RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 CLSPNQ9HAW4 1339 aa31.04■■■□□ 2.56
PPFIA3-208ENST00000602726 CABP1Q9NZU7 370 aa31.02■■■□□ 2.56
PPFIA3-208ENST00000602726 ABCA3Q99758 1704 aa31.01■■■□□ 2.55
PPFIA3-208ENST00000602726 BCL9LQ86UU0 1499 aa31.01■■■□□ 2.55
PPFIA3-208ENST00000602726 CDK12Q9NYV4 1490 aaPredicted RBP31.01■■■□□ 2.55
PPFIA3-208ENST00000602726 ATRNO75882 1429 aa30.99■■■□□ 2.55
PPFIA3-208ENST00000602726 SBNO2Q9Y2G9 1366 aa30.98■■■□□ 2.55
PPFIA3-208ENST00000602726 UNC5CLQ8IV45 518 aa30.97■■■□□ 2.55
PPFIA3-208ENST00000602726 TIMELESSQ9UNS1 1208 aa30.97■■■□□ 2.55
PPFIA3-208ENST00000602726 SLIT2O94813 1529 aa30.97■■■□□ 2.55
PPFIA3-208ENST00000602726 NUTM2GQ5VZR2 741 aa30.95■■■□□ 2.55
PPFIA3-208ENST00000602726 FAM83GA6ND36 823 aa30.94■■■□□ 2.54
PPFIA3-208ENST00000602726 ABTB2Q8N961 1025 aa30.94■■■□□ 2.54
PPFIA3-208ENST00000602726 CCER1Q8TC90 406 aaPredicted RBP30.94■■■□□ 2.54
PPFIA3-208ENST00000602726 ATAD2Q6PL18 1390 aa30.92■■■□□ 2.54
PPFIA3-208ENST00000602726 RGS12O14924 1447 aa30.92■■■□□ 2.54
PPFIA3-208ENST00000602726 BRD4O60885 1362 aaPredicted RBP30.92■■■□□ 2.54
PPFIA3-208ENST00000602726 GJD4Q96KN9 370 aaPredicted RBP30.91■■■□□ 2.54
PPFIA3-208ENST00000602726 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.9■■■□□ 2.54
PPFIA3-208ENST00000602726 USP6P35125 1406 aa30.89■■■□□ 2.53
PPFIA3-208ENST00000602726 PLCH1Q4KWH8 1693 aa30.88■■■□□ 2.53
PPFIA3-208ENST00000602726 CRYBG1Q9Y4K1 1723 aa30.88■■■□□ 2.53
PPFIA3-208ENST00000602726 NWD2Q9ULI1 1742 aa30.87■■■□□ 2.53
PPFIA3-208ENST00000602726 ST20-MTHFSA0A0A6YYL1 179 aa30.87■■■□□ 2.53
PPFIA3-208ENST00000602726 ZNF692Q9BU19 519 aaPredicted RBP30.87■■■□□ 2.53
PPFIA3-208ENST00000602726 NLRP13Q86W25 1043 aa30.86■■■□□ 2.53
PPFIA3-208ENST00000602726 PRDM11Q9NQV5 511 aa30.86■■■□□ 2.53
PPFIA3-208ENST00000602726 BTG4Q9NY30 223 aa30.85■■■□□ 2.53
PPFIA3-208ENST00000602726 VPS72Q15906 364 aa30.84■■■□□ 2.53
PPFIA3-208ENST00000602726 CCDC9Q9Y3X0 531 aaKnown RBP30.84■■■□□ 2.53
PPFIA3-208ENST00000602726 COL14A1Q05707 1796 aaKnown RBP30.84■■■□□ 2.53
PPFIA3-208ENST00000602726 PHRF1Q9P1Y6 1649 aaKnown RBP30.83■■■□□ 2.53
PPFIA3-208ENST00000602726 KIAA0232Q92628 1395 aa30.82■■■□□ 2.52
PPFIA3-208ENST00000602726 SLC24A1O60721 1099 aa30.82■■■□□ 2.52
PPFIA3-208ENST00000602726 ZC3H6P61129 1189 aaKnown RBP30.82■■■□□ 2.52
PPFIA3-208ENST00000602726 TMC1Q8TDI8 760 aa30.81■■■□□ 2.52
PPFIA3-208ENST00000602726 TESK2Q96S53 571 aa30.81■■■□□ 2.52
PPFIA3-208ENST00000602726 USP19O94966 1318 aa30.8■■■□□ 2.52
PPFIA3-208ENST00000602726 NLRP6P59044 892 aa30.8■■■□□ 2.52
PPFIA3-208ENST00000602726 SSH2Q76I76 1423 aa30.8■■■□□ 2.52
PPFIA3-208ENST00000602726 USP47Q96K76 1375 aa30.79■■■□□ 2.52
PPFIA3-208ENST00000602726 PUS7Q96PZ0 661 aaKnown RBP30.79■■■□□ 2.52
PPFIA3-208ENST00000602726 KTN1Q86UP2 1357 aaKnown RBP30.79■■■□□ 2.52
PPFIA3-208ENST00000602726 CHRNA2Q15822 529 aa30.78■■■□□ 2.52
PPFIA3-208ENST00000602726 CPSF1Q10570 1443 aaKnown RBP30.78■■■□□ 2.52
PPFIA3-208ENST00000602726 TTC21BQ7Z4L5 1316 aa30.77■■■□□ 2.52
PPFIA3-208ENST00000602726 AKAP12Q02952 1782 aa30.77■■■□□ 2.52
PPFIA3-208ENST00000602726 GLI3P10071 1580 aa30.77■■■□□ 2.52
PPFIA3-208ENST00000602726 GCP02774 474 aa30.76■■■□□ 2.51
PPFIA3-208ENST00000602726 UPF1Q92900 1129 aaKnown RBP eCLIP30.76■■■□□ 2.51
PPFIA3-208ENST00000602726 SLC12A5Q9H2X9 1139 aa30.75■■■□□ 2.51
PPFIA3-208ENST00000602726 NRKQ7Z2Y5 1582 aa30.75■■■□□ 2.51
PPFIA3-208ENST00000602726 NRAPQ86VF7 1730 aa30.74■■■□□ 2.51
PPFIA3-208ENST00000602726 TTC21AQ8NDW8 1320 aa30.73■■■□□ 2.51
PPFIA3-208ENST00000602726 HDGFL2Q7Z4V5 671 aaPredicted RBP30.73■■■□□ 2.51
PPFIA3-208ENST00000602726 CPDO75976 1380 aa30.72■■■□□ 2.51
PPFIA3-208ENST00000602726 PIK3C2AO00443 1686 aa30.71■■■□□ 2.51
PPFIA3-208ENST00000602726 TMF1P82094 1093 aa30.7■■■□□ 2.51
PPFIA3-208ENST00000602726 TERF2IPQ9NYB0 399 aa30.7■■■□□ 2.51
PPFIA3-208ENST00000602726 STRN4Q9NRL3 753 aa30.69■■■□□ 2.5
PPFIA3-208ENST00000602726 CD163L1Q9NR16 1453 aa30.69■■■□□ 2.5
PPFIA3-208ENST00000602726 MON2Q7Z3U7 1717 aa30.68■■■□□ 2.5
PPFIA3-208ENST00000602726 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.68■■■□□ 2.5
PPFIA3-208ENST00000602726 SEPT12Q8IYM1 358 aa30.68■■■□□ 2.5
PPFIA3-208ENST00000602726 ONECUT3O60422 494 aaPredicted RBP30.67■■■□□ 2.5
PPFIA3-208ENST00000602726 EVA1CP58658 441 aa30.67■■■□□ 2.5
PPFIA3-208ENST00000602726 SPATA31A5Q5VU36 1347 aa30.67■■■□□ 2.5
PPFIA3-208ENST00000602726 SPATA31A7Q8IWB4 1347 aa30.67■■■□□ 2.5
PPFIA3-208ENST00000602726 ZBTB7CA1YPR0 619 aa30.66■■■□□ 2.5
PPFIA3-208ENST00000602726 SLIT3O75094 1523 aa30.66■■■□□ 2.5
PPFIA3-208ENST00000602726 NINLQ9Y2I6 1382 aa30.66■■■□□ 2.5
PPFIA3-208ENST00000602726 A0A0G2JS52 829 aa30.65■■■□□ 2.5
PPFIA3-208ENST00000602726 MYT1Q01538 1121 aa30.65■■■□□ 2.5
PPFIA3-208ENST00000602726 FAM98CQ17RN3 349 aaKnown RBP30.64■■■□□ 2.5
PPFIA3-208ENST00000602726 KCNH5Q8NCM2 988 aa30.64■■■□□ 2.5
PPFIA3-208ENST00000602726 A0A1W2PP64 1363 aa30.63■■■□□ 2.49
PPFIA3-208ENST00000602726 CDCA8Q53HL2 280 aa30.61■■■□□ 2.49
PPFIA3-208ENST00000602726 EDC4Q6P2E9 1401 aaKnown RBP30.61■■■□□ 2.49
PPFIA3-208ENST00000602726 CAMTA1Q9Y6Y1 1673 aa30.61■■■□□ 2.49
PPFIA3-208ENST00000602726 SOX12O15370 315 aa30.6■■■□□ 2.49
PPFIA3-208ENST00000602726 SPATA31A1Q5TZJ5 1347 aa30.59■■■□□ 2.49
PPFIA3-208ENST00000602726 NME9Q86XW9 330 aa30.59■■■□□ 2.49
PPFIA3-208ENST00000602726 LMO7Q8WWI1 1683 aa30.58■■■□□ 2.49
PPFIA3-208ENST00000602726 AATKQ6ZMQ8 1374 aa30.58■■■□□ 2.49
PPFIA3-208ENST00000602726 ZRANB1Q9UGI0 708 aa30.58■■■□□ 2.49
PPFIA3-208ENST00000602726 BRWD3Q6RI45 1802 aa30.58■■■□□ 2.49
PPFIA3-208ENST00000602726 USP31Q70CQ4 1352 aa30.57■■■□□ 2.48
PPFIA3-208ENST00000602726 LARP1Q6PKG0 1096 aaKnown RBP30.56■■■□□ 2.48
PPFIA3-208ENST00000602726 KRT27Q7Z3Y8 459 aa30.56■■■□□ 2.48
PPFIA3-208ENST00000602726 USP35Q9P2H5 1018 aa30.56■■■□□ 2.48
PPFIA3-208ENST00000602726 ARHGEF25Q86VW2 580 aa30.54■■■□□ 2.48
PPFIA3-208ENST00000602726 EP400Q96L91 3159 aa30.54■■■□□ 2.48
PPFIA3-208ENST00000602726 COL5A2P05997 1499 aaPredicted RBP30.52■■■□□ 2.48
PPFIA3-208ENST00000602726 ANKRD36BQ8N2N9 1353 aa30.52■■■□□ 2.48
PPFIA3-208ENST00000602726 EIF4G2P78344 907 aaKnown RBP eCLIP30.51■■■□□ 2.47
PPFIA3-208ENST00000602726 CCDC125Q86Z20 511 aa30.5■■■□□ 2.47
PPFIA3-208ENST00000602726 NFAT5O94916 1531 aa30.5■■■□□ 2.47
PPFIA3-208ENST00000602726 TCP11L2Q8N4U5 519 aa30.49■■■□□ 2.47
PPFIA3-208ENST00000602726 AXIN2Q9Y2T1 843 aa30.49■■■□□ 2.47
PPFIA3-208ENST00000602726 USP54Q70EL1 1684 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms