RNA–Protein interactions for RNA: ENST00000603055.1

NLRC3-203, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5

Gene NLRC3, Length 1,158 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-203ENST00000603055 NRAPQ86VF7 1730 aa26.16■■□□□ 1.78
NLRC3-203ENST00000603055 CENPJQ9HC77 1338 aaPredicted RBP26.15■■□□□ 1.78
NLRC3-203ENST00000603055 CCDC61Q9Y6R9 512 aa26.15■■□□□ 1.78
NLRC3-203ENST00000603055 COL14A1Q05707 1796 aaKnown RBP26.15■■□□□ 1.78
NLRC3-203ENST00000603055 ACEP12821 1306 aa26.14■■□□□ 1.77
NLRC3-203ENST00000603055 QRICH2Q9H0J4 1663 aa26.12■■□□□ 1.77
NLRC3-203ENST00000603055 BRWD3Q6RI45 1802 aa26.12■■□□□ 1.77
NLRC3-203ENST00000603055 PLEKHG3A1L390 1219 aa26.12■■□□□ 1.77
NLRC3-203ENST00000603055 BTG4Q9NY30 223 aa26.12■■□□□ 1.77
NLRC3-203ENST00000603055 CCDC9Q9Y3X0 531 aaKnown RBP26.12■■□□□ 1.77
NLRC3-203ENST00000603055 TRPM1Q7Z4N2 1603 aa26.12■■□□□ 1.77
NLRC3-203ENST00000603055 NEUROD1Q13562 356 aa26.11■■□□□ 1.77
NLRC3-203ENST00000603055 NBPF8Q3BBV2 869 aa26.11■■□□□ 1.77
NLRC3-203ENST00000603055 SEPT12Q8IYM1 358 aa26.11■■□□□ 1.77
NLRC3-203ENST00000603055 ONECUT3O60422 494 aaPredicted RBP26.1■■□□□ 1.77
NLRC3-203ENST00000603055 PHRF1Q9P1Y6 1649 aaKnown RBP26.1■■□□□ 1.77
NLRC3-203ENST00000603055 SRPK2P78362 688 aaKnown RBP26.09■■□□□ 1.77
NLRC3-203ENST00000603055 EP400Q96L91 3159 aa26.08■■□□□ 1.77
NLRC3-203ENST00000603055 CABP2Q9NPB3 220 aa26.07■■□□□ 1.76
NLRC3-203ENST00000603055 PPIP5K1Q6PFW1 1433 aa26.06■■□□□ 1.76
NLRC3-203ENST00000603055 NUTM2GQ5VZR2 741 aa26.06■■□□□ 1.76
NLRC3-203ENST00000603055 PRDM11Q9NQV5 511 aa26.06■■□□□ 1.76
NLRC3-203ENST00000603055 CCDC125Q86Z20 511 aa26.05■■□□□ 1.76
NLRC3-203ENST00000603055 KIAA0232Q92628 1395 aa26.04■■□□□ 1.76
NLRC3-203ENST00000603055 ROCK2O75116 1388 aaKnown RBP26.02■■□□□ 1.76
NLRC3-203ENST00000603055 NRKQ7Z2Y5 1582 aa26■■□□□ 1.75
NLRC3-203ENST00000603055 BLMP54132 1417 aaPredicted RBP26■■□□□ 1.75
NLRC3-203ENST00000603055 SPATA31A5Q5VU36 1347 aa26■■□□□ 1.75
NLRC3-203ENST00000603055 SPATA31A7Q8IWB4 1347 aa26■■□□□ 1.75
NLRC3-203ENST00000603055 FAM98CQ17RN3 349 aaKnown RBP26■■□□□ 1.75
NLRC3-203ENST00000603055 ABTB2Q8N961 1025 aa26■■□□□ 1.75
NLRC3-203ENST00000603055 ZC3H6P61129 1189 aaKnown RBP25.99■■□□□ 1.75
NLRC3-203ENST00000603055 CHRNA2Q15822 529 aa25.99■■□□□ 1.75
NLRC3-203ENST00000603055 KRT27Q7Z3Y8 459 aa25.99■■□□□ 1.75
NLRC3-203ENST00000603055 A0A0G2JS52 829 aa25.98■■□□□ 1.75
NLRC3-203ENST00000603055 MYT1Q01538 1121 aa25.98■■□□□ 1.75
NLRC3-203ENST00000603055 CABP1Q9NZU7 370 aa25.98■■□□□ 1.75
NLRC3-203ENST00000603055 USP19O94966 1318 aa25.97■■□□□ 1.75
NLRC3-203ENST00000603055 EVC2Q86UK5 1308 aa25.96■■□□□ 1.75
NLRC3-203ENST00000603055 BRD4O60885 1362 aaPredicted RBP25.95■■□□□ 1.75
NLRC3-203ENST00000603055 USP6P35125 1406 aa25.95■■□□□ 1.74
NLRC3-203ENST00000603055 THSD7AQ9UPZ6 1657 aa25.94■■□□□ 1.74
NLRC3-203ENST00000603055 NLRP13Q86W25 1043 aa25.93■■□□□ 1.74
NLRC3-203ENST00000603055 CPDO75976 1380 aa25.93■■□□□ 1.74
NLRC3-203ENST00000603055 SPATA31A1Q5TZJ5 1347 aa25.92■■□□□ 1.74
NLRC3-203ENST00000603055 STRN4Q9NRL3 753 aa25.92■■□□□ 1.74
NLRC3-203ENST00000603055 LMO7Q8WWI1 1683 aa25.91■■□□□ 1.74
NLRC3-203ENST00000603055 DEFB132Q7Z7B7 95 aa25.91■■□□□ 1.74
NLRC3-203ENST00000603055 CAMTA1Q9Y6Y1 1673 aa25.9■■□□□ 1.74
NLRC3-203ENST00000603055 SSH2Q76I76 1423 aa25.9■■□□□ 1.74
NLRC3-203ENST00000603055 GCP02774 474 aa25.89■■□□□ 1.74
NLRC3-203ENST00000603055 ZRANB1Q9UGI0 708 aa25.89■■□□□ 1.74
NLRC3-203ENST00000603055 SF3B2Q13435 895 aaKnown RBP25.88■■□□□ 1.73
NLRC3-203ENST00000603055 PIK3C2AO00443 1686 aa25.87■■□□□ 1.73
NLRC3-203ENST00000603055 TONSLQ96HA7 1378 aa25.86■■□□□ 1.73
NLRC3-203ENST00000603055 FAM182BQ5T319 152 aa25.86■■□□□ 1.73
NLRC3-203ENST00000603055 SLIT3O75094 1523 aa25.86■■□□□ 1.73
NLRC3-203ENST00000603055 EVA1CP58658 441 aa25.85■■□□□ 1.73
NLRC3-203ENST00000603055 NLRP6P59044 892 aa25.85■■□□□ 1.73
NLRC3-203ENST00000603055 CARD11Q9BXL7 1154 aa25.85■■□□□ 1.73
NLRC3-203ENST00000603055 AKAP12Q02952 1782 aa25.84■■□□□ 1.73
NLRC3-203ENST00000603055 SBNO2Q9Y2G9 1366 aa25.84■■□□□ 1.73
NLRC3-203ENST00000603055 LARP1Q6PKG0 1096 aaKnown RBP25.83■■□□□ 1.73
NLRC3-203ENST00000603055 USP35Q9P2H5 1018 aa25.83■■□□□ 1.73
NLRC3-203ENST00000603055 TRIM26Q12899 539 aaPredicted RBP25.82■■□□□ 1.72
NLRC3-203ENST00000603055 ZNF692Q9BU19 519 aaPredicted RBP25.82■■□□□ 1.72
NLRC3-203ENST00000603055 CPSF1Q10570 1443 aaKnown RBP25.81■■□□□ 1.72
NLRC3-203ENST00000603055 TTC21BQ7Z4L5 1316 aa25.81■■□□□ 1.72
NLRC3-203ENST00000603055 COL5A2P05997 1499 aaPredicted RBP25.8■■□□□ 1.72
NLRC3-203ENST00000603055 BARGINQ6ZT62 677 aa25.8■■□□□ 1.72
NLRC3-203ENST00000603055 RGPD1P0DJD0 1748 aa25.8■■□□□ 1.72
NLRC3-203ENST00000603055 AATKQ6ZMQ8 1374 aa25.78■■□□□ 1.72
NLRC3-203ENST00000603055 ZBTB7CA1YPR0 619 aa25.77■■□□□ 1.72
NLRC3-203ENST00000603055 BAG6P46379 1132 aa25.77■■□□□ 1.72
NLRC3-203ENST00000603055 TCP11L2Q8N4U5 519 aa25.77■■□□□ 1.72
NLRC3-203ENST00000603055 TTC21AQ8NDW8 1320 aa25.76■■□□□ 1.71
NLRC3-203ENST00000603055 KTN1Q86UP2 1357 aaKnown RBP25.76■■□□□ 1.71
NLRC3-203ENST00000603055 MON2Q7Z3U7 1717 aa25.76■■□□□ 1.71
NLRC3-203ENST00000603055 TNS1Q9HBL0 1735 aaKnown RBP25.76■■□□□ 1.71
NLRC3-203ENST00000603055 COL18A1P39060 1754 aa25.76■■□□□ 1.71
NLRC3-203ENST00000603055 CRB1P82279 1406 aa25.73■■□□□ 1.71
NLRC3-203ENST00000603055 THRAP3Q9Y2W1 955 aaKnown RBP25.73■■□□□ 1.71
NLRC3-203ENST00000603055 CD163L1Q9NR16 1453 aa25.72■■□□□ 1.71
NLRC3-203ENST00000603055 EN1Q05925 392 aaPredicted RBP25.72■■□□□ 1.71
NLRC3-203ENST00000603055 FAM196AQ6ZSG2 479 aa25.72■■□□□ 1.71
NLRC3-203ENST00000603055 DISP2A7MBM2 1401 aa25.71■■□□□ 1.71
NLRC3-203ENST00000603055 PARP4Q9UKK3 1724 aaKnown RBP25.71■■□□□ 1.71
NLRC3-203ENST00000603055 PDE3BQ13370 1112 aa25.7■■□□□ 1.7
NLRC3-203ENST00000603055 ARHGEF25Q86VW2 580 aa25.7■■□□□ 1.7
NLRC3-203ENST00000603055 KCNH5Q8NCM2 988 aa25.7■■□□□ 1.7
NLRC3-203ENST00000603055 AXIN2Q9Y2T1 843 aa25.7■■□□□ 1.7
NLRC3-203ENST00000603055 NFAT5O94916 1531 aa25.69■■□□□ 1.7
NLRC3-203ENST00000603055 SOX12O15370 315 aa25.68■■□□□ 1.7
NLRC3-203ENST00000603055 TRIM37O94972 964 aa25.68■■□□□ 1.7
NLRC3-203ENST00000603055 SRCAPQ6ZRS2 3230 aa25.68■■□□□ 1.7
NLRC3-203ENST00000603055 TMC1Q8TDI8 760 aa25.67■■□□□ 1.7
NLRC3-203ENST00000603055 SLC12A5Q9H2X9 1139 aa25.67■■□□□ 1.7
NLRC3-203ENST00000603055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.66■■□□□ 1.7
NLRC3-203ENST00000603055 USP31Q70CQ4 1352 aa25.66■■□□□ 1.7
NLRC3-203ENST00000603055 WDR17Q8IZU2 1322 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms