RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 FAM43AQ8N2R8 423 aa6.51□□□□□ -1.37
SPTBN1-206ENST00000602898 SLAIN1Q8ND83 568 aa6.51□□□□□ -1.37
SPTBN1-206ENST00000602898 SPOCK3Q9BQ16 436 aa6.51□□□□□ -1.37
SPTBN1-206ENST00000602898 SBNO2Q9Y2G9 1366 aa6.51□□□□□ -1.37
SPTBN1-206ENST00000602898 ADAMTSL3P82987 1691 aa6.51□□□□□ -1.37
SPTBN1-206ENST00000602898 KCNA1Q09470 495 aa6.51□□□□□ -1.37
SPTBN1-206ENST00000602898 NOM1Q5C9Z4 860 aaKnown RBP6.51□□□□□ -1.37
SPTBN1-206ENST00000602898 PRDM4Q9UKN5 801 aa6.51□□□□□ -1.37
SPTBN1-206ENST00000602898 SH3BP5O60239 455 aa6.5□□□□□ -1.37
SPTBN1-206ENST00000602898 CYB5RLQ6IPT4 315 aa6.5□□□□□ -1.37
SPTBN1-206ENST00000602898 RINLQ6ZS11 566 aa6.5□□□□□ -1.37
SPTBN1-206ENST00000602898 MTA3Q9BTC8 594 aa6.5□□□□□ -1.37
SPTBN1-206ENST00000602898 TMX4Q9H1E5 349 aaPredicted RBP6.5□□□□□ -1.37
SPTBN1-206ENST00000602898 SNAPC4Q5SXM2 1469 aa6.5□□□□□ -1.37
SPTBN1-206ENST00000602898 MORC4Q8TE76 937 aa6.5□□□□□ -1.37
SPTBN1-206ENST00000602898 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.5□□□□□ -1.37
SPTBN1-206ENST00000602898 CENPJQ9HC77 1338 aaPredicted RBP6.5□□□□□ -1.37
SPTBN1-206ENST00000602898 NAALADL2Q58DX5 795 aa6.49□□□□□ -1.37
SPTBN1-206ENST00000602898 ZNF330Q9Y3S2 320 aaPredicted RBP6.49□□□□□ -1.37
SPTBN1-206ENST00000602898 LONRF3Q496Y0 759 aa6.49□□□□□ -1.37
SPTBN1-206ENST00000602898 UBXN4Q92575 508 aa6.49□□□□□ -1.37
SPTBN1-206ENST00000602898 KDM4FA0A1W2PPD8 638 aa6.49□□□□□ -1.37
SPTBN1-206ENST00000602898 MAP3K7O43318 606 aa6.49□□□□□ -1.37
SPTBN1-206ENST00000602898 PCDHGA10Q9Y5H3 936 aa6.49□□□□□ -1.37
SPTBN1-206ENST00000602898 POLA1P09884 1462 aaPredicted RBP6.48□□□□□ -1.37
SPTBN1-206ENST00000602898 TEX14Q8IWB6 1497 aa6.48□□□□□ -1.37
SPTBN1-206ENST00000602898 CNGB1Q14028 1251 aaPredicted RBP6.48□□□□□ -1.37
SPTBN1-206ENST00000602898 CCDC184Q52MB2 194 aa6.48□□□□□ -1.37
SPTBN1-206ENST00000602898 PARP9Q8IXQ6 854 aa6.48□□□□□ -1.37
SPTBN1-206ENST00000602898 WIZO95785 1651 aa6.48□□□□□ -1.37
SPTBN1-206ENST00000602898 POLD1P28340 1107 aa6.48□□□□□ -1.37
SPTBN1-206ENST00000602898 TAGLNQ01995 201 aaKnown RBP6.48□□□□□ -1.37
SPTBN1-206ENST00000602898 KRBA2Q6ZNG9 492 aa6.48□□□□□ -1.37
SPTBN1-206ENST00000602898 GIPC2Q8TF65 315 aa6.48□□□□□ -1.37
SPTBN1-206ENST00000602898 STAC3Q96MF2 364 aa6.48□□□□□ -1.37
SPTBN1-206ENST00000602898 PCDHGA4Q9Y5G9 962 aa6.48□□□□□ -1.37
SPTBN1-206ENST00000602898 UHRF1BP1LA0JNW5 1464 aa6.47□□□□□ -1.37
SPTBN1-206ENST00000602898 CCDC194A0A1B0GVG4 234 aa6.47□□□□□ -1.37
SPTBN1-206ENST00000602898 COG6Q9Y2V7 657 aa6.47□□□□□ -1.37
SPTBN1-206ENST00000602898 POM121CA8CG34 1229 aa6.47□□□□□ -1.37
SPTBN1-206ENST00000602898 U2SURPO15042 1029 aaKnown RBP6.47□□□□□ -1.37
SPTBN1-206ENST00000602898 PHOX2BQ99453 314 aa6.47□□□□□ -1.37
SPTBN1-206ENST00000602898 HOXB3P14651 431 aaPredicted RBP6.46□□□□□ -1.37
SPTBN1-206ENST00000602898 ARMCX6Q7L4S7 300 aa6.46□□□□□ -1.37
SPTBN1-206ENST00000602898 DDRGK1Q96HY6 314 aa6.46□□□□□ -1.37
SPTBN1-206ENST00000602898 CFAP43Q8NDM7 1665 aa6.46□□□□□ -1.37
SPTBN1-206ENST00000602898 CCDC102AQ96A19 550 aa6.46□□□□□ -1.38
SPTBN1-206ENST00000602898 REPIN1Q9BWE0 567 aaKnown RBP6.46□□□□□ -1.38
SPTBN1-206ENST00000602898 G3BP2Q9UN86 482 aaKnown RBP6.46□□□□□ -1.38
SPTBN1-206ENST00000602898 RHBDL3P58872 404 aa6.46□□□□□ -1.38
SPTBN1-206ENST00000602898 MYBPC2Q14324 1141 aa6.46□□□□□ -1.38
SPTBN1-206ENST00000602898 C9orf131Q5VYM1 1079 aa6.46□□□□□ -1.38
SPTBN1-206ENST00000602898 ADCY10Q96PN6 1610 aa6.45□□□□□ -1.38
SPTBN1-206ENST00000602898 SSFA2P28290 1259 aa6.45□□□□□ -1.38
SPTBN1-206ENST00000602898 CLCN6P51797 869 aa6.45□□□□□ -1.38
SPTBN1-206ENST00000602898 ZNF454Q8N9F8 522 aa6.45□□□□□ -1.38
SPTBN1-206ENST00000602898 MARVELD3Q96A59 401 aa6.45□□□□□ -1.38
SPTBN1-206ENST00000602898 FAN1Q9Y2M0 1017 aa6.45□□□□□ -1.38
SPTBN1-206ENST00000602898 ERICH3Q5RHP9 1530 aa6.45□□□□□ -1.38
SPTBN1-206ENST00000602898 ABCA10Q8WWZ4 1543 aa6.45□□□□□ -1.38
SPTBN1-206ENST00000602898 C3orf80F5H4A9 247 aa6.45□□□□□ -1.38
SPTBN1-206ENST00000602898 PSME1Q06323 249 aa6.45□□□□□ -1.38
SPTBN1-206ENST00000602898 LARGE2Q8N3Y3 721 aa6.45□□□□□ -1.38
SPTBN1-206ENST00000602898 TBC1D12O60347 775 aa6.44□□□□□ -1.38
SPTBN1-206ENST00000602898 PHF14O94880 888 aa6.44□□□□□ -1.38
SPTBN1-206ENST00000602898 HSP90AA1P07900 732 aaKnown RBP6.44□□□□□ -1.38
SPTBN1-206ENST00000602898 APLP1P51693 650 aa6.44□□□□□ -1.38
SPTBN1-206ENST00000602898 PTCD2Q8WV60 388 aaKnown RBP6.44□□□□□ -1.38
SPTBN1-206ENST00000602898 CALR3Q96L12 384 aaKnown RBP6.44□□□□□ -1.38
SPTBN1-206ENST00000602898 NPDC1Q9NQX5 325 aaPredicted RBP6.44□□□□□ -1.38
SPTBN1-206ENST00000602898 GRIN2AQ12879 1464 aa6.44□□□□□ -1.38
SPTBN1-206ENST00000602898 LMOD3Q0VAK6 560 aa6.44□□□□□ -1.38
SPTBN1-206ENST00000602898 MAMSTRQ6ZN01 415 aa6.44□□□□□ -1.38
SPTBN1-206ENST00000602898 CREBRFQ8IUR6 639 aa6.44□□□□□ -1.38
SPTBN1-206ENST00000602898 ZC3H6P61129 1189 aaKnown RBP6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 SMYD5Q6GMV2 418 aa6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 TSHZ1Q6ZSZ6 1077 aa6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 BCL2L13Q9BXK5 485 aa6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 ERBB3P21860 1342 aa6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 EPB41L2O43491 1005 aaKnown RBP6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 CCDC181Q5TID7 509 aa6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 GET4Q7L5D6 327 aaPredicted RBP6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 OTUD5Q96G74 571 aa6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 AXIN2Q9Y2T1 843 aa6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 RUSC2Q8N2Y8 1516 aa6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 PCF11O94913 1555 aaKnown RBP6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 DNAJC14Q6Y2X3 702 aaPredicted RBP6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 NLGN1Q8N2Q7 840 aa6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 GLMNQ92990 594 aa6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 ADAM33Q9BZ11 813 aa6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 CHPF2Q9P2E5 772 aa6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 LHX6Q9UPM6 363 aa6.43□□□□□ -1.38
SPTBN1-206ENST00000602898 SMAPO00193 183 aa6.42□□□□□ -1.38
SPTBN1-206ENST00000602898 PPP1R15AO75807 674 aaPredicted RBP6.42□□□□□ -1.38
SPTBN1-206ENST00000602898 PTGDRQ13258 359 aa6.42□□□□□ -1.38
SPTBN1-206ENST00000602898 C11orf96Q7Z7L8 435 aa6.42□□□□□ -1.38
SPTBN1-206ENST00000602898 LNPKQ9C0E8 428 aa6.42□□□□□ -1.38
SPTBN1-206ENST00000602898 METTL14Q9HCE5 456 aaKnown RBP6.42□□□□□ -1.38
SPTBN1-206ENST00000602898 PLB1Q6P1J6 1458 aa6.42□□□□□ -1.38
SPTBN1-206ENST00000602898 hCG_2014768A0A024R1R8 64 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms