RNA–Protein interactions for RNA: ENST00000604589.1

RPS28P1-201, Transcript of ribosomal protein S28 pseudogene 1, humanhuman

BASIC

Gene RPS28P1, Length 187 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P1-201ENST00000604589 ACEP12821 1306 aa10.76□□□□□ -0.69
RPS28P1-201ENST00000604589 ABCA3Q99758 1704 aa10.75□□□□□ -0.69
RPS28P1-201ENST00000604589 VPS72Q15906 364 aa10.75□□□□□ -0.69
RPS28P1-201ENST00000604589 NBPF8Q3BBV2 869 aa10.75□□□□□ -0.69
RPS28P1-201ENST00000604589 ATAD2Q6PL18 1390 aa10.75□□□□□ -0.69
RPS28P1-201ENST00000604589 NWD2Q9ULI1 1742 aa10.75□□□□□ -0.69
RPS28P1-201ENST00000604589 PPIP5K1Q6PFW1 1433 aa10.75□□□□□ -0.69
RPS28P1-201ENST00000604589 QRICH2Q9H0J4 1663 aa10.74□□□□□ -0.69
RPS28P1-201ENST00000604589 CABLES1Q8TDN4 633 aa10.74□□□□□ -0.69
RPS28P1-201ENST00000604589 UPF1Q92900 1129 aaKnown RBP eCLIP10.74□□□□□ -0.69
RPS28P1-201ENST00000604589 CLSPNQ9HAW4 1339 aa10.74□□□□□ -0.69
RPS28P1-201ENST00000604589 SLC24A1O60721 1099 aa10.73□□□□□ -0.69
RPS28P1-201ENST00000604589 PAK3O75914 559 aaPredicted RBP10.73□□□□□ -0.69
RPS28P1-201ENST00000604589 PUS7Q96PZ0 661 aaKnown RBP10.72□□□□□ -0.69
RPS28P1-201ENST00000604589 CARD11Q9BXL7 1154 aa10.72□□□□□ -0.69
RPS28P1-201ENST00000604589 CABP2Q9NPB3 220 aa10.72□□□□□ -0.69
RPS28P1-201ENST00000604589 TIMELESSQ9UNS1 1208 aa10.72□□□□□ -0.69
RPS28P1-201ENST00000604589 USP19O94966 1318 aa10.72□□□□□ -0.69
RPS28P1-201ENST00000604589 USP6P35125 1406 aa10.72□□□□□ -0.69
RPS28P1-201ENST00000604589 COL14A1Q05707 1796 aaKnown RBP10.72□□□□□ -0.69
RPS28P1-201ENST00000604589 FAM83GA6ND36 823 aa10.71□□□□□ -0.69
RPS28P1-201ENST00000604589 ONECUT3O60422 494 aaPredicted RBP10.71□□□□□ -0.69
RPS28P1-201ENST00000604589 CPDO75976 1380 aa10.71□□□□□ -0.69
RPS28P1-201ENST00000604589 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.69
RPS28P1-201ENST00000604589 CRYBG1Q9Y4K1 1723 aa10.71□□□□□ -0.69
RPS28P1-201ENST00000604589 PLCH1Q4KWH8 1693 aa10.7□□□□□ -0.7
RPS28P1-201ENST00000604589 GLI3P10071 1580 aa10.7□□□□□ -0.7
RPS28P1-201ENST00000604589 SSH2Q76I76 1423 aa10.7□□□□□ -0.7
RPS28P1-201ENST00000604589 NLRP13Q86W25 1043 aa10.7□□□□□ -0.7
RPS28P1-201ENST00000604589 PRDM11Q9NQV5 511 aa10.7□□□□□ -0.7
RPS28P1-201ENST00000604589 CABP1Q9NZU7 370 aa10.7□□□□□ -0.7
RPS28P1-201ENST00000604589 CCDC125Q86Z20 511 aa10.69□□□□□ -0.7
RPS28P1-201ENST00000604589 ABTB2Q8N961 1025 aa10.69□□□□□ -0.7
RPS28P1-201ENST00000604589 BTG4Q9NY30 223 aa10.69□□□□□ -0.7
RPS28P1-201ENST00000604589 KIAA0232Q92628 1395 aa10.68□□□□□ -0.7
RPS28P1-201ENST00000604589 TTC21AQ8NDW8 1320 aa10.68□□□□□ -0.7
RPS28P1-201ENST00000604589 NRAPQ86VF7 1730 aa10.68□□□□□ -0.7
RPS28P1-201ENST00000604589 PHRF1Q9P1Y6 1649 aaKnown RBP10.68□□□□□ -0.7
RPS28P1-201ENST00000604589 NRKQ7Z2Y5 1582 aa10.68□□□□□ -0.7
RPS28P1-201ENST00000604589 CPSF1Q10570 1443 aaKnown RBP10.67□□□□□ -0.7
RPS28P1-201ENST00000604589 NINLQ9Y2I6 1382 aa10.67□□□□□ -0.7
RPS28P1-201ENST00000604589 SPATA31A5Q5VU36 1347 aa10.67□□□□□ -0.7
RPS28P1-201ENST00000604589 SPATA31A7Q8IWB4 1347 aa10.67□□□□□ -0.7
RPS28P1-201ENST00000604589 GCP02774 474 aa10.66□□□□□ -0.7
RPS28P1-201ENST00000604589 SEPT12Q8IYM1 358 aa10.66□□□□□ -0.7
RPS28P1-201ENST00000604589 CCDC9Q9Y3X0 531 aaKnown RBP10.66□□□□□ -0.7
RPS28P1-201ENST00000604589 SLIT3O75094 1523 aa10.66□□□□□ -0.7
RPS28P1-201ENST00000604589 PLEKHG5O94827 1062 aa10.65□□□□□ -0.7
RPS28P1-201ENST00000604589 TTC21BQ7Z4L5 1316 aa10.64□□□□□ -0.71
RPS28P1-201ENST00000604589 NLRP6P59044 892 aa10.64□□□□□ -0.71
RPS28P1-201ENST00000604589 KCNH5Q8NCM2 988 aa10.64□□□□□ -0.71
RPS28P1-201ENST00000604589 BLMP54132 1417 aaPredicted RBP10.64□□□□□ -0.71
RPS28P1-201ENST00000604589 AATKQ6ZMQ8 1374 aa10.64□□□□□ -0.71
RPS28P1-201ENST00000604589 KTN1Q86UP2 1357 aaKnown RBP10.64□□□□□ -0.71
RPS28P1-201ENST00000604589 SPATA31A1Q5TZJ5 1347 aa10.63□□□□□ -0.71
RPS28P1-201ENST00000604589 ZC3H6P61129 1189 aaKnown RBP10.63□□□□□ -0.71
RPS28P1-201ENST00000604589 NUTM2GQ5VZR2 741 aa10.63□□□□□ -0.71
RPS28P1-201ENST00000604589 KRT27Q7Z3Y8 459 aa10.63□□□□□ -0.71
RPS28P1-201ENST00000604589 TESK2Q96S53 571 aa10.63□□□□□ -0.71
RPS28P1-201ENST00000604589 USP31Q70CQ4 1352 aa10.63□□□□□ -0.71
RPS28P1-201ENST00000604589 ABCC6O95255 1503 aa10.63□□□□□ -0.71
RPS28P1-201ENST00000604589 LMO7Q8WWI1 1683 aa10.63□□□□□ -0.71
RPS28P1-201ENST00000604589 EDC4Q6P2E9 1401 aaKnown RBP10.62□□□□□ -0.71
RPS28P1-201ENST00000604589 CHRNA2Q15822 529 aa10.62□□□□□ -0.71
RPS28P1-201ENST00000604589 FAM98CQ17RN3 349 aaKnown RBP10.62□□□□□ -0.71
RPS28P1-201ENST00000604589 BARGINQ6ZT62 677 aa10.62□□□□□ -0.71
RPS28P1-201ENST00000604589 HDGFL2Q7Z4V5 671 aaPredicted RBP10.62□□□□□ -0.71
RPS28P1-201ENST00000604589 TERF2IPQ9NYB0 399 aa10.62□□□□□ -0.71
RPS28P1-201ENST00000604589 THRAP3Q9Y2W1 955 aaKnown RBP10.62□□□□□ -0.71
RPS28P1-201ENST00000604589 PIK3C2AO00443 1686 aa10.62□□□□□ -0.71
RPS28P1-201ENST00000604589 THSD7AQ9UPZ6 1657 aa10.62□□□□□ -0.71
RPS28P1-201ENST00000604589 AKAP12Q02952 1782 aa10.62□□□□□ -0.71
RPS28P1-201ENST00000604589 CD163L1Q9NR16 1453 aa10.61□□□□□ -0.71
RPS28P1-201ENST00000604589 CAMTA1Q9Y6Y1 1673 aa10.61□□□□□ -0.71
RPS28P1-201ENST00000604589 ST20-MTHFSA0A0A6YYL1 179 aa10.61□□□□□ -0.71
RPS28P1-201ENST00000604589 USP47Q96K76 1375 aa10.61□□□□□ -0.71
RPS28P1-201ENST00000604589 COL5A2P05997 1499 aaPredicted RBP10.61□□□□□ -0.71
RPS28P1-201ENST00000604589 EVA1CP58658 441 aa10.6□□□□□ -0.71
RPS28P1-201ENST00000604589 CDCA8Q53HL2 280 aa10.6□□□□□ -0.71
RPS28P1-201ENST00000604589 MON2Q7Z3U7 1717 aa10.6□□□□□ -0.71
RPS28P1-201ENST00000604589 USP54Q70EL1 1684 aa10.6□□□□□ -0.71
RPS28P1-201ENST00000604589 CRB1P82279 1406 aa10.59□□□□□ -0.71
RPS28P1-201ENST00000604589 A0A0G2JS52 829 aa10.59□□□□□ -0.71
RPS28P1-201ENST00000604589 C11orf95C9JLR9 678 aaPredicted RBP10.59□□□□□ -0.71
RPS28P1-201ENST00000604589 TMF1P82094 1093 aa10.59□□□□□ -0.71
RPS28P1-201ENST00000604589 MYT1Q01538 1121 aa10.59□□□□□ -0.71
RPS28P1-201ENST00000604589 SF3B2Q13435 895 aaKnown RBP10.59□□□□□ -0.71
RPS28P1-201ENST00000604589 ARHGEF25Q86VW2 580 aa10.59□□□□□ -0.71
RPS28P1-201ENST00000604589 TCP11L2Q8N4U5 519 aa10.59□□□□□ -0.71
RPS28P1-201ENST00000604589 TMC1Q8TDI8 760 aa10.59□□□□□ -0.71
RPS28P1-201ENST00000604589 STRN4Q9NRL3 753 aa10.59□□□□□ -0.71
RPS28P1-201ENST00000604589 NFAT5O94916 1531 aa10.58□□□□□ -0.72
RPS28P1-201ENST00000604589 A0A1W2PP64 1363 aa10.58□□□□□ -0.72
RPS28P1-201ENST00000604589 SLC12A5Q9H2X9 1139 aa10.58□□□□□ -0.72
RPS28P1-201ENST00000604589 ANKRD36BQ8N2N9 1353 aa10.57□□□□□ -0.72
RPS28P1-201ENST00000604589 LARP1Q6PKG0 1096 aaKnown RBP10.57□□□□□ -0.72
RPS28P1-201ENST00000604589 CDCA7Q9BWT1 371 aaPredicted RBP10.57□□□□□ -0.72
RPS28P1-201ENST00000604589 PCGF6Q9BYE7 350 aa10.57□□□□□ -0.72
RPS28P1-201ENST00000604589 OVOS2A0A0J9YW53 1432 aa10.57□□□□□ -0.72
RPS28P1-201ENST00000604589 DISP2A7MBM2 1401 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms