RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 NOB1Q9ULX3 412 aaKnown RBP15.45■□□□□ 0.06
CDCA3-212ENST00000604599 KANK1Q14678 1352 aa15.45■□□□□ 0.06
CDCA3-212ENST00000604599 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
CDCA3-212ENST00000604599 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
CDCA3-212ENST00000604599 A0A0U1RQG5 324 aaPredicted RBP15.44■□□□□ 0.06
CDCA3-212ENST00000604599 CHD1LQ86WJ1 897 aa15.44■□□□□ 0.06
CDCA3-212ENST00000604599 ZNF500O60304 480 aaPredicted RBP15.44■□□□□ 0.06
CDCA3-212ENST00000604599 ZBTB40Q9NUA8 1239 aa15.44■□□□□ 0.06
CDCA3-212ENST00000604599 ZNF445P59923 1031 aa15.44■□□□□ 0.06
CDCA3-212ENST00000604599 BMP2KLQ5H9B9 411 aa15.43■□□□□ 0.06
CDCA3-212ENST00000604599 TBC1D9Q6ZT07 1266 aa15.43■□□□□ 0.06
CDCA3-212ENST00000604599 PRIM1P49642 420 aaKnown RBP15.43■□□□□ 0.06
CDCA3-212ENST00000604599 HS1BP3Q53T59 392 aa15.42■□□□□ 0.06
CDCA3-212ENST00000604599 SLC12A5Q9H2X9 1139 aa15.42■□□□□ 0.06
CDCA3-212ENST00000604599 CFAP53Q96M91 514 aa15.42■□□□□ 0.06
CDCA3-212ENST00000604599 ZBTB7CA1YPR0 619 aa15.41■□□□□ 0.06
CDCA3-212ENST00000604599 ANKRD45Q5TZF3 282 aa15.41■□□□□ 0.06
CDCA3-212ENST00000604599 CLEC17AQ6ZS10 378 aa15.41■□□□□ 0.06
CDCA3-212ENST00000604599 PDLIM2Q96JY6 352 aa15.41■□□□□ 0.06
CDCA3-212ENST00000604599 ZHX1Q9UKY1 873 aaPredicted RBP15.41■□□□□ 0.06
CDCA3-212ENST00000604599 PKP1Q13835 747 aa15.41■□□□□ 0.06
CDCA3-212ENST00000604599 RBM27Q9P2N5 1060 aaKnown RBP15.41■□□□□ 0.06
CDCA3-212ENST00000604599 ZKSCAN5Q9Y2L8 839 aa15.41■□□□□ 0.06
CDCA3-212ENST00000604599 CLTCL1P53675 1640 aa15.41■□□□□ 0.06
CDCA3-212ENST00000604599 ZNF518AQ6AHZ1 1483 aa15.4■□□□□ 0.06
CDCA3-212ENST00000604599 SMAP1Q8IYB5 467 aaPredicted RBP15.4■□□□□ 0.06
CDCA3-212ENST00000604599 LMBRD1Q9NUN5 540 aa15.4■□□□□ 0.06
CDCA3-212ENST00000604599 CFAP74Q9C0B2 1584 aa15.4■□□□□ 0.06
CDCA3-212ENST00000604599 TRPM2O94759 1503 aa15.39■□□□□ 0.05
CDCA3-212ENST00000604599 DYNC1I1O14576 645 aa15.39■□□□□ 0.05
CDCA3-212ENST00000604599 CT47B1P0C2W7 299 aaPredicted RBP15.39■□□□□ 0.05
CDCA3-212ENST00000604599 C1orf115Q9H7X2 142 aa15.38■□□□□ 0.05
CDCA3-212ENST00000604599 ADGRF5Q8IZF2 1346 aa15.38■□□□□ 0.05
CDCA3-212ENST00000604599 KIF16BQ96L93 1317 aa15.38■□□□□ 0.05
CDCA3-212ENST00000604599 PTPRTO14522 1441 aa15.37■□□□□ 0.05
CDCA3-212ENST00000604599 PRPF40AO75400 957 aaKnown RBP15.37■□□□□ 0.05
CDCA3-212ENST00000604599 STAC3Q96MF2 364 aa15.37■□□□□ 0.05
CDCA3-212ENST00000604599 SLC24A1O60721 1099 aa15.37■□□□□ 0.05
CDCA3-212ENST00000604599 CSPP1Q1MSJ5 1256 aa15.37■□□□□ 0.05
CDCA3-212ENST00000604599 MTERF4Q7Z6M4 381 aaKnown RBP15.37■□□□□ 0.05
CDCA3-212ENST00000604599 CHAMP1Q96JM3 812 aa15.37■□□□□ 0.05
CDCA3-212ENST00000604599 SASS6Q6UVJ0 657 aa15.36■□□□□ 0.05
CDCA3-212ENST00000604599 U2SURPO15042 1029 aaKnown RBP15.36■□□□□ 0.05
CDCA3-212ENST00000604599 GPT2Q8TD30 523 aa15.36■□□□□ 0.05
CDCA3-212ENST00000604599 ABCA6Q8N139 1617 aa15.36■□□□□ 0.05
CDCA3-212ENST00000604599 NUCB2P80303 420 aa15.35■□□□□ 0.05
CDCA3-212ENST00000604599 RNF214Q8ND24 703 aa15.35■□□□□ 0.05
CDCA3-212ENST00000604599 SYCE3A1L190 88 aa15.35■□□□□ 0.05
CDCA3-212ENST00000604599 JARID2Q92833 1246 aaPredicted RBP15.35■□□□□ 0.05
CDCA3-212ENST00000604599 NOS1P29475 1434 aa15.35■□□□□ 0.05
CDCA3-212ENST00000604599 ERCC6Q03468 1493 aa15.35■□□□□ 0.05
CDCA3-212ENST00000604599 KIAA1210Q9ULL0 1709 aa15.34■□□□□ 0.05
CDCA3-212ENST00000604599 CD109Q6YHK3 1445 aa15.34■□□□□ 0.05
CDCA3-212ENST00000604599 TRIM35Q9UPQ4 493 aa15.34■□□□□ 0.05
CDCA3-212ENST00000604599 ADGRB2O60241 1585 aa15.34■□□□□ 0.05
CDCA3-212ENST00000604599 IPO8O15397 1037 aaKnown RBP15.33■□□□□ 0.05
CDCA3-212ENST00000604599 TMEM63CQ9P1W3 806 aa15.33■□□□□ 0.05
CDCA3-212ENST00000604599 TRAK1Q9UPV9 953 aa15.33■□□□□ 0.05
CDCA3-212ENST00000604599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.33■□□□□ 0.04
CDCA3-212ENST00000604599 ARHGAP31Q2M1Z3 1444 aa15.33■□□□□ 0.04
CDCA3-212ENST00000604599 PPIP5K1Q6PFW1 1433 aa15.33■□□□□ 0.04
CDCA3-212ENST00000604599 CYP2E1P05181 493 aaPredicted RBP15.33■□□□□ 0.04
CDCA3-212ENST00000604599 TMPOP42166 694 aaKnown RBP15.33■□□□□ 0.04
CDCA3-212ENST00000604599 CCDC39Q9UFE4 941 aa15.33■□□□□ 0.04
CDCA3-212ENST00000604599 ABCC11Q96J66 1382 aa15.33■□□□□ 0.04
CDCA3-212ENST00000604599 CDC45O75419 566 aa15.33■□□□□ 0.04
CDCA3-212ENST00000604599 ZGPATQ8N5A5 531 aaKnown RBP15.33■□□□□ 0.04
CDCA3-212ENST00000604599 TSC1Q92574 1164 aa15.32■□□□□ 0.04
CDCA3-212ENST00000604599 NSFL1CQ9UNZ2 370 aaKnown RBP15.32■□□□□ 0.04
CDCA3-212ENST00000604599 PTMAP06454 111 aaKnown RBP15.32■□□□□ 0.04
CDCA3-212ENST00000604599 RABEP1Q15276 862 aa15.32■□□□□ 0.04
CDCA3-212ENST00000604599 FOXD4L5Q5VV16 416 aaPredicted RBP15.32■□□□□ 0.04
CDCA3-212ENST00000604599 FOXD4L4Q8WXT5 416 aaPredicted RBP15.32■□□□□ 0.04
CDCA3-212ENST00000604599 MCM5P33992 734 aa15.31■□□□□ 0.04
CDCA3-212ENST00000604599 LRSAM1Q6UWE0 723 aa15.31■□□□□ 0.04
CDCA3-212ENST00000604599 CCDC94Q9BW85 323 aaPredicted RBP15.31■□□□□ 0.04
CDCA3-212ENST00000604599 MAP3K4Q9Y6R4 1608 aa15.31■□□□□ 0.04
CDCA3-212ENST00000604599 UGGT1Q9NYU2 1555 aa15.31■□□□□ 0.04
CDCA3-212ENST00000604599 DNTTIP2Q5QJE6 756 aaKnown RBP15.31■□□□□ 0.04
CDCA3-212ENST00000604599 MPNDQ8N594 471 aa15.31■□□□□ 0.04
CDCA3-212ENST00000604599 GCC1Q96CN9 775 aa15.31■□□□□ 0.04
CDCA3-212ENST00000604599 ADGRL1O94910 1474 aa15.3■□□□□ 0.04
CDCA3-212ENST00000604599 GSPT1P15170 499 aaKnown RBP15.3■□□□□ 0.04
CDCA3-212ENST00000604599 PLEKHF1Q96S99 279 aa15.29■□□□□ 0.04
CDCA3-212ENST00000604599 SBNO2Q9Y2G9 1366 aa15.28■□□□□ 0.04
CDCA3-212ENST00000604599 DMTNQ08495 405 aa15.28■□□□□ 0.04
CDCA3-212ENST00000604599 NCBP3Q53F19 620 aaKnown RBP15.28■□□□□ 0.04
CDCA3-212ENST00000604599 ZBTB7BO15156 539 aaPredicted RBP15.28■□□□□ 0.04
CDCA3-212ENST00000604599 ZSCAN20P17040 1043 aaPredicted RBP15.28■□□□□ 0.04
CDCA3-212ENST00000604599 KIAA2012Q0VF49 1180 aa15.28■□□□□ 0.04
CDCA3-212ENST00000604599 SIRT2Q8IXJ6 389 aa15.28■□□□□ 0.04
CDCA3-212ENST00000604599 ZDHHC9Q9Y397 364 aa15.28■□□□□ 0.04
CDCA3-212ENST00000604599 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.28■□□□□ 0.04
CDCA3-212ENST00000604599 TRAPPC8Q9Y2L5 1435 aa15.27■□□□□ 0.03
CDCA3-212ENST00000604599 CBX1P83916 185 aa15.26■□□□□ 0.03
CDCA3-212ENST00000604599 MYO3AQ8NEV4 1616 aa15.26■□□□□ 0.03
CDCA3-212ENST00000604599 FAM177BA6PVY3 158 aa15.26■□□□□ 0.03
CDCA3-212ENST00000604599 MYRIPQ8NFW9 859 aa15.26■□□□□ 0.03
CDCA3-212ENST00000604599 MED14O60244 1454 aa15.25■□□□□ 0.03
CDCA3-212ENST00000604599 MYOM2P54296 1465 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms