RNA–Protein interactions for RNA: ENST00000606815.1

RN7SKP4-201, Transcript of RNA, 7SK small nuclear pseudogene 4, humanhuman

BASIC

Gene RN7SKP4, Length 322 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP4-201ENST00000606815 PHF23Q9BUL5 403 aaPredicted RBP12.8□□□□□ -0.36
RN7SKP4-201ENST00000606815 PHF8Q9UPP1 1060 aa12.8□□□□□ -0.36
RN7SKP4-201ENST00000606815 TTC21BQ7Z4L5 1316 aa12.8□□□□□ -0.36
RN7SKP4-201ENST00000606815 USP6P35125 1406 aa12.79□□□□□ -0.36
RN7SKP4-201ENST00000606815 SSH2Q76I76 1423 aa12.79□□□□□ -0.36
RN7SKP4-201ENST00000606815 XIRP1Q702N8 1843 aaKnown RBP12.78□□□□□ -0.36
RN7SKP4-201ENST00000606815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.78□□□□□ -0.36
RN7SKP4-201ENST00000606815 PMFBP1Q8TBY8 1022 aa12.78□□□□□ -0.36
RN7SKP4-201ENST00000606815 COG3Q96JB2 828 aa12.78□□□□□ -0.36
RN7SKP4-201ENST00000606815 GGNBP2Q9H3C7 697 aa12.78□□□□□ -0.36
RN7SKP4-201ENST00000606815 FMN2Q9NZ56 1722 aa12.78□□□□□ -0.36
RN7SKP4-201ENST00000606815 TOPAZ1Q8N9V7 1692 aa12.77□□□□□ -0.36
RN7SKP4-201ENST00000606815 ESCO1Q5FWF5 840 aa12.77□□□□□ -0.37
RN7SKP4-201ENST00000606815 FAM9BQ8IZU0 186 aa12.77□□□□□ -0.37
RN7SKP4-201ENST00000606815 CFAP53Q96M91 514 aa12.77□□□□□ -0.37
RN7SKP4-201ENST00000606815 YTHDC1Q96MU7 727 aaKnown RBP12.77□□□□□ -0.37
RN7SKP4-201ENST00000606815 AATKQ6ZMQ8 1374 aa12.77□□□□□ -0.37
RN7SKP4-201ENST00000606815 MTHFSP49914 203 aa12.76□□□□□ -0.37
RN7SKP4-201ENST00000606815 USP31Q70CQ4 1352 aa12.76□□□□□ -0.37
RN7SKP4-201ENST00000606815 PSME1Q06323 249 aa12.75□□□□□ -0.37
RN7SKP4-201ENST00000606815 ITSN1Q15811 1721 aa12.75□□□□□ -0.37
RN7SKP4-201ENST00000606815 C1orf167Q5SNV9 1468 aa12.75□□□□□ -0.37
RN7SKP4-201ENST00000606815 NME9Q86XW9 330 aa12.75□□□□□ -0.37
RN7SKP4-201ENST00000606815 NALCNQ8IZF0 1738 aa12.75□□□□□ -0.37
RN7SKP4-201ENST00000606815 WDR43Q15061 677 aaKnown RBP eCLIP12.74□□□□□ -0.37
RN7SKP4-201ENST00000606815 AKAP12Q02952 1782 aa12.74□□□□□ -0.37
RN7SKP4-201ENST00000606815 PNPLA6Q8IY17 1366 aa12.73□□□□□ -0.37
RN7SKP4-201ENST00000606815 MON2Q7Z3U7 1717 aa12.73□□□□□ -0.37
RN7SKP4-201ENST00000606815 MST1RQ04912 1400 aa12.72□□□□□ -0.37
RN7SKP4-201ENST00000606815 TNNT2P45379 298 aaPredicted RBP12.72□□□□□ -0.37
RN7SKP4-201ENST00000606815 ORAI2Q96SN7 254 aa12.72□□□□□ -0.37
RN7SKP4-201ENST00000606815 HNRNPUQ00839 825 aaKnown RBP eCLIP12.71□□□□□ -0.37
RN7SKP4-201ENST00000606815 NGEFQ8N5V2 710 aa12.71□□□□□ -0.37
RN7SKP4-201ENST00000606815 POLKQ9UBT6 870 aa12.71□□□□□ -0.37
RN7SKP4-201ENST00000606815 ADAMTS8Q9UP79 889 aa12.71□□□□□ -0.37
RN7SKP4-201ENST00000606815 NUDCQ9Y266 331 aa12.71□□□□□ -0.37
RN7SKP4-201ENST00000606815 SOCS7O14512 581 aa12.7□□□□□ -0.38
RN7SKP4-201ENST00000606815 FOXO3O43524 673 aa12.7□□□□□ -0.38
RN7SKP4-201ENST00000606815 ABTB2Q8N961 1025 aa12.7□□□□□ -0.38
RN7SKP4-201ENST00000606815 OVOS2A0A0J9YW53 1432 aa12.7□□□□□ -0.38
RN7SKP4-201ENST00000606815 OVOS2Q6IE36 1432 aa12.7□□□□□ -0.38
RN7SKP4-201ENST00000606815 ZBED9Q6R2W3 1325 aa12.69□□□□□ -0.38
RN7SKP4-201ENST00000606815 NPHP3Q7Z494 1330 aa12.69□□□□□ -0.38
RN7SKP4-201ENST00000606815 NLRP6P59044 892 aa12.69□□□□□ -0.38
RN7SKP4-201ENST00000606815 KRT28Q7Z3Y7 464 aa12.69□□□□□ -0.38
RN7SKP4-201ENST00000606815 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
RN7SKP4-201ENST00000606815 ROBO1Q9Y6N7 1651 aa12.69□□□□□ -0.38
RN7SKP4-201ENST00000606815 ANKRD26Q9UPS8 1709 aa12.68□□□□□ -0.38
RN7SKP4-201ENST00000606815 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
RN7SKP4-201ENST00000606815 PNNQ9H307 717 aaKnown RBP12.68□□□□□ -0.38
RN7SKP4-201ENST00000606815 SMG6Q86US8 1419 aaKnown RBP12.68□□□□□ -0.38
RN7SKP4-201ENST00000606815 NRKQ7Z2Y5 1582 aa12.68□□□□□ -0.38
RN7SKP4-201ENST00000606815 SBNO1A3KN83 1393 aa12.68□□□□□ -0.38
RN7SKP4-201ENST00000606815 KIF24Q5T7B8 1368 aa12.68□□□□□ -0.38
RN7SKP4-201ENST00000606815 DIAPH1O60610 1272 aaKnown RBP12.67□□□□□ -0.38
RN7SKP4-201ENST00000606815 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
RN7SKP4-201ENST00000606815 KCNH5Q8NCM2 988 aa12.67□□□□□ -0.38
RN7SKP4-201ENST00000606815 MED1Q15648 1581 aaPredicted RBP12.67□□□□□ -0.38
RN7SKP4-201ENST00000606815 KIF20BQ96Q89 1820 aa12.67□□□□□ -0.38
RN7SKP4-201ENST00000606815 RGPD8O14715 1765 aaPredicted RBP12.66□□□□□ -0.38
RN7SKP4-201ENST00000606815 BLMP54132 1417 aaPredicted RBP12.66□□□□□ -0.38
RN7SKP4-201ENST00000606815 KIF1AQ12756 1690 aa12.66□□□□□ -0.38
RN7SKP4-201ENST00000606815 NUTM2BA6NNL0 878 aaPredicted RBP12.65□□□□□ -0.38
RN7SKP4-201ENST00000606815 NUTM2EB1AL46 878 aaPredicted RBP12.65□□□□□ -0.38
RN7SKP4-201ENST00000606815 MEX3CQ5U5Q3 659 aaKnown RBP12.65□□□□□ -0.38
RN7SKP4-201ENST00000606815 BRINP3Q76B58 766 aa12.65□□□□□ -0.38
RN7SKP4-201ENST00000606815 NUTM2AQ8IVF1 878 aaPredicted RBP12.65□□□□□ -0.38
RN7SKP4-201ENST00000606815 PHLPP1O60346 1717 aa12.64□□□□□ -0.39
RN7SKP4-201ENST00000606815 CDK12Q9NYV4 1490 aaPredicted RBP12.64□□□□□ -0.39
RN7SKP4-201ENST00000606815 PPM1GO15355 546 aaPredicted RBP12.63□□□□□ -0.39
RN7SKP4-201ENST00000606815 FCHSD2O94868 740 aa12.63□□□□□ -0.39
RN7SKP4-201ENST00000606815 IL13P35225 146 aa12.63□□□□□ -0.39
RN7SKP4-201ENST00000606815 PDE3BQ13370 1112 aa12.63□□□□□ -0.39
RN7SKP4-201ENST00000606815 RRS1Q15050 365 aaKnown RBP12.63□□□□□ -0.39
RN7SKP4-201ENST00000606815 DDX17Q92841 729 aaKnown RBP12.63□□□□□ -0.39
RN7SKP4-201ENST00000606815 RUNDC1Q96C34 613 aa12.63□□□□□ -0.39
RN7SKP4-201ENST00000606815 EMILIN1Q9Y6C2 1016 aa12.63□□□□□ -0.39
RN7SKP4-201ENST00000606815 JCADQ9P266 1359 aa12.63□□□□□ -0.39
RN7SKP4-201ENST00000606815 COL3A1P02461 1466 aaPredicted RBP12.62□□□□□ -0.39
RN7SKP4-201ENST00000606815 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
RN7SKP4-201ENST00000606815 FBLN1P23142 703 aa12.62□□□□□ -0.39
RN7SKP4-201ENST00000606815 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
RN7SKP4-201ENST00000606815 USP19O94966 1318 aa12.62□□□□□ -0.39
RN7SKP4-201ENST00000606815 SOS2Q07890 1332 aaPredicted RBP12.62□□□□□ -0.39
RN7SKP4-201ENST00000606815 MAP3K19Q56UN5 1328 aa12.62□□□□□ -0.39
RN7SKP4-201ENST00000606815 ARHGEF10O15013 1369 aa12.61□□□□□ -0.39
RN7SKP4-201ENST00000606815 AMPHP49418 695 aa12.61□□□□□ -0.39
RN7SKP4-201ENST00000606815 LRRC59Q96AG4 307 aaKnown RBP12.61□□□□□ -0.39
RN7SKP4-201ENST00000606815 USP54Q70EL1 1684 aa12.61□□□□□ -0.39
RN7SKP4-201ENST00000606815 FLT4P35916 1363 aa12.6□□□□□ -0.39
RN7SKP4-201ENST00000606815 GCP02774 474 aa12.6□□□□□ -0.39
RN7SKP4-201ENST00000606815 RGS17Q9UGC6 210 aaPredicted RBP12.6□□□□□ -0.39
RN7SKP4-201ENST00000606815 SPATA31A3Q5VYP0 1347 aa12.6□□□□□ -0.39
RN7SKP4-201ENST00000606815 RTL1A6NKG5 1358 aa12.59□□□□□ -0.39
RN7SKP4-201ENST00000606815 PIK3C2AO00443 1686 aa12.59□□□□□ -0.39
RN7SKP4-201ENST00000606815 U2SURPO15042 1029 aaKnown RBP12.59□□□□□ -0.39
RN7SKP4-201ENST00000606815 XPCQ01831 940 aaPredicted RBP12.59□□□□□ -0.39
RN7SKP4-201ENST00000606815 NUTM2GQ5VZR2 741 aa12.59□□□□□ -0.39
RN7SKP4-201ENST00000606815 IP6K1Q92551 441 aa12.59□□□□□ -0.39
RN7SKP4-201ENST00000606815 CCDC27Q2M243 656 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms