 1002 aa6.64□□□□□ -1.35
SCARNA15-201ENST00000607520 SULT6B1Q6IMI4 303 aa6.64□□□□□ -1.35
SCARNA15-201ENST00000607520 TCP11L2Q8N4U5 519 aa6.64□□□□□ -1.35
SCARNA15-201ENST00000607520 AMOTQ4VCS5 1084 aa6.64□□□□□ -1.35
SCARNA15-201ENST00000607520 IL2RBP14784 551 aa6.64□□□□□ -1.35
SCARNA15-201ENST00000607520 TET3O43151 1660 aa6.64□□□□□ -1.35
SCARNA15-201ENST00000607520 PLEKHG3A1L390 1219 aa6.63□□□□□ -1.35
SCARNA15-201ENST00000607520 HDAC5Q9UQL6 1122 aa6.63□□□□□ -1.35
SCARNA15-201ENST00000607520 ADGRB3O60242 1522 aa6.63□□□□□ -1.35
SCARNA15-201ENST00000607520 ZCRB1Q8TBF4 217 aaKnown RBP6.63□□□□□ -1.35
SCARNA15-201ENST00000607520 SMARCC1Q92922 1105 aaPredicted RBP6.63□□□□□ -1.35
SCARNA15-201ENST00000607520 STK32BQ9NY57 414 aa6.63□□□□□ -1.35
SCARNA15-201ENST00000607520 MPRIPQ6WCQ1 1025 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 UNC5CLQ8IV45 518 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 ROBO2Q9HCK4 1378 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 PRAG1Q86YV5 1406 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 ADGRL3Q9HAR2 1447 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 POLD1P28340 1107 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 KIF7Q2M1P5 1343 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 LMTK2Q8IWU2 1503 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 REREQ9P2R6 1566 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 BCORL1Q5H9F3 1711 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 RICTORQ6R327 1708 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 AK7Q96M32 723 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 CHMP4BQ9H444 224 aaKnown RBP6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 ZRANB1Q9UGI0 708 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 NSD3Q9BZ95 1437 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 CPS1P31327 1500 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 ZFYVE9O95405 1425 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 APBA3O96018 575 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 IFNL2Q8IZJ0 200 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 NGEFQ8N5V2 710 aa6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 MYBBP1AQ9BQG0 1328 aaKnown RBP6.62□□□□□ -1.35
SCARNA15-201ENST00000607520 PIK3C2GO75747 1445 aa6.61□□□□□ -1.35
SCARNA15-201ENST00000607520 TAF7LQ5H9L4 462 aa6.61□□□□□ -1.35
SCARNA15-201ENST00000607520 KRT27Q7Z3Y8 459 aa6.61□□□□□ -1.35
SCARNA15-201ENST00000607520 PNISRQ8TF01 805 aaKnown RBP6.61□□□□□ -1.35
SCARNA15-201ENST00000607520 FAM135BQ49AJ0 1406 aa6.61□□□□□ -1.35
SCARNA15-201ENST00000607520 BRD4O60885 1362 aaPredicted RBP6.61□□□□□ -1.35
SCARNA15-201ENST00000607520 MS4A1P11836 297 aa6.61□□□□□ -1.35
SCARNA15-201ENST00000607520 HSP90B1P14625 803 aaKnown RBP6.61□□□□□ -1.35
SCARNA15-201ENST00000607520 FAM196AQ6ZSG2 479 aa6.61□□□□□ -1.35
SCARNA15-201ENST00000607520 STARD3NLO95772 234 aa6.61□□□□□ -1.35
SCARNA15-201ENST00000607520 EIF2S2P20042 333 aaKnown RBP6.61□□□□□ -1.35
SCARNA15-201ENST00000607520 FTSJ3Q8IY81 847 aaKnown RBP6.61□□□□□ -1.35
SCARNA15-201ENST00000607520 SUPT16HQ9Y5B9 1047 aaKnown RBP6.61□□□□□ -1.35
SCARNA15-201ENST00000607520 NCOA3Q9Y6Q9 1424 aa6.6□□□□□ -1.35
SCARNA15-201ENST00000607520 CCDC7Q96M83 1385 aa6.6□□□□□ -1.35
SCARNA15-201ENST00000607520 DDX58O95786 925 aaKnown RBP6.6□□□□□ -1.35
SCARNA15-201ENST00000607520 NEXNQ0ZGT2 675 aa6.6□□□□□ -1.35
SCARNA15-201ENST00000607520 KAT6BQ8WYB5 2073 aa6.6□□□□□ -1.35
SCARNA15-201ENST00000607520 CCER2I3L3R5 266 aa6.6□□□□□ -1.35
SCARNA15-201ENST00000607520 SLC4A2P04920 1241 aa6.6□□□□□ -1.35
SCARNA15-201ENST00000607520 ACSBG1Q96GR2 724 aa6.6□□□□□ -1.35
SCARNA15-201ENST00000607520 ZC3H13Q5T200 1668 aaKnown RBP6.6□□□□□ -1.35
SCARNA15-201ENST00000607520 PLEKHH1Q9ULM0 1364 aa6.6□□□□□ -1.35
SCARNA15-201ENST00000607520 SPATA31A3Q5VYP0 1347 aa6.6□□□□□ -1.35
SCARNA15-201ENST00000607520 RIPK4P57078 832 aa6.6□□□□□ -1.35
SCARNA15-201ENST00000607520 USHBP1Q8N6Y0 703 aa6.6□□□□□ -1.35
SCARNA15-201ENST00000607520 TSPYL4Q9UJ04 414 aa6.6□□□□□ -1.35
SCARNA15-201ENST00000607520 ZPR1O75312 459 aa6.59□□□□□ -1.35
SCARNA15-201ENST00000607520 CCDC146Q8IYE0 955 aa6.59□□□□□ -1.35
SCARNA15-201ENST00000607520 SENP3-EIF4A1A0A087X0R7 540 aa6.59□□□□□ -1.35
SCARNA15-201ENST00000607520 PRKAR2BP31323 418 aa6.59□□□□□ -1.35
SCARNA15-201ENST00000607520 OS9Q13438 667 aaPredicted RBP6.59□□□□□ -1.35
SCARNA15-201ENST00000607520 SEPT12Q8IYM1 358 aa6.59□□□□□ -1.35
SCARNA15-201ENST00000607520 IP6K1Q92551 441 aa6.59□□□□□ -1.35
SCARNA15-201ENST00000607520 TFCP2L1Q9NZI6 479 aa6.59□□□□□ -1.35
SCARNA15-201ENST00000607520 NKTRP30414 1462 aaKnown RBP6.59□□□□□ -1.35
SCARNA15-201ENST00000607520 KIF6Q6ZMV9 814 aa6.59□□□□□ -1.36
SCARNA15-201ENST00000607520 CHMP3Q9Y3E7 222 aa6.59□□□□□ -1.36
SCARNA15-201ENST00000607520 EMILIN1Q9Y6C2 1016 aa6.59□□□□□ -1.36
SCARNA15-201ENST00000607520 ANKRD36BQ8N2N9 1353 aa6.59□□□□□ -1.36
SCARNA15-201ENST00000607520 IPO8O15397 1037 aaKnown RBP6.58□□□□□ -1.36
SCARNA15-201ENST00000607520 PTCD1O75127 700 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms