RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-233ENST00000602421 MSH6P52701 1360 aa24.12■■□□□ 1.45
MACF1-233ENST00000602421 CENPBP07199 599 aaPredicted RBP24.11■■□□□ 1.45
MACF1-233ENST00000602421 CADPS2Q86UW7 1296 aa24.11■■□□□ 1.45
MACF1-233ENST00000602421 LRRC7Q96NW7 1537 aa24.11■■□□□ 1.45
MACF1-233ENST00000602421 KIF20BQ96Q89 1820 aa24.1■■□□□ 1.45
MACF1-233ENST00000602421 TTC21AQ8NDW8 1320 aa24.1■■□□□ 1.45
MACF1-233ENST00000602421 COG3Q96JB2 828 aa24.09■■□□□ 1.45
MACF1-233ENST00000602421 SSH2Q76I76 1423 aa24.08■■□□□ 1.45
MACF1-233ENST00000602421 ANKRD26Q9UPS8 1709 aa24.08■■□□□ 1.45
MACF1-233ENST00000602421 C1orf167Q5SNV9 1468 aa24.08■■□□□ 1.44
MACF1-233ENST00000602421 ORAI2Q96SN7 254 aa24.07■■□□□ 1.44
MACF1-233ENST00000602421 ZRANB1Q9UGI0 708 aa24.06■■□□□ 1.44
MACF1-233ENST00000602421 NRKQ7Z2Y5 1582 aa24.05■■□□□ 1.44
MACF1-233ENST00000602421 MTHFSP49914 203 aa24.05■■□□□ 1.44
MACF1-233ENST00000602421 MST1RQ04912 1400 aa24.05■■□□□ 1.44
MACF1-233ENST00000602421 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
MACF1-233ENST00000602421 PSME1Q06323 249 aa24.04■■□□□ 1.44
MACF1-233ENST00000602421 CFAP53Q96M91 514 aa24.04■■□□□ 1.44
MACF1-233ENST00000602421 HNRNPUQ00839 825 aaKnown RBP eCLIP24.03■■□□□ 1.44
MACF1-233ENST00000602421 WDR43Q15061 677 aaKnown RBP eCLIP24.03■■□□□ 1.44
MACF1-233ENST00000602421 PAK3O75914 559 aaPredicted RBP24.01■■□□□ 1.43
MACF1-233ENST00000602421 XIRP1Q702N8 1843 aaKnown RBP24■■□□□ 1.43
MACF1-233ENST00000602421 FOXO3O43524 673 aa24■■□□□ 1.43
MACF1-233ENST00000602421 AATKQ6ZMQ8 1374 aa23.98■■□□□ 1.43
MACF1-233ENST00000602421 USP31Q70CQ4 1352 aa23.98■■□□□ 1.43
MACF1-233ENST00000602421 OVOS2A0A0J9YW53 1432 aa23.98■■□□□ 1.43
MACF1-233ENST00000602421 OVOS2Q6IE36 1432 aa23.98■■□□□ 1.43
MACF1-233ENST00000602421 KIF1AQ12756 1690 aa23.97■■□□□ 1.43
MACF1-233ENST00000602421 NLRP6P59044 892 aa23.96■■□□□ 1.43
MACF1-233ENST00000602421 ABTB2Q8N961 1025 aa23.96■■□□□ 1.43
MACF1-233ENST00000602421 INSRP06213 1382 aa23.95■■□□□ 1.42
MACF1-233ENST00000602421 POLKQ9UBT6 870 aa23.95■■□□□ 1.42
MACF1-233ENST00000602421 KRT28Q7Z3Y7 464 aa23.94■■□□□ 1.42
MACF1-233ENST00000602421 ADAMTS8Q9UP79 889 aa23.94■■□□□ 1.42
MACF1-233ENST00000602421 FBLN1P23142 703 aa23.93■■□□□ 1.42
MACF1-233ENST00000602421 PPM1GO15355 546 aaPredicted RBP23.93■■□□□ 1.42
MACF1-233ENST00000602421 XPCQ01831 940 aaPredicted RBP23.93■■□□□ 1.42
MACF1-233ENST00000602421 SLAIN2Q9P270 581 aa23.93■■□□□ 1.42
MACF1-233ENST00000602421 NUTM2GQ5VZR2 741 aa23.91■■□□□ 1.42
MACF1-233ENST00000602421 PIK3C2AO00443 1686 aa23.91■■□□□ 1.42
MACF1-233ENST00000602421 NPHP3Q7Z494 1330 aa23.9■■□□□ 1.42
MACF1-233ENST00000602421 RRS1Q15050 365 aaKnown RBP23.9■■□□□ 1.42
MACF1-233ENST00000602421 NUDCQ9Y266 331 aa23.9■■□□□ 1.42
MACF1-233ENST00000602421 EMILIN1Q9Y6C2 1016 aa23.9■■□□□ 1.42
MACF1-233ENST00000602421 PNPLA6Q8IY17 1366 aa23.89■■□□□ 1.41
MACF1-233ENST00000602421 SOX12O15370 315 aa23.88■■□□□ 1.41
MACF1-233ENST00000602421 BLMP54132 1417 aaPredicted RBP23.88■■□□□ 1.41
MACF1-233ENST00000602421 BRINP3Q76B58 766 aa23.88■■□□□ 1.41
MACF1-233ENST00000602421 SMG6Q86US8 1419 aaKnown RBP23.88■■□□□ 1.41
MACF1-233ENST00000602421 DIAPH1O60610 1272 aaKnown RBP23.87■■□□□ 1.41
MACF1-233ENST00000602421 LTBP4Q8N2S1 1624 aa23.87■■□□□ 1.41
MACF1-233ENST00000602421 ZBED9Q6R2W3 1325 aa23.87■■□□□ 1.41
MACF1-233ENST00000602421 LMOD2Q6P5Q4 547 aa23.85■■□□□ 1.41
MACF1-233ENST00000602421 COL3A1P02461 1466 aaPredicted RBP23.85■■□□□ 1.41
MACF1-233ENST00000602421 MAP2P11137 1827 aaKnown RBP23.85■■□□□ 1.41
MACF1-233ENST00000602421 DDX17Q92841 729 aaKnown RBP23.84■■□□□ 1.41
MACF1-233ENST00000602421 CDK12Q9NYV4 1490 aaPredicted RBP23.84■■□□□ 1.41
MACF1-233ENST00000602421 SBNO1A3KN83 1393 aa23.84■■□□□ 1.41
MACF1-233ENST00000602421 USP54Q70EL1 1684 aa23.83■■□□□ 1.41
MACF1-233ENST00000602421 U2SURPO15042 1029 aaKnown RBP23.83■■□□□ 1.4
MACF1-233ENST00000602421 U2AF1L5P0DN76 240 aaPredicted RBP23.83■■□□□ 1.4
MACF1-233ENST00000602421 U2AF1Q01081 240 aaKnown RBP eCLIP23.83■■□□□ 1.4
MACF1-233ENST00000602421 SHPRHQ149N8 1683 aa23.82■■□□□ 1.4
MACF1-233ENST00000602421 TRPM3Q9HCF6 1732 aaPredicted RBP23.81■■□□□ 1.4
MACF1-233ENST00000602421 KCNH5Q8NCM2 988 aa23.81■■□□□ 1.4
MACF1-233ENST00000602421 MAP3K19Q56UN5 1328 aa23.81■■□□□ 1.4
MACF1-233ENST00000602421 SENP3-EIF4A1A0A087X0R7 540 aa23.8■■□□□ 1.4
MACF1-233ENST00000602421 CCDC146Q8IYE0 955 aa23.8■■□□□ 1.4
MACF1-233ENST00000602421 AMPHP49418 695 aa23.79■■□□□ 1.4
MACF1-233ENST00000602421 PXDNQ92626 1479 aa23.77■■□□□ 1.4
MACF1-233ENST00000602421 IL13P35225 146 aa23.77■■□□□ 1.4
MACF1-233ENST00000602421 MARF1Q9Y4F3 1742 aaKnown RBP23.77■■□□□ 1.4
MACF1-233ENST00000602421 RUNDC1Q96C34 613 aa23.76■■□□□ 1.39
MACF1-233ENST00000602421 SALL2Q9Y467 1007 aaPredicted RBP23.76■■□□□ 1.39
MACF1-233ENST00000602421 FLT4P35916 1363 aa23.76■■□□□ 1.39
MACF1-233ENST00000602421 TNS3Q68CZ2 1445 aa23.76■■□□□ 1.39
MACF1-233ENST00000602421 USP19O94966 1318 aa23.75■■□□□ 1.39
MACF1-233ENST00000602421 SPATA31A3Q5VYP0 1347 aa23.75■■□□□ 1.39
MACF1-233ENST00000602421 KIF24Q5T7B8 1368 aa23.75■■□□□ 1.39
MACF1-233ENST00000602421 PNNQ9H307 717 aaKnown RBP23.75■■□□□ 1.39
MACF1-233ENST00000602421 PLEKHG5O94827 1062 aa23.74■■□□□ 1.39
MACF1-233ENST00000602421 GCP02774 474 aa23.74■■□□□ 1.39
MACF1-233ENST00000602421 HSP90AB2PQ58FF8 381 aa23.74■■□□□ 1.39
MACF1-233ENST00000602421 SOS2Q07890 1332 aaPredicted RBP23.74■■□□□ 1.39
MACF1-233ENST00000602421 ARHGEF10O15013 1369 aa23.74■■□□□ 1.39
MACF1-233ENST00000602421 APAF1O14727 1248 aa23.73■■□□□ 1.39
MACF1-233ENST00000602421 SLIT3O75094 1523 aa23.73■■□□□ 1.39
MACF1-233ENST00000602421 ALS2Q96Q42 1657 aa23.73■■□□□ 1.39
MACF1-233ENST00000602421 EIF4A2Q14240 407 aaKnown RBP23.72■■□□□ 1.39
MACF1-233ENST00000602421 PEAK1Q9H792 1746 aa23.72■■□□□ 1.39
MACF1-233ENST00000602421 NFAT5O94916 1531 aa23.71■■□□□ 1.39
MACF1-233ENST00000602421 FCHSD2O94868 740 aa23.71■■□□□ 1.39
MACF1-233ENST00000602421 HOXC9P31274 260 aa23.71■■□□□ 1.39
MACF1-233ENST00000602421 NGEFQ8N5V2 710 aa23.71■■□□□ 1.39
MACF1-233ENST00000602421 RTL1A6NKG5 1358 aa23.7■■□□□ 1.39
MACF1-233ENST00000602421 ZBTB7CA1YPR0 619 aa23.68■■□□□ 1.38
MACF1-233ENST00000602421 IP6K1Q92551 441 aa23.68■■□□□ 1.38
MACF1-233ENST00000602421 MAPK8IP3Q9UPT6 1336 aa23.68■■□□□ 1.38
MACF1-233ENST00000602421 TOM1O60784 492 aa23.67■■□□□ 1.38
MACF1-233ENST00000602421 ARHGEF25Q86VW2 580 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms