RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 CABP2Q9NPB3 220 aa23.47■■□□□ 1.35
TUBE1-206ENST00000603722 FAM83GA6ND36 823 aa23.46■■□□□ 1.35
TUBE1-206ENST00000603722 ATAD2Q6PL18 1390 aa23.46■■□□□ 1.35
TUBE1-206ENST00000603722 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.46■■□□□ 1.35
TUBE1-206ENST00000603722 PPIP5K1Q6PFW1 1433 aa23.45■■□□□ 1.34
TUBE1-206ENST00000603722 PLEKHG3A1L390 1219 aa23.45■■□□□ 1.34
TUBE1-206ENST00000603722 NBPF8Q3BBV2 869 aa23.45■■□□□ 1.34
TUBE1-206ENST00000603722 QRICH2Q9H0J4 1663 aa23.44■■□□□ 1.34
TUBE1-206ENST00000603722 GLI3P10071 1580 aa23.44■■□□□ 1.34
TUBE1-206ENST00000603722 VPS72Q15906 364 aa23.43■■□□□ 1.34
TUBE1-206ENST00000603722 CCDC9Q9Y3X0 531 aaKnown RBP23.43■■□□□ 1.34
TUBE1-206ENST00000603722 PLCH1Q4KWH8 1693 aa23.42■■□□□ 1.34
TUBE1-206ENST00000603722 TONSLQ96HA7 1378 aa23.41■■□□□ 1.34
TUBE1-206ENST00000603722 NUTM2GQ5VZR2 741 aa23.41■■□□□ 1.34
TUBE1-206ENST00000603722 BTG4Q9NY30 223 aa23.4■■□□□ 1.34
TUBE1-206ENST00000603722 NWD2Q9ULI1 1742 aa23.39■■□□□ 1.33
TUBE1-206ENST00000603722 EVC2Q86UK5 1308 aa23.38■■□□□ 1.33
TUBE1-206ENST00000603722 PRDM11Q9NQV5 511 aa23.38■■□□□ 1.33
TUBE1-206ENST00000603722 CRYBG1Q9Y4K1 1723 aa23.37■■□□□ 1.33
TUBE1-206ENST00000603722 CABP1Q9NZU7 370 aa23.37■■□□□ 1.33
TUBE1-206ENST00000603722 KIAA0232Q92628 1395 aa23.37■■□□□ 1.33
TUBE1-206ENST00000603722 COL14A1Q05707 1796 aaKnown RBP23.35■■□□□ 1.33
TUBE1-206ENST00000603722 SEPT12Q8IYM1 358 aa23.35■■□□□ 1.33
TUBE1-206ENST00000603722 ABTB2Q8N961 1025 aa23.35■■□□□ 1.33
TUBE1-206ENST00000603722 CARD11Q9BXL7 1154 aa23.35■■□□□ 1.33
TUBE1-206ENST00000603722 NRAPQ86VF7 1730 aa23.33■■□□□ 1.33
TUBE1-206ENST00000603722 ZC3H6P61129 1189 aaKnown RBP23.33■■□□□ 1.33
TUBE1-206ENST00000603722 CHRNA2Q15822 529 aa23.33■■□□□ 1.33
TUBE1-206ENST00000603722 PHRF1Q9P1Y6 1649 aaKnown RBP23.33■■□□□ 1.32
TUBE1-206ENST00000603722 USP6P35125 1406 aa23.32■■□□□ 1.32
TUBE1-206ENST00000603722 EP400Q96L91 3159 aa23.31■■□□□ 1.32
TUBE1-206ENST00000603722 USP19O94966 1318 aa23.31■■□□□ 1.32
TUBE1-206ENST00000603722 BRD4O60885 1362 aaPredicted RBP23.3■■□□□ 1.32
TUBE1-206ENST00000603722 A0A0G2JS52 829 aa23.3■■□□□ 1.32
TUBE1-206ENST00000603722 MYT1Q01538 1121 aa23.3■■□□□ 1.32
TUBE1-206ENST00000603722 FAM98CQ17RN3 349 aaKnown RBP23.3■■□□□ 1.32
TUBE1-206ENST00000603722 NRKQ7Z2Y5 1582 aa23.3■■□□□ 1.32
TUBE1-206ENST00000603722 ONECUT3O60422 494 aaPredicted RBP23.29■■□□□ 1.32
TUBE1-206ENST00000603722 NLRP13Q86W25 1043 aa23.28■■□□□ 1.32
TUBE1-206ENST00000603722 SPATA31A5Q5VU36 1347 aa23.28■■□□□ 1.32
TUBE1-206ENST00000603722 SPATA31A7Q8IWB4 1347 aa23.28■■□□□ 1.32
TUBE1-206ENST00000603722 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.31
TUBE1-206ENST00000603722 STRN4Q9NRL3 753 aa23.26■■□□□ 1.31
TUBE1-206ENST00000603722 SSH2Q76I76 1423 aa23.25■■□□□ 1.31
TUBE1-206ENST00000603722 GCP02774 474 aa23.25■■□□□ 1.31
TUBE1-206ENST00000603722 KRT27Q7Z3Y8 459 aa23.25■■□□□ 1.31
TUBE1-206ENST00000603722 CPDO75976 1380 aa23.25■■□□□ 1.31
TUBE1-206ENST00000603722 NLRP6P59044 892 aa23.24■■□□□ 1.31
TUBE1-206ENST00000603722 CCDC125Q86Z20 511 aa23.23■■□□□ 1.31
TUBE1-206ENST00000603722 ZNF692Q9BU19 519 aaPredicted RBP23.21■■□□□ 1.31
TUBE1-206ENST00000603722 SPATA31A1Q5TZJ5 1347 aa23.21■■□□□ 1.31
TUBE1-206ENST00000603722 BLMP54132 1417 aaPredicted RBP23.21■■□□□ 1.31
TUBE1-206ENST00000603722 TTC21BQ7Z4L5 1316 aa23.2■■□□□ 1.3
TUBE1-206ENST00000603722 EVA1CP58658 441 aa23.2■■□□□ 1.3
TUBE1-206ENST00000603722 SLIT3O75094 1523 aa23.19■■□□□ 1.3
TUBE1-206ENST00000603722 CPSF1Q10570 1443 aaKnown RBP23.19■■□□□ 1.3
TUBE1-206ENST00000603722 ZBTB7CA1YPR0 619 aa23.19■■□□□ 1.3
TUBE1-206ENST00000603722 CAMTA1Q9Y6Y1 1673 aa23.19■■□□□ 1.3
TUBE1-206ENST00000603722 KTN1Q86UP2 1357 aaKnown RBP23.18■■□□□ 1.3
TUBE1-206ENST00000603722 USP35Q9P2H5 1018 aa23.18■■□□□ 1.3
TUBE1-206ENST00000603722 PIK3C2AO00443 1686 aa23.18■■□□□ 1.3
TUBE1-206ENST00000603722 BRWD3Q6RI45 1802 aa23.17■■□□□ 1.3
TUBE1-206ENST00000603722 LARP1Q6PKG0 1096 aaKnown RBP23.17■■□□□ 1.3
TUBE1-206ENST00000603722 LMO7Q8WWI1 1683 aa23.16■■□□□ 1.3
TUBE1-206ENST00000603722 THSD7AQ9UPZ6 1657 aa23.16■■□□□ 1.3
TUBE1-206ENST00000603722 TTC21AQ8NDW8 1320 aa23.15■■□□□ 1.3
TUBE1-206ENST00000603722 SF3B2Q13435 895 aaKnown RBP23.15■■□□□ 1.3
TUBE1-206ENST00000603722 TMC1Q8TDI8 760 aa23.15■■□□□ 1.3
TUBE1-206ENST00000603722 COL5A2P05997 1499 aaPredicted RBP23.14■■□□□ 1.29
TUBE1-206ENST00000603722 ST20-MTHFSA0A0A6YYL1 179 aa23.13■■□□□ 1.29
TUBE1-206ENST00000603722 SOX12O15370 315 aa23.13■■□□□ 1.29
TUBE1-206ENST00000603722 FAM182BQ5T319 152 aa23.13■■□□□ 1.29
TUBE1-206ENST00000603722 DEFB132Q7Z7B7 95 aa23.13■■□□□ 1.29
TUBE1-206ENST00000603722 CD163L1Q9NR16 1453 aa23.12■■□□□ 1.29
TUBE1-206ENST00000603722 AATKQ6ZMQ8 1374 aa23.12■■□□□ 1.29
TUBE1-206ENST00000603722 AKAP12Q02952 1782 aa23.12■■□□□ 1.29
TUBE1-206ENST00000603722 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.11■■□□□ 1.29
TUBE1-206ENST00000603722 TESK2Q96S53 571 aa23.11■■□□□ 1.29
TUBE1-206ENST00000603722 PCGF6Q9BYE7 350 aa23.11■■□□□ 1.29
TUBE1-206ENST00000603722 BARGINQ6ZT62 677 aa23.1■■□□□ 1.29
TUBE1-206ENST00000603722 HDGFL2Q7Z4V5 671 aaPredicted RBP23.1■■□□□ 1.29
TUBE1-206ENST00000603722 TCP11L2Q8N4U5 519 aa23.1■■□□□ 1.29
TUBE1-206ENST00000603722 KCNH5Q8NCM2 988 aa23.1■■□□□ 1.29
TUBE1-206ENST00000603722 SLC12A5Q9H2X9 1139 aa23.1■■□□□ 1.29
TUBE1-206ENST00000603722 ZRANB1Q9UGI0 708 aa23.08■■□□□ 1.29
TUBE1-206ENST00000603722 CRB1P82279 1406 aa23.08■■□□□ 1.28
TUBE1-206ENST00000603722 A0A1W2PP64 1363 aa23.07■■□□□ 1.28
TUBE1-206ENST00000603722 ARHGEF25Q86VW2 580 aa23.07■■□□□ 1.28
TUBE1-206ENST00000603722 PUS7Q96PZ0 661 aaKnown RBP23.07■■□□□ 1.28
TUBE1-206ENST00000603722 MON2Q7Z3U7 1717 aa23.07■■□□□ 1.28
TUBE1-206ENST00000603722 USP47Q96K76 1375 aa23.06■■□□□ 1.28
TUBE1-206ENST00000603722 NME9Q86XW9 330 aa23.06■■□□□ 1.28
TUBE1-206ENST00000603722 AXIN2Q9Y2T1 843 aa23.06■■□□□ 1.28
TUBE1-206ENST00000603722 THRAP3Q9Y2W1 955 aaKnown RBP23.06■■□□□ 1.28
TUBE1-206ENST00000603722 NFAT5O94916 1531 aa23.05■■□□□ 1.28
TUBE1-206ENST00000603722 TERF2IPQ9NYB0 399 aa23.05■■□□□ 1.28
TUBE1-206ENST00000603722 EDC4Q6P2E9 1401 aaKnown RBP23.05■■□□□ 1.28
TUBE1-206ENST00000603722 USP31Q70CQ4 1352 aa23.04■■□□□ 1.28
TUBE1-206ENST00000603722 BAG6P46379 1132 aa23.04■■□□□ 1.28
TUBE1-206ENST00000603722 PDE3BQ13370 1112 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms