RNA–Protein interactions for RNA: ENST00000602291.5

UBE2E3-203, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-203ENST00000602291 ACEP12821 1306 aa13.61□□□□□ -0.23
UBE2E3-203ENST00000602291 EVC2Q86UK5 1308 aa13.61□□□□□ -0.23
UBE2E3-203ENST00000602291 TRPM3Q9HCF6 1732 aaPredicted RBP13.6□□□□□ -0.23
UBE2E3-203ENST00000602291 RALGAPBQ86X10 1494 aa13.6□□□□□ -0.23
UBE2E3-203ENST00000602291 TOPAZ1Q8N9V7 1692 aa13.59□□□□□ -0.23
UBE2E3-203ENST00000602291 POLR3AO14802 1390 aaPredicted RBP13.59□□□□□ -0.23
UBE2E3-203ENST00000602291 PLEKHG3A1L390 1219 aa13.59□□□□□ -0.23
UBE2E3-203ENST00000602291 BCL9LQ86UU0 1499 aa13.59□□□□□ -0.23
UBE2E3-203ENST00000602291 CDK12Q9NYV4 1490 aaPredicted RBP13.59□□□□□ -0.23
UBE2E3-203ENST00000602291 RGS12O14924 1447 aa13.58□□□□□ -0.24
UBE2E3-203ENST00000602291 ATRNO75882 1429 aa13.58□□□□□ -0.24
UBE2E3-203ENST00000602291 NUTM2GQ5VZR2 741 aa13.58□□□□□ -0.24
UBE2E3-203ENST00000602291 MARF1Q9Y4F3 1742 aaKnown RBP13.58□□□□□ -0.24
UBE2E3-203ENST00000602291 ALS2Q96Q42 1657 aa13.57□□□□□ -0.24
UBE2E3-203ENST00000602291 UNC5CLQ8IV45 518 aa13.57□□□□□ -0.24
UBE2E3-203ENST00000602291 CABP1Q9NZU7 370 aa13.57□□□□□ -0.24
UBE2E3-203ENST00000602291 ABCA3Q99758 1704 aa13.56□□□□□ -0.24
UBE2E3-203ENST00000602291 SLIT2O94813 1529 aa13.56□□□□□ -0.24
UBE2E3-203ENST00000602291 FAM83GA6ND36 823 aa13.55□□□□□ -0.24
UBE2E3-203ENST00000602291 CCDC9Q9Y3X0 531 aaKnown RBP13.55□□□□□ -0.24
UBE2E3-203ENST00000602291 ABTB2Q8N961 1025 aa13.54□□□□□ -0.24
UBE2E3-203ENST00000602291 GJD4Q96KN9 370 aaPredicted RBP13.54□□□□□ -0.24
UBE2E3-203ENST00000602291 PRDM11Q9NQV5 511 aa13.54□□□□□ -0.24
UBE2E3-203ENST00000602291 RNF216Q9NWF9 866 aaPredicted RBP13.54□□□□□ -0.24
UBE2E3-203ENST00000602291 ZC3H6P61129 1189 aaKnown RBP13.52□□□□□ -0.25
UBE2E3-203ENST00000602291 BTG4Q9NY30 223 aa13.52□□□□□ -0.25
UBE2E3-203ENST00000602291 ATAD2Q6PL18 1390 aa13.52□□□□□ -0.25
UBE2E3-203ENST00000602291 SBNO2Q9Y2G9 1366 aa13.52□□□□□ -0.25
UBE2E3-203ENST00000602291 USP6P35125 1406 aa13.52□□□□□ -0.25
UBE2E3-203ENST00000602291 PLCH1Q4KWH8 1693 aa13.52□□□□□ -0.25
UBE2E3-203ENST00000602291 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.51□□□□□ -0.25
UBE2E3-203ENST00000602291 KIAA0232Q92628 1395 aa13.51□□□□□ -0.25
UBE2E3-203ENST00000602291 VPS72Q15906 364 aa13.51□□□□□ -0.25
UBE2E3-203ENST00000602291 CCER1Q8TC90 406 aaPredicted RBP13.51□□□□□ -0.25
UBE2E3-203ENST00000602291 UPF1Q92900 1129 aaKnown RBP eCLIP13.51□□□□□ -0.25
UBE2E3-203ENST00000602291 BRD4O60885 1362 aaPredicted RBP13.5□□□□□ -0.25
UBE2E3-203ENST00000602291 CLSPNQ9HAW4 1339 aa13.5□□□□□ -0.25
UBE2E3-203ENST00000602291 CHRNA2Q15822 529 aa13.5□□□□□ -0.25
UBE2E3-203ENST00000602291 NLRP13Q86W25 1043 aa13.5□□□□□ -0.25
UBE2E3-203ENST00000602291 TMC1Q8TDI8 760 aa13.5□□□□□ -0.25
UBE2E3-203ENST00000602291 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
UBE2E3-203ENST00000602291 A0A0G2JS52 829 aa13.49□□□□□ -0.25
UBE2E3-203ENST00000602291 NLRP6P59044 892 aa13.49□□□□□ -0.25
UBE2E3-203ENST00000602291 MYT1Q01538 1121 aa13.49□□□□□ -0.25
UBE2E3-203ENST00000602291 COL14A1Q05707 1796 aaKnown RBP13.49□□□□□ -0.25
UBE2E3-203ENST00000602291 NWD2Q9ULI1 1742 aa13.49□□□□□ -0.25
UBE2E3-203ENST00000602291 CRYBG1Q9Y4K1 1723 aa13.49□□□□□ -0.25
UBE2E3-203ENST00000602291 PHRF1Q9P1Y6 1649 aaKnown RBP13.49□□□□□ -0.25
UBE2E3-203ENST00000602291 GLI3P10071 1580 aa13.49□□□□□ -0.25
UBE2E3-203ENST00000602291 USP19O94966 1318 aa13.48□□□□□ -0.25
UBE2E3-203ENST00000602291 ZBTB7CA1YPR0 619 aa13.48□□□□□ -0.25
UBE2E3-203ENST00000602291 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
UBE2E3-203ENST00000602291 KTN1Q86UP2 1357 aaKnown RBP13.47□□□□□ -0.25
UBE2E3-203ENST00000602291 STRN4Q9NRL3 753 aa13.47□□□□□ -0.25
UBE2E3-203ENST00000602291 TIMELESSQ9UNS1 1208 aa13.47□□□□□ -0.25
UBE2E3-203ENST00000602291 USP47Q96K76 1375 aa13.46□□□□□ -0.25
UBE2E3-203ENST00000602291 NRKQ7Z2Y5 1582 aa13.46□□□□□ -0.25
UBE2E3-203ENST00000602291 TTC21BQ7Z4L5 1316 aa13.46□□□□□ -0.25
UBE2E3-203ENST00000602291 GCP02774 474 aa13.46□□□□□ -0.25
UBE2E3-203ENST00000602291 SEPT12Q8IYM1 358 aa13.46□□□□□ -0.25
UBE2E3-203ENST00000602291 SSH2Q76I76 1423 aa13.46□□□□□ -0.26
UBE2E3-203ENST00000602291 FAM98CQ17RN3 349 aaKnown RBP13.45□□□□□ -0.26
UBE2E3-203ENST00000602291 HDGFL2Q7Z4V5 671 aaPredicted RBP13.45□□□□□ -0.26
UBE2E3-203ENST00000602291 TESK2Q96S53 571 aa13.45□□□□□ -0.26
UBE2E3-203ENST00000602291 CPSF1Q10570 1443 aaKnown RBP13.45□□□□□ -0.26
UBE2E3-203ENST00000602291 NRAPQ86VF7 1730 aa13.44□□□□□ -0.26
UBE2E3-203ENST00000602291 TTC21AQ8NDW8 1320 aa13.44□□□□□ -0.26
UBE2E3-203ENST00000602291 SOX12O15370 315 aa13.44□□□□□ -0.26
UBE2E3-203ENST00000602291 EVA1CP58658 441 aa13.44□□□□□ -0.26
UBE2E3-203ENST00000602291 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.44□□□□□ -0.26
UBE2E3-203ENST00000602291 SLC12A5Q9H2X9 1139 aa13.44□□□□□ -0.26
UBE2E3-203ENST00000602291 CPDO75976 1380 aa13.44□□□□□ -0.26
UBE2E3-203ENST00000602291 SLC24A1O60721 1099 aa13.43□□□□□ -0.26
UBE2E3-203ENST00000602291 TERF2IPQ9NYB0 399 aa13.43□□□□□ -0.26
UBE2E3-203ENST00000602291 PIK3C2AO00443 1686 aa13.43□□□□□ -0.26
UBE2E3-203ENST00000602291 SPATA31A5Q5VU36 1347 aa13.42□□□□□ -0.26
UBE2E3-203ENST00000602291 SPATA31A7Q8IWB4 1347 aa13.42□□□□□ -0.26
UBE2E3-203ENST00000602291 USP35Q9P2H5 1018 aa13.42□□□□□ -0.26
UBE2E3-203ENST00000602291 AKAP12Q02952 1782 aa13.42□□□□□ -0.26
UBE2E3-203ENST00000602291 SLIT3O75094 1523 aa13.41□□□□□ -0.26
UBE2E3-203ENST00000602291 ONECUT3O60422 494 aaPredicted RBP13.41□□□□□ -0.26
UBE2E3-203ENST00000602291 TMF1P82094 1093 aa13.41□□□□□ -0.26
UBE2E3-203ENST00000602291 CACNB1Q02641 598 aaPredicted RBP13.41□□□□□ -0.26
UBE2E3-203ENST00000602291 PUS7Q96PZ0 661 aaKnown RBP13.41□□□□□ -0.26
UBE2E3-203ENST00000602291 CD163L1Q9NR16 1453 aa13.41□□□□□ -0.26
UBE2E3-203ENST00000602291 LARP1Q6PKG0 1096 aaKnown RBP13.4□□□□□ -0.26
UBE2E3-203ENST00000602291 KRT27Q7Z3Y8 459 aa13.4□□□□□ -0.26
UBE2E3-203ENST00000602291 NME9Q86XW9 330 aa13.4□□□□□ -0.26
UBE2E3-203ENST00000602291 KCNH5Q8NCM2 988 aa13.4□□□□□ -0.26
UBE2E3-203ENST00000602291 A0A1W2PP64 1363 aa13.4□□□□□ -0.26
UBE2E3-203ENST00000602291 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
UBE2E3-203ENST00000602291 SPATA31A1Q5TZJ5 1347 aa13.39□□□□□ -0.27
UBE2E3-203ENST00000602291 ZRANB1Q9UGI0 708 aa13.39□□□□□ -0.27
UBE2E3-203ENST00000602291 NINLQ9Y2I6 1382 aa13.39□□□□□ -0.27
UBE2E3-203ENST00000602291 MON2Q7Z3U7 1717 aa13.39□□□□□ -0.27
UBE2E3-203ENST00000602291 EDC4Q6P2E9 1401 aaKnown RBP13.39□□□□□ -0.27
UBE2E3-203ENST00000602291 AATKQ6ZMQ8 1374 aa13.38□□□□□ -0.27
UBE2E3-203ENST00000602291 NCBP3Q53F19 620 aaKnown RBP13.38□□□□□ -0.27
UBE2E3-203ENST00000602291 LMO7Q8WWI1 1683 aa13.37□□□□□ -0.27
UBE2E3-203ENST00000602291 COL5A2P05997 1499 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms