RNA–Protein interactions for RNA: ENST00000605551.2

SRGAP2D-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2D (pseudogene), humanhuman

BASIC

Gene SRGAP2D, Length 1,021 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2D-201ENST00000605551 PRR36Q9H6K5 1346 aa13.05□□□□□ -0.32
SRGAP2D-201ENST00000605551 BRWD3Q6RI45 1802 aa13.04□□□□□ -0.32
SRGAP2D-201ENST00000605551 KRT27Q7Z3Y8 459 aa13.04□□□□□ -0.32
SRGAP2D-201ENST00000605551 NUDT16Q96DE0 195 aaKnown RBP13.04□□□□□ -0.32
SRGAP2D-201ENST00000605551 BTG4Q9NY30 223 aa13.04□□□□□ -0.32
SRGAP2D-201ENST00000605551 FAM83GA6ND36 823 aa13.03□□□□□ -0.32
SRGAP2D-201ENST00000605551 NRAPQ86VF7 1730 aa13.02□□□□□ -0.32
SRGAP2D-201ENST00000605551 CDK19Q9BWU1 502 aa13.01□□□□□ -0.33
SRGAP2D-201ENST00000605551 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
SRGAP2D-201ENST00000605551 TOPAZ1Q8N9V7 1692 aa13□□□□□ -0.33
SRGAP2D-201ENST00000605551 ONECUT3O60422 494 aaPredicted RBP13□□□□□ -0.33
SRGAP2D-201ENST00000605551 BAG6P46379 1132 aa13□□□□□ -0.33
SRGAP2D-201ENST00000605551 SRPK2P78362 688 aaKnown RBP13□□□□□ -0.33
SRGAP2D-201ENST00000605551 FAM98CQ17RN3 349 aaKnown RBP13□□□□□ -0.33
SRGAP2D-201ENST00000605551 CENPJQ9HC77 1338 aaPredicted RBP12.99□□□□□ -0.33
SRGAP2D-201ENST00000605551 CRYBG1Q9Y4K1 1723 aa12.99□□□□□ -0.33
SRGAP2D-201ENST00000605551 PHRF1Q9P1Y6 1649 aaKnown RBP12.99□□□□□ -0.33
SRGAP2D-201ENST00000605551 POLR3AO14802 1390 aaPredicted RBP12.97□□□□□ -0.33
SRGAP2D-201ENST00000605551 BRD4O60885 1362 aaPredicted RBP12.97□□□□□ -0.33
SRGAP2D-201ENST00000605551 KIAA0232Q92628 1395 aa12.97□□□□□ -0.33
SRGAP2D-201ENST00000605551 RGPD1P0DJD0 1748 aa12.97□□□□□ -0.33
SRGAP2D-201ENST00000605551 ACEP12821 1306 aa12.97□□□□□ -0.33
SRGAP2D-201ENST00000605551 SPATA31A5Q5VU36 1347 aa12.97□□□□□ -0.33
SRGAP2D-201ENST00000605551 SPATA31A7Q8IWB4 1347 aa12.97□□□□□ -0.33
SRGAP2D-201ENST00000605551 STRN4Q9NRL3 753 aa12.97□□□□□ -0.33
SRGAP2D-201ENST00000605551 QRICH2Q9H0J4 1663 aa12.96□□□□□ -0.33
SRGAP2D-201ENST00000605551 PLEKHG3A1L390 1219 aa12.96□□□□□ -0.33
SRGAP2D-201ENST00000605551 EVA1CP58658 441 aa12.96□□□□□ -0.33
SRGAP2D-201ENST00000605551 NBPF8Q3BBV2 869 aa12.96□□□□□ -0.33
SRGAP2D-201ENST00000605551 ABTB2Q8N961 1025 aa12.96□□□□□ -0.33
SRGAP2D-201ENST00000605551 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.34
SRGAP2D-201ENST00000605551 ZC3H6P61129 1189 aaKnown RBP12.95□□□□□ -0.34
SRGAP2D-201ENST00000605551 NUTM2GQ5VZR2 741 aa12.95□□□□□ -0.34
SRGAP2D-201ENST00000605551 DEFB132Q7Z7B7 95 aa12.95□□□□□ -0.34
SRGAP2D-201ENST00000605551 NLRP13Q86W25 1043 aa12.95□□□□□ -0.34
SRGAP2D-201ENST00000605551 CHRNA2Q15822 529 aa12.94□□□□□ -0.34
SRGAP2D-201ENST00000605551 NBPF1Q3BBV0 1214 aa12.94□□□□□ -0.34
SRGAP2D-201ENST00000605551 NRKQ7Z2Y5 1582 aa12.94□□□□□ -0.34
SRGAP2D-201ENST00000605551 THSD7AQ9UPZ6 1657 aa12.93□□□□□ -0.34
SRGAP2D-201ENST00000605551 EP400Q96L91 3159 aa12.93□□□□□ -0.34
SRGAP2D-201ENST00000605551 SPATA31A1Q5TZJ5 1347 aa12.92□□□□□ -0.34
SRGAP2D-201ENST00000605551 EVC2Q86UK5 1308 aa12.92□□□□□ -0.34
SRGAP2D-201ENST00000605551 SSH2Q76I76 1423 aa12.92□□□□□ -0.34
SRGAP2D-201ENST00000605551 ROCK2O75116 1388 aaKnown RBP12.92□□□□□ -0.34
SRGAP2D-201ENST00000605551 CPDO75976 1380 aa12.92□□□□□ -0.34
SRGAP2D-201ENST00000605551 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
SRGAP2D-201ENST00000605551 FAM196AQ6ZSG2 479 aa12.91□□□□□ -0.34
SRGAP2D-201ENST00000605551 CABP2Q9NPB3 220 aa12.91□□□□□ -0.34
SRGAP2D-201ENST00000605551 USP35Q9P2H5 1018 aa12.91□□□□□ -0.34
SRGAP2D-201ENST00000605551 USP19O94966 1318 aa12.9□□□□□ -0.34
SRGAP2D-201ENST00000605551 L3MBTL2Q969R5 705 aa12.9□□□□□ -0.34
SRGAP2D-201ENST00000605551 TRPM1Q7Z4N2 1603 aa12.89□□□□□ -0.35
SRGAP2D-201ENST00000605551 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
SRGAP2D-201ENST00000605551 C11orf95C9JLR9 678 aaPredicted RBP12.89□□□□□ -0.35
SRGAP2D-201ENST00000605551 BARGINQ6ZT62 677 aa12.89□□□□□ -0.35
SRGAP2D-201ENST00000605551 TCP11L2Q8N4U5 519 aa12.89□□□□□ -0.35
SRGAP2D-201ENST00000605551 THRAP3Q9Y2W1 955 aaKnown RBP12.89□□□□□ -0.35
SRGAP2D-201ENST00000605551 DISP2A7MBM2 1401 aa12.88□□□□□ -0.35
SRGAP2D-201ENST00000605551 USP6P35125 1406 aa12.88□□□□□ -0.35
SRGAP2D-201ENST00000605551 GCP02774 474 aa12.88□□□□□ -0.35
SRGAP2D-201ENST00000605551 NLRP6P59044 892 aa12.88□□□□□ -0.35
SRGAP2D-201ENST00000605551 NEUROD1Q13562 356 aa12.88□□□□□ -0.35
SRGAP2D-201ENST00000605551 CABP1Q9NZU7 370 aa12.88□□□□□ -0.35
SRGAP2D-201ENST00000605551 LRP5O75197 1615 aa12.88□□□□□ -0.35
SRGAP2D-201ENST00000605551 PARD3Q8TEW0 1356 aa12.87□□□□□ -0.35
SRGAP2D-201ENST00000605551 EN1Q05925 392 aaPredicted RBP12.87□□□□□ -0.35
SRGAP2D-201ENST00000605551 TNS1Q9HBL0 1735 aaKnown RBP12.87□□□□□ -0.35
SRGAP2D-201ENST00000605551 LMO7Q8WWI1 1683 aa12.86□□□□□ -0.35
SRGAP2D-201ENST00000605551 FAM182BQ5T319 152 aa12.86□□□□□ -0.35
SRGAP2D-201ENST00000605551 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
SRGAP2D-201ENST00000605551 CRB1P82279 1406 aa12.86□□□□□ -0.35
SRGAP2D-201ENST00000605551 CAMTA1Q9Y6Y1 1673 aa12.86□□□□□ -0.35
SRGAP2D-201ENST00000605551 PSDA5PKW4 1024 aaPredicted RBP12.85□□□□□ -0.35
SRGAP2D-201ENST00000605551 TRIM37O94972 964 aa12.85□□□□□ -0.35
SRGAP2D-201ENST00000605551 LARP1Q6PKG0 1096 aaKnown RBP12.85□□□□□ -0.35
SRGAP2D-201ENST00000605551 KCNH5Q8NCM2 988 aa12.85□□□□□ -0.35
SRGAP2D-201ENST00000605551 COL5A2P05997 1499 aaPredicted RBP12.85□□□□□ -0.35
SRGAP2D-201ENST00000605551 SLIT3O75094 1523 aa12.84□□□□□ -0.35
SRGAP2D-201ENST00000605551 APBA3O96018 575 aa12.84□□□□□ -0.35
SRGAP2D-201ENST00000605551 SIN3AQ96ST3 1273 aa12.84□□□□□ -0.35
SRGAP2D-201ENST00000605551 TTC21AQ8NDW8 1320 aa12.84□□□□□ -0.35
SRGAP2D-201ENST00000605551 AATKQ6ZMQ8 1374 aa12.83□□□□□ -0.36
SRGAP2D-201ENST00000605551 PARP4Q9UKK3 1724 aaKnown RBP12.83□□□□□ -0.36
SRGAP2D-201ENST00000605551 NBPF14Q5TI25 921 aa12.83□□□□□ -0.36
SRGAP2D-201ENST00000605551 TOM1L2Q6ZVM7 507 aa12.83□□□□□ -0.36
SRGAP2D-201ENST00000605551 TONSLQ96HA7 1378 aa12.82□□□□□ -0.36
SRGAP2D-201ENST00000605551 AKAP12Q02952 1782 aa12.82□□□□□ -0.36
SRGAP2D-201ENST00000605551 OVOS2A0A0G2JMS6 1433 aa12.82□□□□□ -0.36
SRGAP2D-201ENST00000605551 OVOS2A0A0J9YW53 1432 aa12.82□□□□□ -0.36
SRGAP2D-201ENST00000605551 OVOS2Q6IE36 1432 aa12.82□□□□□ -0.36
SRGAP2D-201ENST00000605551 CSB-PGBD3P0DP91 1061 aa12.82□□□□□ -0.36
SRGAP2D-201ENST00000605551 CDCA7Q9BWT1 371 aaPredicted RBP12.82□□□□□ -0.36
SRGAP2D-201ENST00000605551 PIK3C2AO00443 1686 aa12.82□□□□□ -0.36
SRGAP2D-201ENST00000605551 KTN1Q86UP2 1357 aaKnown RBP12.81□□□□□ -0.36
SRGAP2D-201ENST00000605551 CPSF1Q10570 1443 aaKnown RBP12.81□□□□□ -0.36
SRGAP2D-201ENST00000605551 R3HDM1Q15032 1099 aaKnown RBP12.81□□□□□ -0.36
SRGAP2D-201ENST00000605551 EZH2Q15910 746 aaKnown RBP12.81□□□□□ -0.36
SRGAP2D-201ENST00000605551 CARD11Q9BXL7 1154 aa12.81□□□□□ -0.36
SRGAP2D-201ENST00000605551 SBNO2Q9Y2G9 1366 aa12.81□□□□□ -0.36
SRGAP2D-201ENST00000605551 DDB1Q16531 1140 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms