RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 PPIP5K1Q6PFW1 1433 aa33.66■■■□□ 2.98
SSX2IP-209ENST00000603677 TRPC5Q9UL62 973 aaPredicted RBP33.66■■■□□ 2.98
SSX2IP-209ENST00000603677 CABP2Q9NPB3 220 aa33.65■■■□□ 2.98
SSX2IP-209ENST00000603677 ATAD2Q6PL18 1390 aa33.62■■■□□ 2.97
SSX2IP-209ENST00000603677 PUS7Q96PZ0 661 aaKnown RBP33.62■■■□□ 2.97
SSX2IP-209ENST00000603677 PAK3O75914 559 aaPredicted RBP33.61■■■□□ 2.97
SSX2IP-209ENST00000603677 ABCA3Q99758 1704 aa33.61■■■□□ 2.97
SSX2IP-209ENST00000603677 SLIT2O94813 1529 aa33.6■■■□□ 2.97
SSX2IP-209ENST00000603677 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.6■■■□□ 2.97
SSX2IP-209ENST00000603677 BCL9LQ86UU0 1499 aa33.59■■■□□ 2.97
SSX2IP-209ENST00000603677 ZNF692Q9BU19 519 aaPredicted RBP33.59■■■□□ 2.97
SSX2IP-209ENST00000603677 ATRNO75882 1429 aa33.58■■■□□ 2.97
SSX2IP-209ENST00000603677 CABP1Q9NZU7 370 aa33.57■■■□□ 2.96
SSX2IP-209ENST00000603677 UNC5CLQ8IV45 518 aa33.56■■■□□ 2.96
SSX2IP-209ENST00000603677 CABLES1Q8TDN4 633 aa33.56■■■□□ 2.96
SSX2IP-209ENST00000603677 NWD2Q9ULI1 1742 aa33.56■■■□□ 2.96
SSX2IP-209ENST00000603677 CRYBG1Q9Y4K1 1723 aa33.52■■■□□ 2.96
SSX2IP-209ENST00000603677 USP6P35125 1406 aa33.51■■■□□ 2.95
SSX2IP-209ENST00000603677 ABTB2Q8N961 1025 aa33.5■■■□□ 2.95
SSX2IP-209ENST00000603677 NLRP13Q86W25 1043 aa33.49■■■□□ 2.95
SSX2IP-209ENST00000603677 CCER1Q8TC90 406 aaPredicted RBP33.49■■■□□ 2.95
SSX2IP-209ENST00000603677 GJD4Q96KN9 370 aaPredicted RBP33.47■■■□□ 2.95
SSX2IP-209ENST00000603677 COL14A1Q05707 1796 aaKnown RBP33.47■■■□□ 2.95
SSX2IP-209ENST00000603677 FAM83GA6ND36 823 aa33.46■■■□□ 2.95
SSX2IP-209ENST00000603677 SSH2Q76I76 1423 aa33.45■■■□□ 2.95
SSX2IP-209ENST00000603677 PLCH1Q4KWH8 1693 aa33.45■■■□□ 2.94
SSX2IP-209ENST00000603677 CPSF1Q10570 1443 aaKnown RBP33.45■■■□□ 2.94
SSX2IP-209ENST00000603677 ST20-MTHFSA0A0A6YYL1 179 aa33.43■■■□□ 2.94
SSX2IP-209ENST00000603677 VPS72Q15906 364 aa33.43■■■□□ 2.94
SSX2IP-209ENST00000603677 TESK2Q96S53 571 aa33.43■■■□□ 2.94
SSX2IP-209ENST00000603677 USP19O94966 1318 aa33.43■■■□□ 2.94
SSX2IP-209ENST00000603677 AKAP12Q02952 1782 aa33.42■■■□□ 2.94
SSX2IP-209ENST00000603677 TTC21AQ8NDW8 1320 aa33.42■■■□□ 2.94
SSX2IP-209ENST00000603677 NINLQ9Y2I6 1382 aa33.42■■■□□ 2.94
SSX2IP-209ENST00000603677 RGS12O14924 1447 aa33.42■■■□□ 2.94
SSX2IP-209ENST00000603677 PHRF1Q9P1Y6 1649 aaKnown RBP33.42■■■□□ 2.94
SSX2IP-209ENST00000603677 PRDM11Q9NQV5 511 aa33.39■■■□□ 2.94
SSX2IP-209ENST00000603677 CPDO75976 1380 aa33.38■■■□□ 2.93
SSX2IP-209ENST00000603677 USP47Q96K76 1375 aa33.38■■■□□ 2.93
SSX2IP-209ENST00000603677 PLEKHG5O94827 1062 aa33.37■■■□□ 2.93
SSX2IP-209ENST00000603677 BTG4Q9NY30 223 aa33.36■■■□□ 2.93
SSX2IP-209ENST00000603677 KTN1Q86UP2 1357 aaKnown RBP33.35■■■□□ 2.93
SSX2IP-209ENST00000603677 TTC21BQ7Z4L5 1316 aa33.34■■■□□ 2.93
SSX2IP-209ENST00000603677 GCP02774 474 aa33.34■■■□□ 2.93
SSX2IP-209ENST00000603677 CDCA8Q53HL2 280 aa33.34■■■□□ 2.93
SSX2IP-209ENST00000603677 HDGFL2Q7Z4V5 671 aaPredicted RBP33.34■■■□□ 2.93
SSX2IP-209ENST00000603677 TERF2IPQ9NYB0 399 aa33.34■■■□□ 2.93
SSX2IP-209ENST00000603677 KIAA0232Q92628 1395 aa33.34■■■□□ 2.93
SSX2IP-209ENST00000603677 NRAPQ86VF7 1730 aa33.33■■■□□ 2.93
SSX2IP-209ENST00000603677 ONECUT3O60422 494 aaPredicted RBP33.33■■■□□ 2.93
SSX2IP-209ENST00000603677 NLRP6P59044 892 aa33.33■■■□□ 2.93
SSX2IP-209ENST00000603677 TMF1P82094 1093 aa33.33■■■□□ 2.93
SSX2IP-209ENST00000603677 NUTM2GQ5VZR2 741 aa33.33■■■□□ 2.93
SSX2IP-209ENST00000603677 NRKQ7Z2Y5 1582 aa33.32■■■□□ 2.92
SSX2IP-209ENST00000603677 MON2Q7Z3U7 1717 aa33.32■■■□□ 2.92
SSX2IP-209ENST00000603677 GLI3P10071 1580 aa33.3■■■□□ 2.92
SSX2IP-209ENST00000603677 SLIT3O75094 1523 aa33.3■■■□□ 2.92
SSX2IP-209ENST00000603677 KCNH5Q8NCM2 988 aa33.29■■■□□ 2.92
SSX2IP-209ENST00000603677 TMC1Q8TDI8 760 aa33.29■■■□□ 2.92
SSX2IP-209ENST00000603677 PIK3C2AO00443 1686 aa33.28■■■□□ 2.92
SSX2IP-209ENST00000603677 CD163L1Q9NR16 1453 aa33.27■■■□□ 2.92
SSX2IP-209ENST00000603677 ZC3H6P61129 1189 aaKnown RBP33.27■■■□□ 2.92
SSX2IP-209ENST00000603677 UPF1Q92900 1129 aaKnown RBP eCLIP33.26■■■□□ 2.91
SSX2IP-209ENST00000603677 SLC12A5Q9H2X9 1139 aa33.26■■■□□ 2.91
SSX2IP-209ENST00000603677 CCDC9Q9Y3X0 531 aaKnown RBP33.25■■■□□ 2.91
SSX2IP-209ENST00000603677 EDC4Q6P2E9 1401 aaKnown RBP33.25■■■□□ 2.91
SSX2IP-209ENST00000603677 USP31Q70CQ4 1352 aa33.23■■■□□ 2.91
SSX2IP-209ENST00000603677 SPATA31A5Q5VU36 1347 aa33.23■■■□□ 2.91
SSX2IP-209ENST00000603677 SPATA31A7Q8IWB4 1347 aa33.23■■■□□ 2.91
SSX2IP-209ENST00000603677 USP54Q70EL1 1684 aa33.21■■■□□ 2.91
SSX2IP-209ENST00000603677 AATKQ6ZMQ8 1374 aa33.21■■■□□ 2.91
SSX2IP-209ENST00000603677 LMO7Q8WWI1 1683 aa33.2■■■□□ 2.9
SSX2IP-209ENST00000603677 CHRNA2Q15822 529 aa33.19■■■□□ 2.9
SSX2IP-209ENST00000603677 A0A1W2PP64 1363 aa33.19■■■□□ 2.9
SSX2IP-209ENST00000603677 EVA1CP58658 441 aa33.17■■■□□ 2.9
SSX2IP-209ENST00000603677 CCDC125Q86Z20 511 aa33.17■■■□□ 2.9
SSX2IP-209ENST00000603677 SEPT12Q8IYM1 358 aa33.16■■■□□ 2.9
SSX2IP-209ENST00000603677 ANKRD36BQ8N2N9 1353 aa33.16■■■□□ 2.9
SSX2IP-209ENST00000603677 SPATA31A1Q5TZJ5 1347 aa33.15■■■□□ 2.9
SSX2IP-209ENST00000603677 CAMTA1Q9Y6Y1 1673 aa33.15■■■□□ 2.9
SSX2IP-209ENST00000603677 ABCC6O95255 1503 aa33.13■■■□□ 2.89
SSX2IP-209ENST00000603677 EIF4G2P78344 907 aaKnown RBP eCLIP33.13■■■□□ 2.89
SSX2IP-209ENST00000603677 ARHGEF25Q86VW2 580 aa33.13■■■□□ 2.89
SSX2IP-209ENST00000603677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.12■■■□□ 2.89
SSX2IP-209ENST00000603677 THRAP3Q9Y2W1 955 aaKnown RBP33.12■■■□□ 2.89
SSX2IP-209ENST00000603677 BARGINQ6ZT62 677 aa33.1■■■□□ 2.89
SSX2IP-209ENST00000603677 FAM98CQ17RN3 349 aaKnown RBP33.09■■■□□ 2.89
SSX2IP-209ENST00000603677 STRN4Q9NRL3 753 aa33.09■■■□□ 2.89
SSX2IP-209ENST00000603677 COL5A2P05997 1499 aaPredicted RBP33.08■■■□□ 2.89
SSX2IP-209ENST00000603677 BRWD3Q6RI45 1802 aa33.08■■■□□ 2.89
SSX2IP-209ENST00000603677 NFAT5O94916 1531 aa33.07■■■□□ 2.89
SSX2IP-209ENST00000603677 COL18A1P39060 1754 aa33.07■■■□□ 2.88
SSX2IP-209ENST00000603677 KRT27Q7Z3Y8 459 aa33.07■■■□□ 2.88
SSX2IP-209ENST00000603677 NME9Q86XW9 330 aa33.06■■■□□ 2.88
SSX2IP-209ENST00000603677 THSD7AQ9UPZ6 1657 aa33.05■■■□□ 2.88
SSX2IP-209ENST00000603677 OVOS2A0A0J9YW53 1432 aa33.03■■■□□ 2.88
SSX2IP-209ENST00000603677 CRB1P82279 1406 aa33.03■■■□□ 2.88
SSX2IP-209ENST00000603677 OVOS2Q6IE36 1432 aa33.03■■■□□ 2.88
SSX2IP-209ENST00000603677 TCP11L2Q8N4U5 519 aa33.03■■■□□ 2.88
SSX2IP-209ENST00000603677 LARP1Q6PKG0 1096 aaKnown RBP33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms