RNA–Protein interactions for RNA: ENST00000607443.1

RNU4-89P-201, Transcript of RNA, U4 small nuclear 89, pseudogene, humanhuman

BASIC

Gene RNU4-89P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-89P-201ENST00000607443 FAM217BQ9NTX9 383 aaPredicted RBP9.31□□□□□ -0.92
RNU4-89P-201ENST00000607443 PPFIA3O75145 1194 aa9.3□□□□□ -0.92
RNU4-89P-201ENST00000607443 MAN1A2O60476 641 aa9.29□□□□□ -0.92
RNU4-89P-201ENST00000607443 GDF11O95390 407 aa9.29□□□□□ -0.92
RNU4-89P-201ENST00000607443 RASSF7Q02833 373 aa9.29□□□□□ -0.92
RNU4-89P-201ENST00000607443 GPCPD1Q9NPB8 672 aa9.29□□□□□ -0.92
RNU4-89P-201ENST00000607443 MINK1Q8N4C8 1332 aaPredicted RBP9.29□□□□□ -0.92
RNU4-89P-201ENST00000607443 CLCN1P35523 988 aa9.27□□□□□ -0.93
RNU4-89P-201ENST00000607443 C6orf118Q5T5N4 469 aa9.25□□□□□ -0.93
RNU4-89P-201ENST00000607443 FAM174AQ8TBP5 190 aa9.25□□□□□ -0.93
RNU4-89P-201ENST00000607443 CDK15Q96Q40 435 aa9.25□□□□□ -0.93
RNU4-89P-201ENST00000607443 ZIC2O95409 532 aaPredicted RBP9.24□□□□□ -0.93
RNU4-89P-201ENST00000607443 PRR7Q8TB68 274 aa9.24□□□□□ -0.93
RNU4-89P-201ENST00000607443 ZFAND3Q9H8U3 227 aa9.24□□□□□ -0.93
RNU4-89P-201ENST00000607443 ADAMTS8Q9UP79 889 aa9.24□□□□□ -0.93
RNU4-89P-201ENST00000607443 CCDC180Q9P1Z9 1646 aa9.23□□□□□ -0.93
RNU4-89P-201ENST00000607443 DESI1Q6ICB0 168 aa9.23□□□□□ -0.93
RNU4-89P-201ENST00000607443 CCDC102AQ96A19 550 aa9.23□□□□□ -0.93
RNU4-89P-201ENST00000607443 ITPKCQ96DU7 683 aa9.23□□□□□ -0.93
RNU4-89P-201ENST00000607443 KRT76Q01546 638 aa9.22□□□□□ -0.93
RNU4-89P-201ENST00000607443 GPR161Q8N6U8 529 aaKnown RBP9.22□□□□□ -0.93
RNU4-89P-201ENST00000607443 RNF225M0QZC1 329 aaPredicted RBP9.21□□□□□ -0.94
RNU4-89P-201ENST00000607443 NDUFV2P19404 249 aa9.21□□□□□ -0.94
RNU4-89P-201ENST00000607443 ARID5BQ14865 1188 aa9.21□□□□□ -0.94
RNU4-89P-201ENST00000607443 NR3C2P08235 984 aa9.2□□□□□ -0.94
RNU4-89P-201ENST00000607443 BMP2P12643 396 aa9.2□□□□□ -0.94
RNU4-89P-201ENST00000607443 NR5A1Q13285 461 aa9.2□□□□□ -0.94
RNU4-89P-201ENST00000607443 KRI1Q8N9T8 703 aaKnown RBP9.2□□□□□ -0.94
RNU4-89P-201ENST00000607443 SPIRE2Q8WWL2 714 aa9.2□□□□□ -0.94
RNU4-89P-201ENST00000607443 CNTNAP3BQ96NU0 1288 aa9.2□□□□□ -0.94
RNU4-89P-201ENST00000607443 CNTNAP3Q9BZ76 1288 aa9.2□□□□□ -0.94
RNU4-89P-201ENST00000607443 SPDYE5A6NIY4 337 aa9.19□□□□□ -0.94
RNU4-89P-201ENST00000607443 UPP2O95045 317 aa9.19□□□□□ -0.94
RNU4-89P-201ENST00000607443 GRM5P41594 1212 aa9.19□□□□□ -0.94
RNU4-89P-201ENST00000607443 FOXJ1Q92949 421 aa9.19□□□□□ -0.94
RNU4-89P-201ENST00000607443 SOS2Q07890 1332 aaPredicted RBP9.19□□□□□ -0.94
RNU4-89P-201ENST00000607443 MOXD2PA6NHM9 499 aa9.18□□□□□ -0.94
RNU4-89P-201ENST00000607443 CTHP32929 405 aa9.18□□□□□ -0.94
RNU4-89P-201ENST00000607443 MTMR2Q13614 643 aa9.18□□□□□ -0.94
RNU4-89P-201ENST00000607443 LINC00528Q8N1L1 170 aa9.18□□□□□ -0.94
RNU4-89P-201ENST00000607443 DNMT3LQ9UJW3 386 aa9.18□□□□□ -0.94
RNU4-89P-201ENST00000607443 SPTLC1O15269 473 aa9.16□□□□□ -0.94
RNU4-89P-201ENST00000607443 SSTR3P32745 418 aaPredicted RBP9.16□□□□□ -0.94
RNU4-89P-201ENST00000607443 LYPD8Q6UX82 237 aa9.16□□□□□ -0.94
RNU4-89P-201ENST00000607443 MEIOBQ8N635 442 aa9.16□□□□□ -0.94
RNU4-89P-201ENST00000607443 ZNF385CQ66K41 422 aaPredicted RBP9.14□□□□□ -0.95
RNU4-89P-201ENST00000607443 COL25A1Q9BXS0 654 aaPredicted RBP9.14□□□□□ -0.95
RNU4-89P-201ENST00000607443 C4orf48Q5BLP8 95 aa9.13□□□□□ -0.95
RNU4-89P-201ENST00000607443 IGHA1P01876 353 aa9.12□□□□□ -0.95
RNU4-89P-201ENST00000607443 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.12□□□□□ -0.95
RNU4-89P-201ENST00000607443 GPAT2Q6NUI2 795 aa9.12□□□□□ -0.95
RNU4-89P-201ENST00000607443 NANOS1Q8WY41 292 aaKnown RBP9.12□□□□□ -0.95
RNU4-89P-201ENST00000607443 TSEN34Q9BSV6 310 aaKnown RBP9.12□□□□□ -0.95
RNU4-89P-201ENST00000607443 DNMT3AQ9Y6K1 912 aaPredicted RBP9.12□□□□□ -0.95
RNU4-89P-201ENST00000607443 F12P00748 615 aaPredicted RBP9.11□□□□□ -0.95
RNU4-89P-201ENST00000607443 IRS1P35568 1242 aa9.11□□□□□ -0.95
RNU4-89P-201ENST00000607443 PTSQ03393 145 aa9.11□□□□□ -0.95
RNU4-89P-201ENST00000607443 AGERQ15109 404 aa9.11□□□□□ -0.95
RNU4-89P-201ENST00000607443 SVOPQ8N4V2 548 aa9.11□□□□□ -0.95
RNU4-89P-201ENST00000607443 MAP10Q9P2G4 905 aa9.11□□□□□ -0.95
RNU4-89P-201ENST00000607443 RNFT1Q5M7Z0 435 aa9.1□□□□□ -0.95
RNU4-89P-201ENST00000607443 BPHLQ86WA6 291 aaPredicted RBP9.1□□□□□ -0.95
RNU4-89P-201ENST00000607443 ABCC9O60706 1549 aa9.1□□□□□ -0.95
RNU4-89P-201ENST00000607443 TTLL8A6PVC2 850 aa9.09□□□□□ -0.95
RNU4-89P-201ENST00000607443 TULP1O00294 542 aaPredicted RBP9.09□□□□□ -0.95
RNU4-89P-201ENST00000607443 ARHGEF15O94989 841 aa9.09□□□□□ -0.95
RNU4-89P-201ENST00000607443 WHAMMQ8TF30 809 aa9.09□□□□□ -0.95
RNU4-89P-201ENST00000607443 SLURP2P0DP57 97 aa9.08□□□□□ -0.96
RNU4-89P-201ENST00000607443 GJA5P36382 358 aa9.08□□□□□ -0.96
RNU4-89P-201ENST00000607443 CFAP99D6REC4 459 aa9.07□□□□□ -0.96
RNU4-89P-201ENST00000607443 FIGNL2A6NMB9 653 aa9.06□□□□□ -0.96
RNU4-89P-201ENST00000607443 FOXK2Q01167 660 aa9.06□□□□□ -0.96
RNU4-89P-201ENST00000607443 KANK3Q6NY19 840 aa9.06□□□□□ -0.96
RNU4-89P-201ENST00000607443 CCDC155Q8N6L0 562 aa9.06□□□□□ -0.96
RNU4-89P-201ENST00000607443 MARSP56192 900 aaKnown RBP9.05□□□□□ -0.96
RNU4-89P-201ENST00000607443 C1QTNF2Q9BXJ5 285 aa9.05□□□□□ -0.96
RNU4-89P-201ENST00000607443 PCDHB15Q9Y5E8 787 aa9.05□□□□□ -0.96
RNU4-89P-201ENST00000607443 EMILIN1Q9Y6C2 1016 aa9.05□□□□□ -0.96
RNU4-89P-201ENST00000607443 FSHRP23945 695 aa9.04□□□□□ -0.96
RNU4-89P-201ENST00000607443 RSBN1LQ6PCB5 846 aaPredicted RBP9.04□□□□□ -0.96
RNU4-89P-201ENST00000607443 MAP4K5Q9Y4K4 846 aa9.04□□□□□ -0.96
RNU4-89P-201ENST00000607443 SLC35F4A4IF30 521 aa9.03□□□□□ -0.96
RNU4-89P-201ENST00000607443 VASH1Q7L8A9 365 aaPredicted RBP9.03□□□□□ -0.96
RNU4-89P-201ENST00000607443 VWA5B2Q8N398 1253 aa9.03□□□□□ -0.96
RNU4-89P-201ENST00000607443 HRCP23327 699 aa9.02□□□□□ -0.97
RNU4-89P-201ENST00000607443 XP32Q5T750 250 aa9.02□□□□□ -0.97
RNU4-89P-201ENST00000607443 SH3RF1Q7Z6J0 888 aa9.02□□□□□ -0.97
RNU4-89P-201ENST00000607443 CCDC116Q8IYX3 515 aa9.02□□□□□ -0.97
RNU4-89P-201ENST00000607443 SCARF2Q96GP6 870 aaPredicted RBP9.02□□□□□ -0.97
RNU4-89P-201ENST00000607443 BEGAINQ9BUH8 593 aa9.02□□□□□ -0.97
RNU4-89P-201ENST00000607443 TBC1D2Q9BYX2 928 aa9.02□□□□□ -0.97
RNU4-89P-201ENST00000607443 ITGA6P23229 1130 aa9.01□□□□□ -0.97
RNU4-89P-201ENST00000607443 PLCB2Q00722 1185 aa9.01□□□□□ -0.97
RNU4-89P-201ENST00000607443 SV2AQ7L0J3 742 aa9.01□□□□□ -0.97
RNU4-89P-201ENST00000607443 TRMT44Q8IYL2 757 aaKnown RBP9.01□□□□□ -0.97
RNU4-89P-201ENST00000607443 ZBTB3Q9H5J0 574 aa9.01□□□□□ -0.97
RNU4-89P-201ENST00000607443 PER1O15534 1290 aaPredicted RBP9□□□□□ -0.97
RNU4-89P-201ENST00000607443 SPINT1O43278 529 aa9□□□□□ -0.97
RNU4-89P-201ENST00000607443 TTLL12Q14166 644 aaPredicted RBP9□□□□□ -0.97
RNU4-89P-201ENST00000607443 DIXDC1Q155Q3 683 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms