RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 PRKAR2BP31323 418 aa20.61■□□□□ 0.89
CTSA-214ENST00000606788 TMPOP42166 694 aaKnown RBP20.61■□□□□ 0.89
CTSA-214ENST00000606788 ROBO2Q9HCK4 1378 aa20.61■□□□□ 0.89
CTSA-214ENST00000606788 PRR36Q9H6K5 1346 aa20.61■□□□□ 0.89
CTSA-214ENST00000606788 HDGFP51858 240 aaKnown RBP20.61■□□□□ 0.89
CTSA-214ENST00000606788 TMEM2Q9UHN6 1383 aa20.6■□□□□ 0.89
CTSA-214ENST00000606788 TCERG1O14776 1098 aaKnown RBP20.59■□□□□ 0.89
CTSA-214ENST00000606788 RLBP1P12271 317 aa20.59■□□□□ 0.89
CTSA-214ENST00000606788 CCDC61Q9Y6R9 512 aa20.59■□□□□ 0.89
CTSA-214ENST00000606788 NSD2O96028 1365 aa20.59■□□□□ 0.89
CTSA-214ENST00000606788 EXOSC9Q06265 439 aaKnown RBP20.59■□□□□ 0.89
CTSA-214ENST00000606788 FANCIQ9NVI1 1328 aa20.58■□□□□ 0.89
CTSA-214ENST00000606788 ELL2O00472 640 aaPredicted RBP20.58■□□□□ 0.89
CTSA-214ENST00000606788 PDE4AP27815 886 aa20.58■□□□□ 0.89
CTSA-214ENST00000606788 RARSP54136 660 aaKnown RBP20.58■□□□□ 0.89
CTSA-214ENST00000606788 PHACTR3Q96KR7 559 aa20.58■□□□□ 0.88
CTSA-214ENST00000606788 PAK3O75914 559 aaPredicted RBP20.57■□□□□ 0.88
CTSA-214ENST00000606788 PLEKHF1Q96S99 279 aa20.57■□□□□ 0.88
CTSA-214ENST00000606788 TRIM35Q9UPQ4 493 aa20.57■□□□□ 0.88
CTSA-214ENST00000606788 EID1Q9Y6B2 187 aa20.57■□□□□ 0.88
CTSA-214ENST00000606788 NUTM2GQ5VZR2 741 aa20.56■□□□□ 0.88
CTSA-214ENST00000606788 COG3Q96JB2 828 aa20.56■□□□□ 0.88
CTSA-214ENST00000606788 AMOTL2Q9Y2J4 779 aa20.56■□□□□ 0.88
CTSA-214ENST00000606788 REREQ9P2R6 1566 aa20.56■□□□□ 0.88
CTSA-214ENST00000606788 NINLQ9Y2I6 1382 aa20.55■□□□□ 0.88
CTSA-214ENST00000606788 IGHDP01880 384 aa20.55■□□□□ 0.88
CTSA-214ENST00000606788 NLRP1Q9C000 1473 aa20.54■□□□□ 0.88
CTSA-214ENST00000606788 ANP32AP39687 249 aaKnown RBP20.53■□□□□ 0.88
CTSA-214ENST00000606788 WDR63Q8IWG1 891 aa20.53■□□□□ 0.88
CTSA-214ENST00000606788 DCTN1Q14203 1278 aa20.52■□□□□ 0.88
CTSA-214ENST00000606788 BCL11AQ9H165 835 aa20.52■□□□□ 0.88
CTSA-214ENST00000606788 MYH16Q9H6N6 1097 aa20.52■□□□□ 0.88
CTSA-214ENST00000606788 SMC4Q9NTJ3 1288 aa20.52■□□□□ 0.88
CTSA-214ENST00000606788 ACEP12821 1306 aa20.51■□□□□ 0.87
CTSA-214ENST00000606788 NRXN3Q9Y4C0 1643 aa20.51■□□□□ 0.87
CTSA-214ENST00000606788 FAM83GA6ND36 823 aa20.51■□□□□ 0.87
CTSA-214ENST00000606788 PHF23Q9BUL5 403 aaPredicted RBP20.51■□□□□ 0.87
CTSA-214ENST00000606788 IQSEC2Q5JU85 1478 aa20.5■□□□□ 0.87
CTSA-214ENST00000606788 NEFMP07197 916 aa20.5■□□□□ 0.87
CTSA-214ENST00000606788 AEBP1Q8IUX7 1158 aa20.5■□□□□ 0.87
CTSA-214ENST00000606788 KDM2BQ8NHM5 1336 aa20.49■□□□□ 0.87
CTSA-214ENST00000606788 C14orf37Q86TY3 774 aa20.49■□□□□ 0.87
CTSA-214ENST00000606788 ADAMTS13Q76LX8 1427 aa20.49■□□□□ 0.87
CTSA-214ENST00000606788 CPS1P31327 1500 aa20.48■□□□□ 0.87
CTSA-214ENST00000606788 NBR1Q14596 966 aa20.48■□□□□ 0.87
CTSA-214ENST00000606788 CENPQQ7L2Z9 268 aaPredicted RBP20.48■□□□□ 0.87
CTSA-214ENST00000606788 FTSJ3Q8IY81 847 aaKnown RBP20.48■□□□□ 0.87
CTSA-214ENST00000606788 NGEFQ8N5V2 710 aa20.48■□□□□ 0.87
CTSA-214ENST00000606788 SSH1Q8WYL5 1049 aa20.47■□□□□ 0.87
CTSA-214ENST00000606788 USP32Q8NFA0 1604 aa20.47■□□□□ 0.87
CTSA-214ENST00000606788 NGDNQ8NEJ9 315 aaKnown RBP20.47■□□□□ 0.87
CTSA-214ENST00000606788 RSPH6AQ9H0K4 717 aa20.47■□□□□ 0.87
CTSA-214ENST00000606788 BACH2Q9BYV9 841 aa20.47■□□□□ 0.87
CTSA-214ENST00000606788 PTPRUQ92729 1446 aa20.45■□□□□ 0.86
CTSA-214ENST00000606788 COL3A1P02461 1466 aaPredicted RBP20.45■□□□□ 0.86
CTSA-214ENST00000606788 HSP90AB2PQ58FF8 381 aa20.45■□□□□ 0.86
CTSA-214ENST00000606788 PCDHB15Q9Y5E8 787 aa20.45■□□□□ 0.86
CTSA-214ENST00000606788 CCDC27Q2M243 656 aa20.45■□□□□ 0.86
CTSA-214ENST00000606788 SETD1AO15047 1707 aaKnown RBP20.44■□□□□ 0.86
CTSA-214ENST00000606788 KCNA6P17658 529 aa20.44■□□□□ 0.86
CTSA-214ENST00000606788 ZBTB7CA1YPR0 619 aa20.44■□□□□ 0.86
CTSA-214ENST00000606788 ITPRIPQ8IWB1 547 aa20.43■□□□□ 0.86
CTSA-214ENST00000606788 NOP58Q9Y2X3 529 aaKnown RBP20.43■□□□□ 0.86
CTSA-214ENST00000606788 FCHSD2O94868 740 aa20.43■□□□□ 0.86
CTSA-214ENST00000606788 IL13P35225 146 aa20.43■□□□□ 0.86
CTSA-214ENST00000606788 SULT6B1Q6IMI4 303 aa20.43■□□□□ 0.86
CTSA-214ENST00000606788 TTC21BQ7Z4L5 1316 aa20.43■□□□□ 0.86
CTSA-214ENST00000606788 NOB1Q9ULX3 412 aaKnown RBP20.42■□□□□ 0.86
CTSA-214ENST00000606788 SLC4A3P48751 1232 aa20.42■□□□□ 0.86
CTSA-214ENST00000606788 PDE3AQ14432 1141 aa20.42■□□□□ 0.86
CTSA-214ENST00000606788 THEMISQ8N1K5 641 aaPredicted RBP20.42■□□□□ 0.86
CTSA-214ENST00000606788 CPSF1Q10570 1443 aaKnown RBP20.42■□□□□ 0.86
CTSA-214ENST00000606788 EDC4Q6P2E9 1401 aaKnown RBP20.42■□□□□ 0.86
CTSA-214ENST00000606788 TSPYL6Q8N831 410 aa20.42■□□□□ 0.86
CTSA-214ENST00000606788 DLC1Q96QB1 1528 aa20.41■□□□□ 0.86
CTSA-214ENST00000606788 UBR1Q8IWV7 1749 aa20.41■□□□□ 0.86
CTSA-214ENST00000606788 MAP2P11137 1827 aaKnown RBP20.4■□□□□ 0.86
CTSA-214ENST00000606788 ATP7BP35670 1465 aa20.4■□□□□ 0.86
CTSA-214ENST00000606788 ZKSCAN2Q63HK3 967 aa20.4■□□□□ 0.86
CTSA-214ENST00000606788 LTV1Q96GA3 475 aaPredicted RBP20.4■□□□□ 0.86
CTSA-214ENST00000606788 TRIM27P14373 513 aa20.4■□□□□ 0.86
CTSA-214ENST00000606788 IPO9Q96P70 1041 aaKnown RBP20.4■□□□□ 0.86
CTSA-214ENST00000606788 ZBTB47Q9UFB7 747 aaPredicted RBP20.4■□□□□ 0.86
CTSA-214ENST00000606788 PNPLA6Q8IY17 1366 aa20.39■□□□□ 0.85
CTSA-214ENST00000606788 PLEKHG1Q9ULL1 1385 aa20.39■□□□□ 0.85
CTSA-214ENST00000606788 DZIP1LQ8IYY4 767 aaKnown RBP20.38■□□□□ 0.85
CTSA-214ENST00000606788 EIF4A2Q14240 407 aaKnown RBP20.38■□□□□ 0.85
CTSA-214ENST00000606788 NFE2L2Q16236 605 aa20.38■□□□□ 0.85
CTSA-214ENST00000606788 KRT24Q2M2I5 525 aa20.38■□□□□ 0.85
CTSA-214ENST00000606788 LRRC7Q96NW7 1537 aa20.38■□□□□ 0.85
CTSA-214ENST00000606788 ZNF692Q9BU19 519 aaPredicted RBP20.38■□□□□ 0.85
CTSA-214ENST00000606788 MCM10Q7L590 875 aa20.37■□□□□ 0.85
CTSA-214ENST00000606788 FAM135BQ49AJ0 1406 aa20.36■□□□□ 0.85
CTSA-214ENST00000606788 MIS18AQ9NYP9 233 aa20.36■□□□□ 0.85
CTSA-214ENST00000606788 KIF20BQ96Q89 1820 aa20.36■□□□□ 0.85
CTSA-214ENST00000606788 PNNQ9H307 717 aaKnown RBP20.35■□□□□ 0.85
CTSA-214ENST00000606788 MS4A1P11836 297 aa20.35■□□□□ 0.85
CTSA-214ENST00000606788 NLRP6P59044 892 aa20.35■□□□□ 0.85
CTSA-214ENST00000606788 XPCQ01831 940 aaPredicted RBP20.35■□□□□ 0.85
CTSA-214ENST00000606788 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms